RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 HOXC9P31274 260 aa25.57■■□□□ 1.68
SKP2-208ENST00000546211 GOLGA2Q08379 1002 aa25.57■■□□□ 1.68
SKP2-208ENST00000546211 PRKAR2BP31323 418 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 NEUROD2Q15784 382 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 CDCA7LQ96GN5 454 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
SKP2-208ENST00000546211 ARHGEF10O15013 1369 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 SPATA31A3Q5VYP0 1347 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 LTN1O94822 1766 aa25.56■■□□□ 1.68
SKP2-208ENST00000546211 CCDC27Q2M243 656 aa25.55■■□□□ 1.68
SKP2-208ENST00000546211 WWC1Q8IX03 1113 aa25.54■■□□□ 1.68
SKP2-208ENST00000546211 PLEKHG5O94827 1062 aa25.53■■□□□ 1.68
SKP2-208ENST00000546211 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
SKP2-208ENST00000546211 IP6K1Q92551 441 aa25.53■■□□□ 1.68
SKP2-208ENST00000546211 SOS2Q07890 1332 aaPredicted RBP25.53■■□□□ 1.68
SKP2-208ENST00000546211 TMPOP42166 694 aaKnown RBP25.52■■□□□ 1.68
SKP2-208ENST00000546211 PHRF1Q9P1Y6 1649 aaKnown RBP25.52■■□□□ 1.68
SKP2-208ENST00000546211 RGPD1P0DJD0 1748 aa25.52■■□□□ 1.68
SKP2-208ENST00000546211 ZBTB7CA1YPR0 619 aa25.52■■□□□ 1.68
SKP2-208ENST00000546211 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
SKP2-208ENST00000546211 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
SKP2-208ENST00000546211 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
SKP2-208ENST00000546211 ARHGEF25Q86VW2 580 aa25.51■■□□□ 1.67
SKP2-208ENST00000546211 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
SKP2-208ENST00000546211 NEFLP07196 543 aa25.49■■□□□ 1.67
SKP2-208ENST00000546211 NHSL1Q5SYE7 1610 aa25.49■■□□□ 1.67
SKP2-208ENST00000546211 E9PSI1 815 aa25.48■■□□□ 1.67
SKP2-208ENST00000546211 SLFN5Q08AF3 891 aa25.48■■□□□ 1.67
SKP2-208ENST00000546211 WDR63Q8IWG1 891 aa25.48■■□□□ 1.67
SKP2-208ENST00000546211 RIPK4P57078 832 aa25.47■■□□□ 1.67
SKP2-208ENST00000546211 IGSF1Q8N6C5 1336 aa25.46■■□□□ 1.67
SKP2-208ENST00000546211 NFE2L2Q16236 605 aa25.46■■□□□ 1.67
SKP2-208ENST00000546211 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
SKP2-208ENST00000546211 PHACTR3Q96KR7 559 aa25.46■■□□□ 1.67
SKP2-208ENST00000546211 EYA1Q99502 592 aa25.46■■□□□ 1.67
SKP2-208ENST00000546211 DUSP27Q5VZP5 1158 aa25.45■■□□□ 1.66
SKP2-208ENST00000546211 LTV1Q96GA3 475 aaPredicted RBP25.45■■□□□ 1.66
SKP2-208ENST00000546211 TRMT2AQ8IZ69 625 aaKnown RBP25.44■■□□□ 1.66
SKP2-208ENST00000546211 ZC3H6P61129 1189 aaKnown RBP25.43■■□□□ 1.66
SKP2-208ENST00000546211 KDRP35968 1356 aa25.42■■□□□ 1.66
SKP2-208ENST00000546211 TRIM35Q9UPQ4 493 aa25.42■■□□□ 1.66
SKP2-208ENST00000546211 ROBO1Q9Y6N7 1651 aa25.42■■□□□ 1.66
SKP2-208ENST00000546211 CRYBG1Q9Y4K1 1723 aa25.42■■□□□ 1.66
SKP2-208ENST00000546211 CABLES1Q8TDN4 633 aa25.41■■□□□ 1.66
SKP2-208ENST00000546211 SPINK5Q9NQ38 1064 aaPredicted RBP25.41■■□□□ 1.66
SKP2-208ENST00000546211 RCAN3Q9UKA8 241 aa25.39■■□□□ 1.66
SKP2-208ENST00000546211 LMOD3Q0VAK6 560 aa25.39■■□□□ 1.65
SKP2-208ENST00000546211 FKBP8Q14318 412 aa25.37■■□□□ 1.65
SKP2-208ENST00000546211 MYH16Q9H6N6 1097 aa25.37■■□□□ 1.65
SKP2-208ENST00000546211 CPDO75976 1380 aa25.36■■□□□ 1.65
SKP2-208ENST00000546211 IL16Q14005 1332 aa25.36■■□□□ 1.65
SKP2-208ENST00000546211 ANKRD24Q8TF21 1146 aa25.36■■□□□ 1.65
SKP2-208ENST00000546211 AHDC1Q5TGY3 1603 aaPredicted RBP25.36■■□□□ 1.65
SKP2-208ENST00000546211 ABCC6O95255 1503 aa25.36■■□□□ 1.65
SKP2-208ENST00000546211 TOM1O60784 492 aa25.35■■□□□ 1.65
SKP2-208ENST00000546211 HAP1P54257 671 aaPredicted RBP25.35■■□□□ 1.65
SKP2-208ENST00000546211 AXIN2Q9Y2T1 843 aa25.35■■□□□ 1.65
SKP2-208ENST00000546211 CALD1Q05682 793 aaKnown RBP25.34■■□□□ 1.65
SKP2-208ENST00000546211 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
SKP2-208ENST00000546211 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
SKP2-208ENST00000546211 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
SKP2-208ENST00000546211 KIAA0232Q92628 1395 aa25.33■■□□□ 1.64
SKP2-208ENST00000546211 RNF123Q5XPI4 1314 aa25.32■■□□□ 1.64
SKP2-208ENST00000546211 USHBP1Q8N6Y0 703 aa25.31■■□□□ 1.64
SKP2-208ENST00000546211 ERBB3P21860 1342 aa25.31■■□□□ 1.64
SKP2-208ENST00000546211 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
SKP2-208ENST00000546211 COL18A1P39060 1754 aa25.3■■□□□ 1.64
SKP2-208ENST00000546211 ABCA3Q99758 1704 aa25.3■■□□□ 1.64
SKP2-208ENST00000546211 DLG5Q8TDM6 1919 aa25.29■■□□□ 1.64
SKP2-208ENST00000546211 RGPD5Q99666 1765 aa25.28■■□□□ 1.64
SKP2-208ENST00000546211 CHRNA2Q15822 529 aa25.28■■□□□ 1.64
SKP2-208ENST00000546211 MTHFSDQ2M296 383 aaKnown RBP25.28■■□□□ 1.64
SKP2-208ENST00000546211 PRDM11Q9NQV5 511 aa25.28■■□□□ 1.64
SKP2-208ENST00000546211 NCAPD2Q15021 1401 aa25.27■■□□□ 1.64
SKP2-208ENST00000546211 CAMTA1Q9Y6Y1 1673 aa25.27■■□□□ 1.64
SKP2-208ENST00000546211 RGPD2P0DJD1 1756 aa25.26■■□□□ 1.63
SKP2-208ENST00000546211 RRP1P56182 461 aaKnown RBP25.26■■□□□ 1.63
SKP2-208ENST00000546211 IRX6P78412 446 aaPredicted RBP25.26■■□□□ 1.63
SKP2-208ENST00000546211 FANCIQ9NVI1 1328 aa25.25■■□□□ 1.63
SKP2-208ENST00000546211 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
SKP2-208ENST00000546211 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
SKP2-208ENST00000546211 THUMPD2Q9BTF0 503 aaKnown RBP25.24■■□□□ 1.63
SKP2-208ENST00000546211 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
SKP2-208ENST00000546211 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
SKP2-208ENST00000546211 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
SKP2-208ENST00000546211 GNAI1P63096 354 aa25.23■■□□□ 1.63
SKP2-208ENST00000546211 RTF1Q92541 710 aaKnown RBP25.23■■□□□ 1.63
SKP2-208ENST00000546211 TSR2Q969E8 191 aaKnown RBP25.23■■□□□ 1.63
SKP2-208ENST00000546211 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
SKP2-208ENST00000546211 IFT57Q9NWB7 429 aa25.22■■□□□ 1.63
SKP2-208ENST00000546211 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
SKP2-208ENST00000546211 LMO7Q8WWI1 1683 aa25.22■■□□□ 1.63
SKP2-208ENST00000546211 DCTN1Q14203 1278 aa25.22■■□□□ 1.63
SKP2-208ENST00000546211 LAS1LQ9Y4W2 734 aaKnown RBP25.22■■□□□ 1.63
SKP2-208ENST00000546211 COL22A1Q8NFW1 1626 aaPredicted RBP25.21■■□□□ 1.63
SKP2-208ENST00000546211 HTATSF1O43719 755 aaKnown RBP25.21■■□□□ 1.63
SKP2-208ENST00000546211 ERICH6BQ5W0A0 696 aa25.21■■□□□ 1.63
SKP2-208ENST00000546211 COL16A1Q07092 1604 aaPredicted RBP25.2■■□□□ 1.62
SKP2-208ENST00000546211 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
SKP2-208ENST00000546211 CT47B1P0C2W7 299 aaPredicted RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms