RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GCP02774 474 aa28.12■■■□□ 2.09
CTDSP2-204ENST00000548823 PTF1AQ7RTS3 328 aa28.12■■■□□ 2.09
CTDSP2-204ENST00000548823 CDK19Q9BWU1 502 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 LRRC37A3O60309 1634 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 PLEKHG3A1L390 1219 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 NLRP13Q86W25 1043 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 STK32BQ9NY57 414 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 CCDC61Q9Y6R9 512 aa28.11■■■□□ 2.09
CTDSP2-204ENST00000548823 TOPAZ1Q8N9V7 1692 aa28.1■■■□□ 2.09
CTDSP2-204ENST00000548823 ARHGEF28Q8N1W1 1705 aaKnown RBP28.09■■■□□ 2.09
CTDSP2-204ENST00000548823 SLC15A2Q16348 729 aa28.08■■■□□ 2.09
CTDSP2-204ENST00000548823 MTFR1LQ9H019 292 aa28.08■■■□□ 2.09
CTDSP2-204ENST00000548823 BCL9O00512 1426 aa28.08■■■□□ 2.09
CTDSP2-204ENST00000548823 SGIP1Q9BQI5 828 aa28.07■■■□□ 2.08
CTDSP2-204ENST00000548823 KDM2AQ9Y2K7 1162 aa28.07■■■□□ 2.08
CTDSP2-204ENST00000548823 TXNRD1Q16881 649 aa28.05■■■□□ 2.08
CTDSP2-204ENST00000548823 MARCH10Q8NA82 808 aaPredicted RBP28.04■■■□□ 2.08
CTDSP2-204ENST00000548823 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
CTDSP2-204ENST00000548823 STAC3Q96MF2 364 aa28.04■■■□□ 2.08
CTDSP2-204ENST00000548823 AATKQ6ZMQ8 1374 aa28.03■■■□□ 2.08
CTDSP2-204ENST00000548823 TOM1L2Q6ZVM7 507 aa28.02■■■□□ 2.08
CTDSP2-204ENST00000548823 CDCA7Q9BWT1 371 aaPredicted RBP28.01■■■□□ 2.07
CTDSP2-204ENST00000548823 AKAP12Q02952 1782 aa28.01■■■□□ 2.07
CTDSP2-204ENST00000548823 MAP3K5Q99683 1374 aa28■■■□□ 2.07
CTDSP2-204ENST00000548823 L3MBTL2Q969R5 705 aa28■■■□□ 2.07
CTDSP2-204ENST00000548823 ARXQ96QS3 562 aa27.99■■■□□ 2.07
CTDSP2-204ENST00000548823 WNK3Q9BYP7 1800 aa27.99■■■□□ 2.07
CTDSP2-204ENST00000548823 ZBTB7CA1YPR0 619 aa27.99■■■□□ 2.07
CTDSP2-204ENST00000548823 GIGYF1O75420 1035 aaPredicted RBP27.99■■■□□ 2.07
CTDSP2-204ENST00000548823 BRD4O60885 1362 aaPredicted RBP27.97■■■□□ 2.07
CTDSP2-204ENST00000548823 WDR17Q8IZU2 1322 aa27.95■■■□□ 2.06
CTDSP2-204ENST00000548823 GPR162Q16538 588 aa27.94■■■□□ 2.06
CTDSP2-204ENST00000548823 COL18A1P39060 1754 aa27.93■■■□□ 2.06
CTDSP2-204ENST00000548823 NLRP6P59044 892 aa27.92■■■□□ 2.06
CTDSP2-204ENST00000548823 SLIT3O75094 1523 aa27.92■■■□□ 2.06
CTDSP2-204ENST00000548823 PPIP5K1Q6PFW1 1433 aa27.91■■■□□ 2.06
CTDSP2-204ENST00000548823 AXIN2Q9Y2T1 843 aa27.9■■■□□ 2.06
CTDSP2-204ENST00000548823 CEP350Q5VT06 3117 aa27.9■■■□□ 2.06
CTDSP2-204ENST00000548823 EXOC5O00471 708 aa27.88■■■□□ 2.05
CTDSP2-204ENST00000548823 CARD10Q9BWT7 1032 aa27.87■■■□□ 2.05
CTDSP2-204ENST00000548823 SRPK2P78362 688 aaKnown RBP27.86■■■□□ 2.05
CTDSP2-204ENST00000548823 PAPPAQ13219 1627 aa27.84■■■□□ 2.05
CTDSP2-204ENST00000548823 USP6P35125 1406 aa27.84■■■□□ 2.05
CTDSP2-204ENST00000548823 NHSQ6T4R5 1651 aa27.82■■■□□ 2.04
CTDSP2-204ENST00000548823 CPSF1Q10570 1443 aaKnown RBP27.82■■■□□ 2.04
CTDSP2-204ENST00000548823 CSB-PGBD3P0DP91 1061 aa27.81■■■□□ 2.04
CTDSP2-204ENST00000548823 ARHGEF25Q86VW2 580 aa27.81■■■□□ 2.04
CTDSP2-204ENST00000548823 RGPD5Q99666 1765 aa27.81■■■□□ 2.04
CTDSP2-204ENST00000548823 CABP2Q9NPB3 220 aa27.8■■■□□ 2.04
CTDSP2-204ENST00000548823 SHANK3Q9BYB0 1731 aa27.8■■■□□ 2.04
CTDSP2-204ENST00000548823 TNS2Q63HR2 1409 aa27.79■■■□□ 2.04
CTDSP2-204ENST00000548823 CCDC7Q96M83 1385 aa27.78■■■□□ 2.04
CTDSP2-204ENST00000548823 SLC16A10Q8TF71 515 aa27.78■■■□□ 2.04
CTDSP2-204ENST00000548823 CABP1Q9NZU7 370 aa27.78■■■□□ 2.04
CTDSP2-204ENST00000548823 PIK3C2AO00443 1686 aa27.77■■■□□ 2.04
CTDSP2-204ENST00000548823 ZNF827Q17R98 1081 aa27.77■■■□□ 2.04
CTDSP2-204ENST00000548823 PELP1Q8IZL8 1130 aaKnown RBP27.77■■■□□ 2.04
CTDSP2-204ENST00000548823 KLHL34Q8N239 644 aa27.76■■■□□ 2.03
CTDSP2-204ENST00000548823 KCNH5Q8NCM2 988 aa27.76■■■□□ 2.03
CTDSP2-204ENST00000548823 ACSBG1Q96GR2 724 aa27.76■■■□□ 2.03
CTDSP2-204ENST00000548823 GOLGB1Q14789 3259 aaKnown RBP27.76■■■□□ 2.03
CTDSP2-204ENST00000548823 KIAA1210Q9ULL0 1709 aa27.76■■■□□ 2.03
CTDSP2-204ENST00000548823 POLD1P28340 1107 aa27.75■■■□□ 2.03
CTDSP2-204ENST00000548823 TRPM1Q7Z4N2 1603 aa27.75■■■□□ 2.03
CTDSP2-204ENST00000548823 EIF4G2P78344 907 aaKnown RBP eCLIP27.74■■■□□ 2.035e-13■■□□□ 11.6
CTDSP2-204ENST00000548823 COL24A1Q17RW2 1714 aa27.73■■■□□ 2.03
CTDSP2-204ENST00000548823 BTAF1O14981 1849 aa27.73■■■□□ 2.03
CTDSP2-204ENST00000548823 LRRC4BQ9NT99 713 aa27.73■■■□□ 2.03
CTDSP2-204ENST00000548823 MIER1Q8N108 512 aa27.72■■■□□ 2.03
CTDSP2-204ENST00000548823 CENPJQ9HC77 1338 aaPredicted RBP27.71■■■□□ 2.03
CTDSP2-204ENST00000548823 QRICH2Q9H0J4 1663 aa27.71■■■□□ 2.03
CTDSP2-204ENST00000548823 QSER1Q2KHR3 1735 aa27.71■■■□□ 2.03
CTDSP2-204ENST00000548823 ABCC6O95255 1503 aa27.71■■■□□ 2.03
CTDSP2-204ENST00000548823 AKT1S1Q96B36 256 aa27.71■■■□□ 2.03
CTDSP2-204ENST00000548823 GRIN3BO60391 1043 aa27.7■■■□□ 2.02
CTDSP2-204ENST00000548823 KAT6BQ8WYB5 2073 aa27.69■■■□□ 2.02
CTDSP2-204ENST00000548823 HSPA5P11021 654 aaKnown RBP27.69■■■□□ 2.02
CTDSP2-204ENST00000548823 NBPF1Q3BBV0 1214 aa27.68■■■□□ 2.02
CTDSP2-204ENST00000548823 NLGN2Q8NFZ4 835 aa27.68■■■□□ 2.02
CTDSP2-204ENST00000548823 SOX12O15370 315 aa27.67■■■□□ 2.02
CTDSP2-204ENST00000548823 PNPLA7Q6ZV29 1317 aa27.65■■■□□ 2.02
CTDSP2-204ENST00000548823 TTC21BQ7Z4L5 1316 aa27.65■■■□□ 2.02
CTDSP2-204ENST00000548823 SLC27A3Q5K4L6 730 aa27.65■■■□□ 2.02
CTDSP2-204ENST00000548823 ZNF692Q9BU19 519 aaPredicted RBP27.64■■■□□ 2.02
CTDSP2-204ENST00000548823 YBX3P16989 372 aaKnown RBP eCLIP27.63■■■□□ 2.012e-7■■■□□ 15
CTDSP2-204ENST00000548823 NFAT5O94916 1531 aa27.63■■■□□ 2.01
CTDSP2-204ENST00000548823 IL2RBP14784 551 aa27.62■■■□□ 2.01
CTDSP2-204ENST00000548823 TTC21AQ8NDW8 1320 aa27.62■■■□□ 2.01
CTDSP2-204ENST00000548823 ATP10DQ9P241 1426 aa27.61■■■□□ 2.01
CTDSP2-204ENST00000548823 HSPA6P17066 643 aa27.6■■■□□ 2.01
CTDSP2-204ENST00000548823 TFCP2L1Q9NZI6 479 aa27.6■■■□□ 2.01
CTDSP2-204ENST00000548823 NLRP2Q9NX02 1062 aa27.59■■■□□ 2.01
CTDSP2-204ENST00000548823 ERBB3P21860 1342 aa27.58■■■□□ 2.01
CTDSP2-204ENST00000548823 TUBGCP6Q96RT7 1819 aa27.58■■■□□ 2.01
CTDSP2-204ENST00000548823 GPBP1L1Q9HC44 474 aaPredicted RBP27.58■■■□□ 2.01
CTDSP2-204ENST00000548823 DDX10Q13206 875 aaKnown RBP27.57■■■□□ 2
CTDSP2-204ENST00000548823 EVC2Q86UK5 1308 aa27.55■■■□□ 2
CTDSP2-204ENST00000548823 USP47Q96K76 1375 aa27.51■■■□□ 2
CTDSP2-204ENST00000548823 KCNQ4P56696 695 aa27.49■■□□□ 1.99
CTDSP2-204ENST00000548823 WASHC2AQ641Q2 1341 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms