RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 PTF1AQ7RTS3 328 aa17.69■□□□□ 0.42
BRF1-207ENST00000546417 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
BRF1-207ENST00000546417 BCL9O00512 1426 aa17.68■□□□□ 0.42
BRF1-207ENST00000546417 TXNRD1Q16881 649 aa17.68■□□□□ 0.42
BRF1-207ENST00000546417 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
BRF1-207ENST00000546417 AKAP12Q02952 1782 aa17.67■□□□□ 0.42
BRF1-207ENST00000546417 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
BRF1-207ENST00000546417 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
BRF1-207ENST00000546417 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
BRF1-207ENST00000546417 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
BRF1-207ENST00000546417 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
BRF1-207ENST00000546417 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
BRF1-207ENST00000546417 ARXQ96QS3 562 aa17.65■□□□□ 0.42
BRF1-207ENST00000546417 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
BRF1-207ENST00000546417 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
BRF1-207ENST00000546417 BRD4O60885 1362 aaPredicted RBP17.63■□□□□ 0.41
BRF1-207ENST00000546417 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
BRF1-207ENST00000546417 GPR162Q16538 588 aa17.62■□□□□ 0.41
BRF1-207ENST00000546417 WDR17Q8IZU2 1322 aa17.61■□□□□ 0.41
BRF1-207ENST00000546417 NLRP6P59044 892 aa17.6■□□□□ 0.41
BRF1-207ENST00000546417 PPIP5K1Q6PFW1 1433 aa17.58■□□□□ 0.41
BRF1-207ENST00000546417 EXOC5O00471 708 aa17.58■□□□□ 0.4
BRF1-207ENST00000546417 COL18A1P39060 1754 aa17.58■□□□□ 0.4
BRF1-207ENST00000546417 SLIT3O75094 1523 aa17.57■□□□□ 0.4
BRF1-207ENST00000546417 SRPK2P78362 688 aaKnown RBP17.57■□□□□ 0.4
BRF1-207ENST00000546417 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
BRF1-207ENST00000546417 CEP350Q5VT06 3117 aa17.57■□□□□ 0.4
BRF1-207ENST00000546417 CARD10Q9BWT7 1032 aa17.56■□□□□ 0.4
BRF1-207ENST00000546417 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
BRF1-207ENST00000546417 USP6P35125 1406 aa17.54■□□□□ 0.4
BRF1-207ENST00000546417 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
BRF1-207ENST00000546417 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
BRF1-207ENST00000546417 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
BRF1-207ENST00000546417 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
BRF1-207ENST00000546417 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
BRF1-207ENST00000546417 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
BRF1-207ENST00000546417 SLC16A10Q8TF71 515 aa17.52■□□□□ 0.4
BRF1-207ENST00000546417 POLD1P28340 1107 aa17.51■□□□□ 0.39
BRF1-207ENST00000546417 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
BRF1-207ENST00000546417 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
BRF1-207ENST00000546417 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
BRF1-207ENST00000546417 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
BRF1-207ENST00000546417 SHANK3Q9BYB0 1731 aa17.5■□□□□ 0.39
BRF1-207ENST00000546417 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
BRF1-207ENST00000546417 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
BRF1-207ENST00000546417 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
BRF1-207ENST00000546417 PIK3C2AO00443 1686 aa17.49■□□□□ 0.39
BRF1-207ENST00000546417 ACSBG1Q96GR2 724 aa17.49■□□□□ 0.39
BRF1-207ENST00000546417 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
BRF1-207ENST00000546417 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
BRF1-207ENST00000546417 ZNF827Q17R98 1081 aa17.48■□□□□ 0.39
BRF1-207ENST00000546417 BTAF1O14981 1849 aa17.47■□□□□ 0.39
BRF1-207ENST00000546417 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
BRF1-207ENST00000546417 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
BRF1-207ENST00000546417 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
BRF1-207ENST00000546417 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
BRF1-207ENST00000546417 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
BRF1-207ENST00000546417 COL24A1Q17RW2 1714 aa17.46■□□□□ 0.39
BRF1-207ENST00000546417 ABCC6O95255 1503 aa17.46■□□□□ 0.39
BRF1-207ENST00000546417 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
BRF1-207ENST00000546417 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
BRF1-207ENST00000546417 SOX12O15370 315 aa17.44■□□□□ 0.38
BRF1-207ENST00000546417 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
BRF1-207ENST00000546417 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
BRF1-207ENST00000546417 NBPF1Q3BBV0 1214 aa17.43■□□□□ 0.38
BRF1-207ENST00000546417 SLC27A3Q5K4L6 730 aa17.43■□□□□ 0.38
BRF1-207ENST00000546417 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
BRF1-207ENST00000546417 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
BRF1-207ENST00000546417 IL2RBP14784 551 aa17.41■□□□□ 0.38
BRF1-207ENST00000546417 PNPLA7Q6ZV29 1317 aa17.41■□□□□ 0.38
BRF1-207ENST00000546417 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
BRF1-207ENST00000546417 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
BRF1-207ENST00000546417 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
BRF1-207ENST00000546417 TFCP2L1Q9NZI6 479 aa17.4■□□□□ 0.38
BRF1-207ENST00000546417 NFAT5O94916 1531 aa17.4■□□□□ 0.38
BRF1-207ENST00000546417 HSPA6P17066 643 aa17.39■□□□□ 0.37
BRF1-207ENST00000546417 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
BRF1-207ENST00000546417 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
BRF1-207ENST00000546417 ERBB3P21860 1342 aa17.38■□□□□ 0.37
BRF1-207ENST00000546417 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
BRF1-207ENST00000546417 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
BRF1-207ENST00000546417 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
BRF1-207ENST00000546417 MSH5O43196 834 aa17.32■□□□□ 0.36
BRF1-207ENST00000546417 LTN1O94822 1766 aa17.31■□□□□ 0.36
BRF1-207ENST00000546417 KCNQ4P56696 695 aa17.31■□□□□ 0.36
BRF1-207ENST00000546417 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
BRF1-207ENST00000546417 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
BRF1-207ENST00000546417 LY75O60449 1722 aa17.3■□□□□ 0.36
BRF1-207ENST00000546417 ZNF526Q8TF50 670 aaPredicted RBP17.3■□□□□ 0.36
BRF1-207ENST00000546417 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
BRF1-207ENST00000546417 ADCY9O60503 1353 aa17.29■□□□□ 0.36
BRF1-207ENST00000546417 CD2APQ9Y5K6 639 aa17.29■□□□□ 0.36
BRF1-207ENST00000546417 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
BRF1-207ENST00000546417 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
BRF1-207ENST00000546417 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
BRF1-207ENST00000546417 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
BRF1-207ENST00000546417 USP54Q70EL1 1684 aa17.27■□□□□ 0.36
BRF1-207ENST00000546417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRF1-207ENST00000546417 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
BRF1-207ENST00000546417 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms