RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RGPD5Q99666 1765 aa28.83■■■□□ 2.21
GATC-202ENST00000548171 WDR17Q8IZU2 1322 aa28.83■■■□□ 2.21
GATC-202ENST00000548171 ZNF692Q9BU19 519 aaPredicted RBP28.82■■■□□ 2.2
GATC-202ENST00000548171 CPSF1Q10570 1443 aaKnown RBP28.82■■■□□ 2.2
GATC-202ENST00000548171 KCNQ2O43526 872 aa28.81■■■□□ 2.2
GATC-202ENST00000548171 KCNH5Q8NCM2 988 aa28.81■■■□□ 2.2
GATC-202ENST00000548171 PPP1R1BQ9UD71 204 aaPredicted RBP28.81■■■□□ 2.2
GATC-202ENST00000548171 BCL9O00512 1426 aa28.8■■■□□ 2.2
GATC-202ENST00000548171 BCL11BQ9C0K0 894 aaPredicted RBP28.8■■■□□ 2.2
GATC-202ENST00000548171 NINLQ9Y2I6 1382 aa28.79■■■□□ 2.2
GATC-202ENST00000548171 L3MBTL2Q969R5 705 aa28.79■■■□□ 2.2
GATC-202ENST00000548171 ARHGEF25Q86VW2 580 aa28.78■■■□□ 2.2
GATC-202ENST00000548171 AXIN2Q9Y2T1 843 aa28.78■■■□□ 2.2
GATC-202ENST00000548171 CASZ1Q86V15 1759 aa28.77■■■□□ 2.2
GATC-202ENST00000548171 TTC21BQ7Z4L5 1316 aa28.76■■■□□ 2.19
GATC-202ENST00000548171 TTC21AQ8NDW8 1320 aa28.76■■■□□ 2.19
GATC-202ENST00000548171 ABCC6O95255 1503 aa28.75■■■□□ 2.19
GATC-202ENST00000548171 DCAF8L1A6NGE4 600 aa28.75■■■□□ 2.19
GATC-202ENST00000548171 YY1P25490 414 aa28.73■■■□□ 2.19
GATC-202ENST00000548171 MARCH10Q8NA82 808 aaPredicted RBP28.73■■■□□ 2.19
GATC-202ENST00000548171 CARD10Q9BWT7 1032 aa28.73■■■□□ 2.19
GATC-202ENST00000548171 CSB-PGBD3P0DP91 1061 aa28.72■■■□□ 2.19
GATC-202ENST00000548171 NFAT5O94916 1531 aa28.72■■■□□ 2.19
GATC-202ENST00000548171 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
GATC-202ENST00000548171 MON2Q7Z3U7 1717 aa28.72■■■□□ 2.19
GATC-202ENST00000548171 PTF1AQ7RTS3 328 aa28.69■■■□□ 2.18
GATC-202ENST00000548171 ANO8Q9HCE9 1232 aaPredicted RBP28.69■■■□□ 2.18
GATC-202ENST00000548171 CCDC7Q96M83 1385 aa28.69■■■□□ 2.18
GATC-202ENST00000548171 KTN1Q86UP2 1357 aaKnown RBP28.68■■■□□ 2.18
GATC-202ENST00000548171 EXOC5O00471 708 aa28.67■■■□□ 2.18
GATC-202ENST00000548171 SOX12O15370 315 aa28.67■■■□□ 2.18
GATC-202ENST00000548171 PROM2Q8N271 834 aa28.67■■■□□ 2.18
GATC-202ENST00000548171 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
GATC-202ENST00000548171 TNS2Q63HR2 1409 aa28.63■■■□□ 2.17
GATC-202ENST00000548171 TXNRD1Q16881 649 aa28.63■■■□□ 2.17
GATC-202ENST00000548171 NHSQ6T4R5 1651 aa28.63■■■□□ 2.17
GATC-202ENST00000548171 SBNO2Q9Y2G9 1366 aa28.62■■■□□ 2.17
GATC-202ENST00000548171 LTN1O94822 1766 aa28.62■■■□□ 2.17
GATC-202ENST00000548171 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
GATC-202ENST00000548171 STK32BQ9NY57 414 aa28.62■■■□□ 2.17
GATC-202ENST00000548171 USP31Q70CQ4 1352 aa28.61■■■□□ 2.17
GATC-202ENST00000548171 MYOM1P52179 1685 aa28.6■■■□□ 2.17
GATC-202ENST00000548171 PDGFDQ9GZP0 370 aaPredicted RBP28.58■■■□□ 2.17
GATC-202ENST00000548171 ZBTB7AO95365 584 aa28.57■■■□□ 2.16
GATC-202ENST00000548171 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
GATC-202ENST00000548171 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
GATC-202ENST00000548171 ERBB3P21860 1342 aa28.56■■■□□ 2.16
GATC-202ENST00000548171 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
GATC-202ENST00000548171 PTGER2P43116 358 aa28.55■■■□□ 2.16
GATC-202ENST00000548171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.54■■■□□ 2.16
GATC-202ENST00000548171 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
GATC-202ENST00000548171 CD163L1Q9NR16 1453 aa28.53■■■□□ 2.16
GATC-202ENST00000548171 BTAF1O14981 1849 aa28.53■■■□□ 2.16
GATC-202ENST00000548171 ATF5Q9Y2D1 282 aaPredicted RBP28.52■■■□□ 2.16
GATC-202ENST00000548171 IL2RBP14784 551 aa28.51■■■□□ 2.15
GATC-202ENST00000548171 MTFR1LQ9H019 292 aa28.51■■■□□ 2.15
GATC-202ENST00000548171 NME9Q86XW9 330 aa28.5■■■□□ 2.15
GATC-202ENST00000548171 PAPPAQ13219 1627 aa28.5■■■□□ 2.15
GATC-202ENST00000548171 HDGFL2Q7Z4V5 671 aaPredicted RBP28.49■■■□□ 2.15
GATC-202ENST00000548171 EDC4Q6P2E9 1401 aaKnown RBP28.48■■■□□ 2.15
GATC-202ENST00000548171 FAM208AQ9UK61 1670 aaKnown RBP28.48■■■□□ 2.15
GATC-202ENST00000548171 TMC1Q8TDI8 760 aa28.47■■■□□ 2.15
GATC-202ENST00000548171 CHD4Q14839 1912 aa28.47■■■□□ 2.15
GATC-202ENST00000548171 ACSBG1Q96GR2 724 aa28.46■■■□□ 2.15
GATC-202ENST00000548171 CARD11Q9BXL7 1154 aa28.46■■■□□ 2.15
GATC-202ENST00000548171 ANKRD24Q8TF21 1146 aa28.45■■■□□ 2.14
GATC-202ENST00000548171 SGIP1Q9BQI5 828 aa28.45■■■□□ 2.14
GATC-202ENST00000548171 SYT17Q9BSW7 474 aa28.45■■■□□ 2.14
GATC-202ENST00000548171 TERF2IPQ9NYB0 399 aa28.45■■■□□ 2.14
GATC-202ENST00000548171 FHDC1Q9C0D6 1143 aaPredicted RBP28.44■■■□□ 2.14
GATC-202ENST00000548171 PUS7Q96PZ0 661 aaKnown RBP28.43■■■□□ 2.14
GATC-202ENST00000548171 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
GATC-202ENST00000548171 QSER1Q2KHR3 1735 aa28.41■■■□□ 2.14
GATC-202ENST00000548171 A0A1W2PP64 1363 aa28.4■■■□□ 2.14
GATC-202ENST00000548171 MAP3K5Q99683 1374 aa28.38■■■□□ 2.13
GATC-202ENST00000548171 ARXQ96QS3 562 aa28.38■■■□□ 2.13
GATC-202ENST00000548171 IP6K1Q92551 441 aa28.37■■■□□ 2.13
GATC-202ENST00000548171 SLC27A3Q5K4L6 730 aa28.34■■■□□ 2.13
GATC-202ENST00000548171 COL24A1Q17RW2 1714 aa28.33■■■□□ 2.13
GATC-202ENST00000548171 ZNF827Q17R98 1081 aa28.33■■■□□ 2.13
GATC-202ENST00000548171 ZNF784Q8NCA9 323 aaPredicted RBP28.33■■■□□ 2.13
GATC-202ENST00000548171 LRRC4BQ9NT99 713 aa28.33■■■□□ 2.13
GATC-202ENST00000548171 DDX54Q8TDD1 881 aaKnown RBP28.31■■■□□ 2.12
GATC-202ENST00000548171 SLC16A10Q8TF71 515 aa28.31■■■□□ 2.12
GATC-202ENST00000548171 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
GATC-202ENST00000548171 DOT1LQ8TEK3 1739 aa28.3■■■□□ 2.12
GATC-202ENST00000548171 AKT1S1Q96B36 256 aa28.3■■■□□ 2.12
GATC-202ENST00000548171 LY75O60449 1722 aa28.29■■■□□ 2.12
GATC-202ENST00000548171 SLC24A1O60721 1099 aa28.28■■■□□ 2.12
GATC-202ENST00000548171 LTV1Q96GA3 475 aaPredicted RBP28.28■■■□□ 2.12
GATC-202ENST00000548171 RGPD2P0DJD1 1756 aa28.28■■■□□ 2.12
GATC-202ENST00000548171 SHANK3Q9BYB0 1731 aa28.28■■■□□ 2.12
GATC-202ENST00000548171 TUBGCP6Q96RT7 1819 aa28.27■■■□□ 2.12
GATC-202ENST00000548171 COG3Q96JB2 828 aa28.27■■■□□ 2.12
GATC-202ENST00000548171 ANKRD36BQ8N2N9 1353 aa28.26■■■□□ 2.12
GATC-202ENST00000548171 POLD1P28340 1107 aa28.25■■■□□ 2.11
GATC-202ENST00000548171 MAP3K19Q56UN5 1328 aa28.24■■■□□ 2.11
GATC-202ENST00000548171 HOXC9P31274 260 aa28.24■■■□□ 2.11
GATC-202ENST00000548171 AMPHP49418 695 aa28.23■■■□□ 2.11
GATC-202ENST00000548171 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms