RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 USP17L3A6NCW0 530 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 USP17L4A6NCW7 530 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 PRR20EP86478 221 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 PRR20CP86479 221 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 PRR20DP86480 221 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 PRR20BP86481 221 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 PRR20AP86496 221 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
CUX2-203ENST00000551604 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 USP17L2Q6R6M4 530 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 USP17L1Q7RTZ2 530 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
CUX2-203ENST00000551604 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
CUX2-203ENST00000551604 USP17L5A8MUK1 530 aa8.71□□□□□ -1.02
CUX2-203ENST00000551604 GDF9O60383 454 aa8.71□□□□□ -1.02
CUX2-203ENST00000551604 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
CUX2-203ENST00000551604 CARNS1A5YM72 827 aa8.7□□□□□ -1.02
CUX2-203ENST00000551604 FAM196BA6NMK8 535 aa8.7□□□□□ -1.02
CUX2-203ENST00000551604 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
CUX2-203ENST00000551604 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
CUX2-203ENST00000551604 LARP1Q6PKG0 1096 aaKnown RBP8.7□□□□□ -1.02
CUX2-203ENST00000551604 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
CUX2-203ENST00000551604 NOVA2Q9UNW9 492 aaKnown RBP8.7□□□□□ -1.02
CUX2-203ENST00000551604 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
CUX2-203ENST00000551604 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
CUX2-203ENST00000551604 FOXC1Q12948 553 aa8.69□□□□□ -1.02
CUX2-203ENST00000551604 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
CUX2-203ENST00000551604 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
CUX2-203ENST00000551604 RBM25P49756 843 aaKnown RBP8.68□□□□□ -1.02
CUX2-203ENST00000551604 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
CUX2-203ENST00000551604 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
CUX2-203ENST00000551604 THAP11Q96EK4 314 aa8.68□□□□□ -1.02
CUX2-203ENST00000551604 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
CUX2-203ENST00000551604 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 RNF135Q8IUD6 432 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 SPSB2Q99619 263 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
CUX2-203ENST00000551604 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
CUX2-203ENST00000551604 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L10C9JJH3 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L21D6R901 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 FAM200AQ8TCP9 573 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 CEP126Q9P2H0 1117 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 ZMIZ1Q9ULJ6 1067 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 PCDHB9Q9Y5E1 797 aa8.66□□□□□ -1.02
CUX2-203ENST00000551604 E9PSI1 815 aa8.65□□□□□ -1.02
CUX2-203ENST00000551604 RASA1P20936 1047 aa8.65□□□□□ -1.02
CUX2-203ENST00000551604 ARID4AP29374 1257 aaPredicted RBP8.65□□□□□ -1.02
CUX2-203ENST00000551604 EML3Q32P44 896 aa8.65□□□□□ -1.02
CUX2-203ENST00000551604 TRIM50Q86XT4 487 aa8.65□□□□□ -1.02
CUX2-203ENST00000551604 AAASQ9NRG9 546 aa8.65□□□□□ -1.02
CUX2-203ENST00000551604 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
CUX2-203ENST00000551604 ATP1A2P50993 1020 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 NCOA4Q13772 614 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
CUX2-203ENST00000551604 PKD2L1Q9P0L9 805 aa8.64□□□□□ -1.03
CUX2-203ENST00000551604 ZBTB33Q86T24 672 aa8.63□□□□□ -1.03
CUX2-203ENST00000551604 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
CUX2-203ENST00000551604 ARHGAP9Q9BRR9 750 aa8.63□□□□□ -1.03
CUX2-203ENST00000551604 MMP16P51512 607 aa8.62□□□□□ -1.03
CUX2-203ENST00000551604 PTK7Q13308 1070 aa8.62□□□□□ -1.03
CUX2-203ENST00000551604 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
CUX2-203ENST00000551604 ERCC3P19447 782 aa8.61□□□□□ -1.03
CUX2-203ENST00000551604 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
CUX2-203ENST00000551604 CRTC2Q53ET0 693 aaPredicted RBP8.61□□□□□ -1.03
CUX2-203ENST00000551604 ANKMY2Q8IV38 441 aa8.61□□□□□ -1.03
CUX2-203ENST00000551604 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
CUX2-203ENST00000551604 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
CUX2-203ENST00000551604 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
CUX2-203ENST00000551604 SSFA2P28290 1259 aa8.6□□□□□ -1.03
CUX2-203ENST00000551604 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
CUX2-203ENST00000551604 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
CUX2-203ENST00000551604 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
CUX2-203ENST00000551604 ADAM32Q8TC27 787 aa8.6□□□□□ -1.03
CUX2-203ENST00000551604 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
CUX2-203ENST00000551604 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
CUX2-203ENST00000551604 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
CUX2-203ENST00000551604 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
CUX2-203ENST00000551604 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
CUX2-203ENST00000551604 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
CUX2-203ENST00000551604 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
CUX2-203ENST00000551604 ATP2B4P23634 1241 aa8.57□□□□□ -1.04
CUX2-203ENST00000551604 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms