RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 SLFNL1Q499Z3 407 aa9.83□□□□□ -0.84
TGFBR1-208ENST00000550253 VARS2Q5ST30 1063 aaKnown RBP9.83□□□□□ -0.84
TGFBR1-208ENST00000550253 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
TGFBR1-208ENST00000550253 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
TGFBR1-208ENST00000550253 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 PTK2Q05397 1052 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 PDXDC2PQ6P474 469 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 LRCH3Q96II8 777 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 ERBB3P21860 1342 aa9.82□□□□□ -0.84
TGFBR1-208ENST00000550253 FMNL1O95466 1100 aaPredicted RBP9.81□□□□□ -0.84
TGFBR1-208ENST00000550253 ATP2B4P23634 1241 aa9.81□□□□□ -0.84
TGFBR1-208ENST00000550253 SERPINB4P48594 390 aa9.81□□□□□ -0.84
TGFBR1-208ENST00000550253 PRDM2Q13029 1718 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 CTHP32929 405 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 SWI5Q1ZZU3 235 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 GPKOWQ92917 476 aaPredicted RBP eCLIP9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 KIAA1522Q9P206 1035 aaPredicted RBP9.8□□□□□ -0.84
TGFBR1-208ENST00000550253 TOP2AP11388 1531 aaKnown RBP9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 DPYDQ12882 1025 aa9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 MAP7D1Q3KQU3 841 aa9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 OGFOD1Q8N543 542 aa9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 EVA1BQ9NVM1 165 aa9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 PCDHB9Q9Y5E1 797 aa9.79□□□□□ -0.84
TGFBR1-208ENST00000550253 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
TGFBR1-208ENST00000550253 CLDN10P78369 228 aa9.78□□□□□ -0.84
TGFBR1-208ENST00000550253 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
TGFBR1-208ENST00000550253 SCNN1AP37088 669 aa9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 EML3Q32P44 896 aa9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 MRPL50Q8N5N7 158 aaKnown RBP9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 C1orf216Q8TAB5 229 aa9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 SIRT1Q96EB6 747 aa9.77□□□□□ -0.84
TGFBR1-208ENST00000550253 TK2O00142 265 aa9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 DKK1O94907 266 aa9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 APLP1P51693 650 aa9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 ZNF608Q9ULD9 1512 aaPredicted RBP9.77□□□□□ -0.85
TGFBR1-208ENST00000550253 NR1I2O75469 434 aa9.76□□□□□ -0.85
TGFBR1-208ENST00000550253 ZNF16P17020 682 aaPredicted RBP9.76□□□□□ -0.85
TGFBR1-208ENST00000550253 MARSP56192 900 aaKnown RBP9.76□□□□□ -0.85
TGFBR1-208ENST00000550253 DXOO77932 396 aaKnown RBP9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 MSS51Q4VC12 460 aa9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 TRIM50Q86XT4 487 aa9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 ADAM32Q8TC27 787 aa9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 ZNF594Q96JF6 807 aaPredicted RBP9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 DNAAF2Q9NVR5 837 aaKnown RBP9.75□□□□□ -0.85
TGFBR1-208ENST00000550253 ZBTB7BO15156 539 aaPredicted RBP9.74□□□□□ -0.85
TGFBR1-208ENST00000550253 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
TGFBR1-208ENST00000550253 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
TGFBR1-208ENST00000550253 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
TGFBR1-208ENST00000550253 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
TGFBR1-208ENST00000550253 ATP1A2P50993 1020 aa9.73□□□□□ -0.85
TGFBR1-208ENST00000550253 SIX5Q8N196 739 aa9.73□□□□□ -0.85
TGFBR1-208ENST00000550253 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
TGFBR1-208ENST00000550253 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
TGFBR1-208ENST00000550253 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
TGFBR1-208ENST00000550253 MMP16P51512 607 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 PPP4CP60510 307 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 ARHGEF11O15085 1522 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 OCLNQ16625 522 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 CCDC85AQ96PX6 553 aaPredicted RBP9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
TGFBR1-208ENST00000550253 NPAS4Q8IUM7 802 aa9.71□□□□□ -0.86
TGFBR1-208ENST00000550253 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.86
TGFBR1-208ENST00000550253 ANKRD33BA6NCL7 494 aa9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 SH3BP5LQ7L8J4 393 aa9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 CXXC1Q9P0U4 656 aaPredicted RBP9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 EGFL7Q9UHF1 273 aa9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 HPS5Q9UPZ3 1129 aa9.7□□□□□ -0.86
TGFBR1-208ENST00000550253 HRO43593 1189 aa9.69□□□□□ -0.86
TGFBR1-208ENST00000550253 PRMT3O60678 531 aa9.69□□□□□ -0.86
TGFBR1-208ENST00000550253 SEC13P55735 322 aa9.69□□□□□ -0.86
TGFBR1-208ENST00000550253 GIPC2Q8TF65 315 aa9.69□□□□□ -0.86
TGFBR1-208ENST00000550253 CHD1O14646 1710 aa9.69□□□□□ -0.86
TGFBR1-208ENST00000550253 CCDC88BA6NC98 1476 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 SPSB2Q99619 263 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 USP35Q9P2H5 1018 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 DOLKQ9UPQ8 538 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
TGFBR1-208ENST00000550253 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms