RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 AKAP12Q02952 1782 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
TMEM116-218ENST00000552839 DDB1Q16531 1140 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 PROM2Q8N271 834 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
TMEM116-218ENST00000552839 SLIT3O75094 1523 aa16.09■□□□□ 0.17
TMEM116-218ENST00000552839 NLRP6P59044 892 aa16.09■□□□□ 0.17
TMEM116-218ENST00000552839 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
TMEM116-218ENST00000552839 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
TMEM116-218ENST00000552839 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
TMEM116-218ENST00000552839 MYOM1P52179 1685 aa16.08■□□□□ 0.17
TMEM116-218ENST00000552839 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
TMEM116-218ENST00000552839 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
TMEM116-218ENST00000552839 USP6P35125 1406 aa16.08■□□□□ 0.16
TMEM116-218ENST00000552839 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
TMEM116-218ENST00000552839 MARCH10Q8NA82 808 aaPredicted RBP16.07■□□□□ 0.16
TMEM116-218ENST00000552839 AXIN2Q9Y2T1 843 aa16.07■□□□□ 0.16
TMEM116-218ENST00000552839 PIK3C2AO00443 1686 aa16.06■□□□□ 0.16
TMEM116-218ENST00000552839 QRICH2Q9H0J4 1663 aa16.06■□□□□ 0.16
TMEM116-218ENST00000552839 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
TMEM116-218ENST00000552839 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
TMEM116-218ENST00000552839 PTGER2P43116 358 aa16.06■□□□□ 0.16
TMEM116-218ENST00000552839 CABP1Q9NZU7 370 aa16.06■□□□□ 0.16
TMEM116-218ENST00000552839 BCL9O00512 1426 aa16.05■□□□□ 0.16
TMEM116-218ENST00000552839 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
TMEM116-218ENST00000552839 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
TMEM116-218ENST00000552839 CHD4Q14839 1912 aa16.04■□□□□ 0.16
TMEM116-218ENST00000552839 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
TMEM116-218ENST00000552839 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
TMEM116-218ENST00000552839 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
TMEM116-218ENST00000552839 CDCA7Q9BWT1 371 aaPredicted RBP16.02■□□□□ 0.16
TMEM116-218ENST00000552839 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.15
TMEM116-218ENST00000552839 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
TMEM116-218ENST00000552839 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
TMEM116-218ENST00000552839 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
TMEM116-218ENST00000552839 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
TMEM116-218ENST00000552839 CARD10Q9BWT7 1032 aa16■□□□□ 0.15
TMEM116-218ENST00000552839 FHDC1Q9C0D6 1143 aaPredicted RBP16■□□□□ 0.15
TMEM116-218ENST00000552839 EXOC5O00471 708 aa15.99■□□□□ 0.15
TMEM116-218ENST00000552839 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
TMEM116-218ENST00000552839 SOX12O15370 315 aa15.98■□□□□ 0.15
TMEM116-218ENST00000552839 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
TMEM116-218ENST00000552839 SGIP1Q9BQI5 828 aa15.98■□□□□ 0.15
TMEM116-218ENST00000552839 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
TMEM116-218ENST00000552839 KCNH5Q8NCM2 988 aa15.97■□□□□ 0.15
TMEM116-218ENST00000552839 MTFR1LQ9H019 292 aa15.97■□□□□ 0.15
TMEM116-218ENST00000552839 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
TMEM116-218ENST00000552839 KAT6BQ8WYB5 2073 aa15.97■□□□□ 0.15
TMEM116-218ENST00000552839 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
TMEM116-218ENST00000552839 NFAT5O94916 1531 aa15.95■□□□□ 0.14
TMEM116-218ENST00000552839 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
TMEM116-218ENST00000552839 CCDC7Q96M83 1385 aa15.95■□□□□ 0.14
TMEM116-218ENST00000552839 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
TMEM116-218ENST00000552839 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
TMEM116-218ENST00000552839 BTAF1O14981 1849 aa15.94■□□□□ 0.14
TMEM116-218ENST00000552839 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
TMEM116-218ENST00000552839 TTC21AQ8NDW8 1320 aa15.93■□□□□ 0.14
TMEM116-218ENST00000552839 ARXQ96QS3 562 aa15.92■□□□□ 0.14
TMEM116-218ENST00000552839 UTRNP46939 3433 aa15.91■□□□□ 0.14
TMEM116-218ENST00000552839 ABCC6O95255 1503 aa15.91■□□□□ 0.14
TMEM116-218ENST00000552839 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
TMEM116-218ENST00000552839 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
TMEM116-218ENST00000552839 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
TMEM116-218ENST00000552839 LTN1O94822 1766 aa15.9■□□□□ 0.14
TMEM116-218ENST00000552839 USP47Q96K76 1375 aa15.89■□□□□ 0.13
TMEM116-218ENST00000552839 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
TMEM116-218ENST00000552839 ZNF827Q17R98 1081 aa15.89■□□□□ 0.13
TMEM116-218ENST00000552839 KTN1Q86UP2 1357 aaKnown RBP15.88■□□□□ 0.13
TMEM116-218ENST00000552839 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
TMEM116-218ENST00000552839 ERBB3P21860 1342 aa15.88■□□□□ 0.13
TMEM116-218ENST00000552839 USP54Q70EL1 1684 aa15.87■□□□□ 0.13
TMEM116-218ENST00000552839 IL2RBP14784 551 aa15.87■□□□□ 0.13
TMEM116-218ENST00000552839 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
TMEM116-218ENST00000552839 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
TMEM116-218ENST00000552839 QSER1Q2KHR3 1735 aa15.87■□□□□ 0.13
TMEM116-218ENST00000552839 COL24A1Q17RW2 1714 aa15.86■□□□□ 0.13
TMEM116-218ENST00000552839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
TMEM116-218ENST00000552839 TUBGCP6Q96RT7 1819 aa15.85■□□□□ 0.13
TMEM116-218ENST00000552839 GPR162Q16538 588 aa15.85■□□□□ 0.13
TMEM116-218ENST00000552839 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
TMEM116-218ENST00000552839 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
TMEM116-218ENST00000552839 NME9Q86XW9 330 aa15.83■□□□□ 0.12
TMEM116-218ENST00000552839 ANKRD24Q8TF21 1146 aa15.83■□□□□ 0.12
TMEM116-218ENST00000552839 KLHL34Q8N239 644 aa15.82■□□□□ 0.12
TMEM116-218ENST00000552839 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
TMEM116-218ENST00000552839 CD163L1Q9NR16 1453 aa15.82■□□□□ 0.12
TMEM116-218ENST00000552839 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
TMEM116-218ENST00000552839 SBNO2Q9Y2G9 1366 aa15.81■□□□□ 0.12
TMEM116-218ENST00000552839 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
TMEM116-218ENST00000552839 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
TMEM116-218ENST00000552839 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
TMEM116-218ENST00000552839 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
TMEM116-218ENST00000552839 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
TMEM116-218ENST00000552839 POLD1P28340 1107 aa15.79■□□□□ 0.12
TMEM116-218ENST00000552839 KCNQ4P56696 695 aa15.79■□□□□ 0.12
TMEM116-218ENST00000552839 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
TMEM116-218ENST00000552839 DDX54Q8TDD1 881 aaKnown RBP15.79■□□□□ 0.12
TMEM116-218ENST00000552839 LY75O60449 1722 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms