RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 CPS1P31327 1500 aa12.29□□□□□ -0.44
DDX11-229ENST00000545668 SOX12O15370 315 aa12.28□□□□□ -0.44
DDX11-229ENST00000545668 TBX22Q9Y458 520 aa12.28□□□□□ -0.44
DDX11-229ENST00000545668 CT47B1P0C2W7 299 aaPredicted RBP12.28□□□□□ -0.44
DDX11-229ENST00000545668 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
DDX11-229ENST00000545668 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
DDX11-229ENST00000545668 ADGRB2O60241 1585 aa12.28□□□□□ -0.44
DDX11-229ENST00000545668 IL13P35225 146 aa12.27□□□□□ -0.44
DDX11-229ENST00000545668 ZKSCAN2Q63HK3 967 aa12.27□□□□□ -0.44
DDX11-229ENST00000545668 PMFBP1Q8TBY8 1022 aa12.27□□□□□ -0.44
DDX11-229ENST00000545668 IL16Q14005 1332 aa12.27□□□□□ -0.44
DDX11-229ENST00000545668 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.44
DDX11-229ENST00000545668 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.45
DDX11-229ENST00000545668 C8orf34Q49A92 452 aa12.27□□□□□ -0.45
DDX11-229ENST00000545668 RLBP1P12271 317 aa12.27□□□□□ -0.45
DDX11-229ENST00000545668 KNDC1Q76NI1 1749 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 NGDNQ8NEJ9 315 aaKnown RBP12.26□□□□□ -0.45
DDX11-229ENST00000545668 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 PTPRUQ92729 1446 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 PLEKHG3A1L390 1219 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 ITPRIPQ8IWB1 547 aa12.26□□□□□ -0.45
DDX11-229ENST00000545668 SEC24BO95487 1268 aa12.25□□□□□ -0.45
DDX11-229ENST00000545668 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
DDX11-229ENST00000545668 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
DDX11-229ENST00000545668 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
DDX11-229ENST00000545668 MAP2P11137 1827 aaKnown RBP12.24□□□□□ -0.45
DDX11-229ENST00000545668 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
DDX11-229ENST00000545668 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
DDX11-229ENST00000545668 C3P01024 1663 aa12.24□□□□□ -0.45
DDX11-229ENST00000545668 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
DDX11-229ENST00000545668 AAMPQ13685 434 aa12.24□□□□□ -0.45
DDX11-229ENST00000545668 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
DDX11-229ENST00000545668 CDK12Q9NYV4 1490 aaPredicted RBP12.23□□□□□ -0.45
DDX11-229ENST00000545668 FER1L4A9Z1Z3 1794 aa12.23□□□□□ -0.45
DDX11-229ENST00000545668 SLIT1O75093 1534 aa12.23□□□□□ -0.45
DDX11-229ENST00000545668 MVPQ14764 893 aaKnown RBP12.23□□□□□ -0.45
DDX11-229ENST00000545668 ARHGAP23Q9P227 1491 aa12.22□□□□□ -0.45
DDX11-229ENST00000545668 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
DDX11-229ENST00000545668 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
DDX11-229ENST00000545668 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.22□□□□□ -0.45
DDX11-229ENST00000545668 KCNA6P17658 529 aa12.22□□□□□ -0.45
DDX11-229ENST00000545668 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
DDX11-229ENST00000545668 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
DDX11-229ENST00000545668 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
DDX11-229ENST00000545668 USP6P35125 1406 aa12.21□□□□□ -0.45
DDX11-229ENST00000545668 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
DDX11-229ENST00000545668 TRIM27P14373 513 aa12.21□□□□□ -0.45
DDX11-229ENST00000545668 GNAI1P63096 354 aa12.21□□□□□ -0.45
DDX11-229ENST00000545668 ELL2O00472 640 aaPredicted RBP12.21□□□□□ -0.45
DDX11-229ENST00000545668 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.45
DDX11-229ENST00000545668 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
DDX11-229ENST00000545668 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.46
DDX11-229ENST00000545668 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 KIF16BQ96L93 1317 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
DDX11-229ENST00000545668 PTCH1Q13635 1447 aa12.19□□□□□ -0.46
DDX11-229ENST00000545668 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
DDX11-229ENST00000545668 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
DDX11-229ENST00000545668 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
DDX11-229ENST00000545668 DDX19BQ9UMR2 479 aa12.19□□□□□ -0.46
DDX11-229ENST00000545668 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
DDX11-229ENST00000545668 TTC21AQ8NDW8 1320 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 ALDH1L2Q3SY69 923 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 NLRP6P59044 892 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 AMPHP49418 695 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 MBIPQ9NS73 344 aa12.18□□□□□ -0.46
DDX11-229ENST00000545668 NUTM2GQ5VZR2 741 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 APBB1O00213 710 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 HSCBQ8IWL3 235 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
DDX11-229ENST00000545668 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
DDX11-229ENST00000545668 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
DDX11-229ENST00000545668 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
DDX11-229ENST00000545668 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
DDX11-229ENST00000545668 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
DDX11-229ENST00000545668 VAMP4O75379 141 aa12.16□□□□□ -0.46
DDX11-229ENST00000545668 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
DDX11-229ENST00000545668 TWISTNBQ3B726 338 aaPredicted RBP12.16□□□□□ -0.46
DDX11-229ENST00000545668 LNPKQ9C0E8 428 aa12.16□□□□□ -0.46
DDX11-229ENST00000545668 GOLGA6L3A6NEY3 463 aa12.15□□□□□ -0.46
DDX11-229ENST00000545668 ABTB2Q8N961 1025 aa12.15□□□□□ -0.47
DDX11-229ENST00000545668 DIP2AQ14689 1571 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 CEP170BQ9Y4F5 1589 aaPredicted RBP12.14□□□□□ -0.47
DDX11-229ENST00000545668 USP31Q70CQ4 1352 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 PIK3R4Q99570 1358 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 MCM10Q7L590 875 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
DDX11-229ENST00000545668 L1TD1Q5T7N2 865 aaKnown RBP12.13□□□□□ -0.47
DDX11-229ENST00000545668 C8orf58Q8NAV2 365 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms