RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
LETMD1-225ENST00000550715 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
LETMD1-225ENST00000550715 DEFB132Q7Z7B7 95 aa12.31□□□□□ -0.44
LETMD1-225ENST00000550715 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
LETMD1-225ENST00000550715 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
LETMD1-225ENST00000550715 ERBB3P21860 1342 aa12.31□□□□□ -0.44
LETMD1-225ENST00000550715 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
LETMD1-225ENST00000550715 RTEL1-TNFRSF6BF6WH68 1400 aa12.3□□□□□ -0.44
LETMD1-225ENST00000550715 ST18O60284 1047 aa12.3□□□□□ -0.44
LETMD1-225ENST00000550715 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 PSEN2P49810 448 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 LRP5O75197 1615 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 TMEM2Q9UHN6 1383 aa12.29□□□□□ -0.44
LETMD1-225ENST00000550715 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 HRCP23327 699 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
LETMD1-225ENST00000550715 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 PNMA3Q9UL41 463 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
LETMD1-225ENST00000550715 TET3O43151 1660 aa12.28□□□□□ -0.44
LETMD1-225ENST00000550715 EMP3P54852 163 aa12.27□□□□□ -0.45
LETMD1-225ENST00000550715 C14orf37Q86TY3 774 aa12.27□□□□□ -0.45
LETMD1-225ENST00000550715 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
LETMD1-225ENST00000550715 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 SMAPO00193 183 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 EYA1Q99502 592 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 USP21Q9UK80 565 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
LETMD1-225ENST00000550715 ABCC3O15438 1527 aa12.26□□□□□ -0.45
LETMD1-225ENST00000550715 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
LETMD1-225ENST00000550715 ATF3P18847 181 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 DDX17Q92841 729 aaKnown RBP12.24□□□□□ -0.45
LETMD1-225ENST00000550715 TATDN2Q93075 761 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
LETMD1-225ENST00000550715 BEGAINQ9BUH8 593 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 C19orf44Q9H6X5 657 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 TRPC5Q9UL62 973 aaPredicted RBP12.24□□□□□ -0.45
LETMD1-225ENST00000550715 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
LETMD1-225ENST00000550715 KDM5AP29375 1690 aaKnown RBP12.23□□□□□ -0.45
LETMD1-225ENST00000550715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
LETMD1-225ENST00000550715 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
LETMD1-225ENST00000550715 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
LETMD1-225ENST00000550715 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
LETMD1-225ENST00000550715 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
LETMD1-225ENST00000550715 NWD1Q149M9 1564 aa12.22□□□□□ -0.45
LETMD1-225ENST00000550715 MAST1Q9Y2H9 1570 aa12.22□□□□□ -0.45
LETMD1-225ENST00000550715 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
LETMD1-225ENST00000550715 IDI1Q13907 227 aa12.21□□□□□ -0.45
LETMD1-225ENST00000550715 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
LETMD1-225ENST00000550715 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
LETMD1-225ENST00000550715 CASKIN1Q8WXD9 1431 aa12.2□□□□□ -0.46
LETMD1-225ENST00000550715 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
LETMD1-225ENST00000550715 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-225ENST00000550715 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
LETMD1-225ENST00000550715 BLMP54132 1417 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-225ENST00000550715 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
LETMD1-225ENST00000550715 ARHGAP33O14559 1287 aa12.19□□□□□ -0.46
LETMD1-225ENST00000550715 DNAJB2P25686 324 aa12.19□□□□□ -0.46
LETMD1-225ENST00000550715 ATRNO75882 1429 aa12.18□□□□□ -0.46
LETMD1-225ENST00000550715 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
LETMD1-225ENST00000550715 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
LETMD1-225ENST00000550715 PIK3C2BO00750 1634 aa12.17□□□□□ -0.46
LETMD1-225ENST00000550715 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
LETMD1-225ENST00000550715 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
LETMD1-225ENST00000550715 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
LETMD1-225ENST00000550715 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-225ENST00000550715 SEPT9Q9UHD8 586 aaPredicted RBP12.16□□□□□ -0.46
LETMD1-225ENST00000550715 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
LETMD1-225ENST00000550715 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.46
LETMD1-225ENST00000550715 EEA1Q15075 1411 aa12.15□□□□□ -0.46
LETMD1-225ENST00000550715 SF3B2Q13435 895 aaKnown RBP12.15□□□□□ -0.46
LETMD1-225ENST00000550715 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
LETMD1-225ENST00000550715 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
LETMD1-225ENST00000550715 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
LETMD1-225ENST00000550715 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-225ENST00000550715 R3HDM1Q15032 1099 aaKnown RBP12.14□□□□□ -0.47
LETMD1-225ENST00000550715 GJD4Q96KN9 370 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-225ENST00000550715 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
LETMD1-225ENST00000550715 EFCAB6Q5THR3 1501 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
LETMD1-225ENST00000550715 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 PBX2P40425 430 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 RABGEF1Q9UJ41 708 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 CCDC141Q6ZP82 1450 aa12.12□□□□□ -0.47
LETMD1-225ENST00000550715 CEP152O94986 1710 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms