RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 IP6K1Q92551 441 aa13.37□□□□□ -0.27
CIT-218ENST00000546026 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
CIT-218ENST00000546026 GCP02774 474 aa13.36□□□□□ -0.27
CIT-218ENST00000546026 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
CIT-218ENST00000546026 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
CIT-218ENST00000546026 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
CIT-218ENST00000546026 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
CIT-218ENST00000546026 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
CIT-218ENST00000546026 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
CIT-218ENST00000546026 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
CIT-218ENST00000546026 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
CIT-218ENST00000546026 E9PSI1 815 aa13.35□□□□□ -0.27
CIT-218ENST00000546026 PRKAR2BP31323 418 aa13.35□□□□□ -0.27
CIT-218ENST00000546026 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
CIT-218ENST00000546026 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
CIT-218ENST00000546026 RGPD1P0DJD0 1748 aa13.35□□□□□ -0.27
CIT-218ENST00000546026 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
CIT-218ENST00000546026 NEFLP07196 543 aa13.34□□□□□ -0.27
CIT-218ENST00000546026 HMOX1P09601 288 aa13.34□□□□□ -0.27
CIT-218ENST00000546026 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
CIT-218ENST00000546026 DDX17Q92841 729 aaKnown RBP13.34□□□□□ -0.27
CIT-218ENST00000546026 LTN1O94822 1766 aa13.33□□□□□ -0.28
CIT-218ENST00000546026 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
CIT-218ENST00000546026 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
CIT-218ENST00000546026 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
CIT-218ENST00000546026 RIPK4P57078 832 aa13.32□□□□□ -0.28
CIT-218ENST00000546026 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
CIT-218ENST00000546026 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
CIT-218ENST00000546026 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
CIT-218ENST00000546026 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
CIT-218ENST00000546026 EYA1Q99502 592 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 IL16Q14005 1332 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 RNF123Q5XPI4 1314 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 NHSL1Q5SYE7 1610 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 KDRP35968 1356 aa13.31□□□□□ -0.28
CIT-218ENST00000546026 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
CIT-218ENST00000546026 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
CIT-218ENST00000546026 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
CIT-218ENST00000546026 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
CIT-218ENST00000546026 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
CIT-218ENST00000546026 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
CIT-218ENST00000546026 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
CIT-218ENST00000546026 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
CIT-218ENST00000546026 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
CIT-218ENST00000546026 ABCC6O95255 1503 aa13.28□□□□□ -0.28
CIT-218ENST00000546026 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
CIT-218ENST00000546026 FKBP8Q14318 412 aa13.27□□□□□ -0.29
CIT-218ENST00000546026 CPDO75976 1380 aa13.27□□□□□ -0.29
CIT-218ENST00000546026 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
CIT-218ENST00000546026 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
CIT-218ENST00000546026 LTV1Q96GA3 475 aaPredicted RBP13.26□□□□□ -0.29
CIT-218ENST00000546026 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
CIT-218ENST00000546026 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
CIT-218ENST00000546026 LRRC59Q96AG4 307 aaKnown RBP13.25□□□□□ -0.29
CIT-218ENST00000546026 TOM1O60784 492 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 COL18A1P39060 1754 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
CIT-218ENST00000546026 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
CIT-218ENST00000546026 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
CIT-218ENST00000546026 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
CIT-218ENST00000546026 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
CIT-218ENST00000546026 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
CIT-218ENST00000546026 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
CIT-218ENST00000546026 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
CIT-218ENST00000546026 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
CIT-218ENST00000546026 GNAI1P63096 354 aa13.21□□□□□ -0.29
CIT-218ENST00000546026 MTHFSDQ2M296 383 aaKnown RBP13.21□□□□□ -0.29
CIT-218ENST00000546026 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
CIT-218ENST00000546026 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
CIT-218ENST00000546026 ERBB3P21860 1342 aa13.2□□□□□ -0.3
CIT-218ENST00000546026 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CIT-218ENST00000546026 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
CIT-218ENST00000546026 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 FAM208AQ9UK61 1670 aaKnown RBP13.19□□□□□ -0.3
CIT-218ENST00000546026 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
CIT-218ENST00000546026 AMOTQ4VCS5 1084 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
CIT-218ENST00000546026 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
CIT-218ENST00000546026 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
CIT-218ENST00000546026 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
CIT-218ENST00000546026 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
CIT-218ENST00000546026 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
CIT-218ENST00000546026 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
CIT-218ENST00000546026 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
CIT-218ENST00000546026 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
CIT-218ENST00000546026 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
CIT-218ENST00000546026 GNAT3A8MTJ3 354 aa13.17□□□□□ -0.3
CIT-218ENST00000546026 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
CIT-218ENST00000546026 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
CIT-218ENST00000546026 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
CIT-218ENST00000546026 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
CIT-218ENST00000546026 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms