RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 CHIC2Q9UKJ5 165 aa9.27□□□□□ -0.93
AC087897.2-201ENST00000552639 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 ATG7O95352 703 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 RPIAP49247 311 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 WNT7BP56706 349 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 CDV3Q9UKY7 258 aaKnown RBP9.26□□□□□ -0.93
AC087897.2-201ENST00000552639 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
AC087897.2-201ENST00000552639 KANK4Q5T7N3 995 aaPredicted RBP9.25□□□□□ -0.93
AC087897.2-201ENST00000552639 TRMT44Q8IYL2 757 aaKnown RBP9.25□□□□□ -0.93
AC087897.2-201ENST00000552639 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
AC087897.2-201ENST00000552639 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
AC087897.2-201ENST00000552639 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
AC087897.2-201ENST00000552639 RNF20Q5VTR2 975 aa9.24□□□□□ -0.93
AC087897.2-201ENST00000552639 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
AC087897.2-201ENST00000552639 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
AC087897.2-201ENST00000552639 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
AC087897.2-201ENST00000552639 GIGYF1O75420 1035 aaPredicted RBP9.22□□□□□ -0.93
AC087897.2-201ENST00000552639 CD2BP2O95400 341 aaKnown RBP9.22□□□□□ -0.93
AC087897.2-201ENST00000552639 SKOR1P84550 965 aa9.22□□□□□ -0.93
AC087897.2-201ENST00000552639 NCOA4Q13772 614 aa9.22□□□□□ -0.93
AC087897.2-201ENST00000552639 CCDC125Q86Z20 511 aa9.22□□□□□ -0.93
AC087897.2-201ENST00000552639 TRIM26Q12899 539 aaPredicted RBP9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 EML3Q32P44 896 aa9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
AC087897.2-201ENST00000552639 ESPNB1AK53 854 aa9.2□□□□□ -0.94
AC087897.2-201ENST00000552639 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
AC087897.2-201ENST00000552639 GFRA3O60609 400 aa9.2□□□□□ -0.94
AC087897.2-201ENST00000552639 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
AC087897.2-201ENST00000552639 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
AC087897.2-201ENST00000552639 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
AC087897.2-201ENST00000552639 TSGA10IPQ3SY00 556 aa9.19□□□□□ -0.94
AC087897.2-201ENST00000552639 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
AC087897.2-201ENST00000552639 MAP4K5Q9Y4K4 846 aa9.19□□□□□ -0.94
AC087897.2-201ENST00000552639 ZBTB7CA1YPR0 619 aa9.18□□□□□ -0.94
AC087897.2-201ENST00000552639 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
AC087897.2-201ENST00000552639 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
AC087897.2-201ENST00000552639 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
AC087897.2-201ENST00000552639 NOD1Q9Y239 953 aa9.18□□□□□ -0.94
AC087897.2-201ENST00000552639 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
AC087897.2-201ENST00000552639 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
AC087897.2-201ENST00000552639 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
AC087897.2-201ENST00000552639 RASA1P20936 1047 aa9.16□□□□□ -0.94
AC087897.2-201ENST00000552639 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
AC087897.2-201ENST00000552639 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
AC087897.2-201ENST00000552639 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
AC087897.2-201ENST00000552639 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L21D6R901 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 USP4Q13107 963 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 PTK7Q13308 1070 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 CRTC2Q53ET0 693 aaPredicted RBP9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 MPNDQ8N594 471 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 CDK15Q96Q40 435 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
AC087897.2-201ENST00000552639 SLC19A1P41440 591 aa9.14□□□□□ -0.95
AC087897.2-201ENST00000552639 OGFOD1Q8N543 542 aa9.14□□□□□ -0.95
AC087897.2-201ENST00000552639 ZMIZ1Q9ULJ6 1067 aa9.14□□□□□ -0.95
AC087897.2-201ENST00000552639 INTS6LQ5JSJ4 861 aaKnown RBP9.13□□□□□ -0.95
AC087897.2-201ENST00000552639 AEBP1Q8IUX7 1158 aa9.13□□□□□ -0.95
AC087897.2-201ENST00000552639 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
AC087897.2-201ENST00000552639 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
AC087897.2-201ENST00000552639 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
AC087897.2-201ENST00000552639 WNT7AO00755 349 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 SIAH2O43255 324 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 BRD1O95696 1058 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 GTF2IP78347 998 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 CLDN10P78369 228 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 TMEM164Q5U3C3 297 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 STK32AQ8WU08 396 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
AC087897.2-201ENST00000552639 PATL2C9JE40 543 aaKnown RBP9.11□□□□□ -0.95
AC087897.2-201ENST00000552639 ERVH48-1M5A8F1 160 aa9.11□□□□□ -0.95
AC087897.2-201ENST00000552639 RAB15P59190 212 aa9.11□□□□□ -0.95
AC087897.2-201ENST00000552639 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
AC087897.2-201ENST00000552639 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms