RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.66
KRT18-207ENST00000550600 LMOD3Q0VAK6 560 aa25.39■■□□□ 1.65
KRT18-207ENST00000550600 PEAK1Q9H792 1746 aa25.38■■□□□ 1.65
KRT18-207ENST00000550600 HMOX1P09601 288 aa25.38■■□□□ 1.65
KRT18-207ENST00000550600 CT47B1P0C2W7 299 aaPredicted RBP25.38■■□□□ 1.65
KRT18-207ENST00000550600 ORAI2Q96SN7 254 aa25.38■■□□□ 1.65
KRT18-207ENST00000550600 TRIM35Q9UPQ4 493 aa25.38■■□□□ 1.65
KRT18-207ENST00000550600 DMRT2Q9Y5R5 561 aa25.38■■□□□ 1.65
KRT18-207ENST00000550600 MARF1Q9Y4F3 1742 aaKnown RBP25.37■■□□□ 1.65
KRT18-207ENST00000550600 RTL1A6NKG5 1358 aa25.37■■□□□ 1.65
KRT18-207ENST00000550600 MSH6P52701 1360 aa25.37■■□□□ 1.65
KRT18-207ENST00000550600 HSP90AB2PQ58FF8 381 aa25.36■■□□□ 1.65
KRT18-207ENST00000550600 ARHGEF10O15013 1369 aa25.35■■□□□ 1.65
KRT18-207ENST00000550600 MST1RQ04912 1400 aa25.35■■□□□ 1.65
KRT18-207ENST00000550600 SOX12O15370 315 aa25.34■■□□□ 1.65
KRT18-207ENST00000550600 FOXO3O43524 673 aa25.34■■□□□ 1.65
KRT18-207ENST00000550600 KRT28Q7Z3Y7 464 aa25.32■■□□□ 1.64
KRT18-207ENST00000550600 RGPD1P0DJD0 1748 aa25.32■■□□□ 1.64
KRT18-207ENST00000550600 NUTM2GQ5VZR2 741 aa25.32■■□□□ 1.64
KRT18-207ENST00000550600 SULT6B1Q6IMI4 303 aa25.31■■□□□ 1.64
KRT18-207ENST00000550600 PHACTR3Q96KR7 559 aa25.31■■□□□ 1.64
KRT18-207ENST00000550600 HOXC9P31274 260 aa25.3■■□□□ 1.64
KRT18-207ENST00000550600 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
KRT18-207ENST00000550600 NFAT5O94916 1531 aa25.27■■□□□ 1.64
KRT18-207ENST00000550600 IP6K1Q92551 441 aa25.27■■□□□ 1.64
KRT18-207ENST00000550600 KDRP35968 1356 aa25.27■■□□□ 1.64
KRT18-207ENST00000550600 NPHP3Q7Z494 1330 aa25.26■■□□□ 1.63
KRT18-207ENST00000550600 IGSF1Q8N6C5 1336 aa25.26■■□□□ 1.63
KRT18-207ENST00000550600 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
KRT18-207ENST00000550600 SLIT3O75094 1523 aa25.25■■□□□ 1.63
KRT18-207ENST00000550600 CCDC136Q96JN2 1154 aa25.25■■□□□ 1.63
KRT18-207ENST00000550600 FANCIQ9NVI1 1328 aa25.25■■□□□ 1.63
KRT18-207ENST00000550600 GNAI1P63096 354 aa25.24■■□□□ 1.63
KRT18-207ENST00000550600 USP19O94966 1318 aa25.24■■□□□ 1.63
KRT18-207ENST00000550600 LTN1O94822 1766 aa25.24■■□□□ 1.63
KRT18-207ENST00000550600 PLIN1O60240 522 aa25.23■■□□□ 1.63
KRT18-207ENST00000550600 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
KRT18-207ENST00000550600 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
KRT18-207ENST00000550600 EXOC6Q8TAG9 804 aa25.23■■□□□ 1.63
KRT18-207ENST00000550600 EYA1Q99502 592 aa25.23■■□□□ 1.63
KRT18-207ENST00000550600 IFT57Q9NWB7 429 aa25.23■■□□□ 1.63
KRT18-207ENST00000550600 GCP02774 474 aa25.22■■□□□ 1.63
KRT18-207ENST00000550600 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
KRT18-207ENST00000550600 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
KRT18-207ENST00000550600 DLG5Q8TDM6 1919 aa25.21■■□□□ 1.63
KRT18-207ENST00000550600 PDE3AQ14432 1141 aa25.21■■□□□ 1.63
KRT18-207ENST00000550600 B4GALNT3Q6L9W6 998 aa25.21■■□□□ 1.63
KRT18-207ENST00000550600 ALS2Q96Q42 1657 aa25.19■■□□□ 1.62
KRT18-207ENST00000550600 BCAR3O75815 825 aa25.19■■□□□ 1.62
KRT18-207ENST00000550600 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
KRT18-207ENST00000550600 LMOD2Q6P5Q4 547 aa25.19■■□□□ 1.62
KRT18-207ENST00000550600 GAS2L2Q8NHY3 880 aa25.19■■□□□ 1.62
KRT18-207ENST00000550600 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
KRT18-207ENST00000550600 ZNF335Q9H4Z2 1342 aaPredicted RBP25.18■■□□□ 1.62
KRT18-207ENST00000550600 EXOSC9Q06265 439 aaKnown RBP25.17■■□□□ 1.62
KRT18-207ENST00000550600 ZNF853P0CG23 659 aa25.17■■□□□ 1.62
KRT18-207ENST00000550600 CANXP27824 592 aaKnown RBP25.17■■□□□ 1.62
KRT18-207ENST00000550600 TSR2Q969E8 191 aaKnown RBP25.17■■□□□ 1.62
KRT18-207ENST00000550600 CFAP44Q96MT7 982 aa25.17■■□□□ 1.62
KRT18-207ENST00000550600 HTATSF1O43719 755 aaKnown RBP25.16■■□□□ 1.62
KRT18-207ENST00000550600 MS4A1P11836 297 aa25.16■■□□□ 1.62
KRT18-207ENST00000550600 CRBNQ96SW2 442 aa25.16■■□□□ 1.62
KRT18-207ENST00000550600 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
KRT18-207ENST00000550600 AAMPQ13685 434 aa25.13■■□□□ 1.61
KRT18-207ENST00000550600 ALDH1L2Q3SY69 923 aa25.13■■□□□ 1.61
KRT18-207ENST00000550600 SLAIN2Q9P270 581 aa25.13■■□□□ 1.61
KRT18-207ENST00000550600 HAP1P54257 671 aaPredicted RBP25.12■■□□□ 1.61
KRT18-207ENST00000550600 RTF1Q92541 710 aaKnown RBP25.12■■□□□ 1.61
KRT18-207ENST00000550600 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
KRT18-207ENST00000550600 BRINP3Q76B58 766 aa25.1■■□□□ 1.61
KRT18-207ENST00000550600 LTV1Q96GA3 475 aaPredicted RBP25.1■■□□□ 1.61
KRT18-207ENST00000550600 LAS1LQ9Y4W2 734 aaKnown RBP25.1■■□□□ 1.61
KRT18-207ENST00000550600 PXDNQ92626 1479 aa25.1■■□□□ 1.61
KRT18-207ENST00000550600 SPATA31A3Q5VYP0 1347 aa25.09■■□□□ 1.61
KRT18-207ENST00000550600 MTHFSDQ2M296 383 aaKnown RBP25.09■■□□□ 1.61
KRT18-207ENST00000550600 BRPF1P55201 1214 aaPredicted RBP25.07■■□□□ 1.6
KRT18-207ENST00000550600 FRAT1Q92837 279 aaPredicted RBP25.07■■□□□ 1.6
KRT18-207ENST00000550600 THUMPD2Q9BTF0 503 aaKnown RBP25.07■■□□□ 1.6
KRT18-207ENST00000550600 MBIPQ9NS73 344 aa25.07■■□□□ 1.6
KRT18-207ENST00000550600 SMC4Q9NTJ3 1288 aa25.07■■□□□ 1.6
KRT18-207ENST00000550600 ABCC6O95255 1503 aa25.06■■□□□ 1.6
KRT18-207ENST00000550600 ZBTB7CA1YPR0 619 aa25.06■■□□□ 1.6
KRT18-207ENST00000550600 ZKSCAN2Q63HK3 967 aa25.06■■□□□ 1.6
KRT18-207ENST00000550600 FAM83GA6ND36 823 aa25.05■■□□□ 1.6
KRT18-207ENST00000550600 IPO8O15397 1037 aaKnown RBP25.05■■□□□ 1.6
KRT18-207ENST00000550600 KIF16BQ96L93 1317 aa25.05■■□□□ 1.6
KRT18-207ENST00000550600 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
KRT18-207ENST00000550600 CHL1O00533 1208 aa25.04■■□□□ 1.6
KRT18-207ENST00000550600 GNAT3A8MTJ3 354 aa25.04■■□□□ 1.6
KRT18-207ENST00000550600 NBPF6Q5VWK0 638 aa25.04■■□□□ 1.6
KRT18-207ENST00000550600 NBPF4Q96M43 638 aa25.04■■□□□ 1.6
KRT18-207ENST00000550600 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
KRT18-207ENST00000550600 SOS2Q07890 1332 aaPredicted RBP25.03■■□□□ 1.6
KRT18-207ENST00000550600 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
KRT18-207ENST00000550600 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
KRT18-207ENST00000550600 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
KRT18-207ENST00000550600 VAMP4O75379 141 aa25.01■■□□□ 1.59
KRT18-207ENST00000550600 AMOTQ4VCS5 1084 aa25.01■■□□□ 1.59
KRT18-207ENST00000550600 DDX17Q92841 729 aaKnown RBP25.01■■□□□ 1.59
KRT18-207ENST00000550600 BABAM1Q9NWV8 329 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms