RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 KLHL23Q8NBE8 558 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 TBC1D22AQ8WUA7 517 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 CHCHD3Q9NX63 227 aaKnown RBP6.25□□□□□ -1.41
UBE4A-203ENST00000545354 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
UBE4A-203ENST00000545354 STK24Q9Y6E0 443 aa6.25□□□□□ -1.41
UBE4A-203ENST00000545354 PHLDB1Q86UU1 1377 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 SMAPO00193 183 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 CREB3O43889 395 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 HMMRO75330 724 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 SF3B2Q13435 895 aaKnown RBP6.24□□□□□ -1.41
UBE4A-203ENST00000545354 HS1BP3Q53T59 392 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 CCDC82Q8N4S0 544 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 DEF6Q9H4E7 631 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 MRC2Q9UBG0 1479 aa6.24□□□□□ -1.41
UBE4A-203ENST00000545354 BAZ1BQ9UIG0 1483 aaKnown RBP6.23□□□□□ -1.41
UBE4A-203ENST00000545354 PPFIA4O75335 1185 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 KIF4AO95239 1232 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 VDRP11473 427 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 PAX7P23759 505 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 MAGEA8P43361 318 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 KCNA1Q09470 495 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 DPY19L2Q6NUT2 758 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 L3MBTL3Q96JM7 780 aaPredicted RBP6.23□□□□□ -1.41
UBE4A-203ENST00000545354 UPF2Q9HAU5 1272 aaKnown RBP6.23□□□□□ -1.41
UBE4A-203ENST00000545354 STK26Q9P289 416 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 WDR62O43379 1518 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 RIPK4P57078 832 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 FILIP1LQ4L180 1135 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 C1QTNF12Q5T7M4 302 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 JAKMIP3Q5VZ66 844 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 CLEC4GQ6UXB4 293 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 PDCL2Q8N4E4 241 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 ACRBPQ8NEB7 543 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 BORCS6Q96GS4 357 aa6.23□□□□□ -1.41
UBE4A-203ENST00000545354 DDX49Q9Y6V7 483 aaKnown RBP6.23□□□□□ -1.41
UBE4A-203ENST00000545354 BICDL2A1A5D9 508 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 ANKRD18BA2A2Z9 1011 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 TMCO5BA8MYB1 307 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 STK10O94804 968 aaKnown RBP6.22□□□□□ -1.41
UBE4A-203ENST00000545354 HSP90AB1P08238 724 aaKnown RBP6.22□□□□□ -1.41
UBE4A-203ENST00000545354 MS4A1P11836 297 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 AMOTL1Q8IY63 956 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 SYAP1Q96A49 352 aaPredicted RBP6.22□□□□□ -1.41
UBE4A-203ENST00000545354 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 UTP6Q9NYH9 597 aaKnown RBP6.22□□□□□ -1.41
UBE4A-203ENST00000545354 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 KIF5CO60282 957 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 MCM5P33992 734 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 FLT3P36888 993 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 ANKRD13BQ86YJ7 626 aa6.22□□□□□ -1.41
UBE4A-203ENST00000545354 TPX2Q9ULW0 747 aaKnown RBP6.22□□□□□ -1.41
UBE4A-203ENST00000545354 SMARCA4P51532 1647 aa6.21□□□□□ -1.41
UBE4A-203ENST00000545354 ARHGEF11O15085 1522 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 MSNP26038 577 aaKnown RBP6.21□□□□□ -1.42
UBE4A-203ENST00000545354 IRX1P78414 480 aaPredicted RBP6.21□□□□□ -1.42
UBE4A-203ENST00000545354 TMED1Q13445 227 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 MCM6Q14566 821 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
UBE4A-203ENST00000545354 CYB5RLQ6IPT4 315 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 CCDC73Q6ZRK6 1079 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
UBE4A-203ENST00000545354 TMC1Q8TDI8 760 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 RMDN2Q96LZ7 410 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 POLR3CQ9BUI4 534 aaPredicted RBP6.21□□□□□ -1.42
UBE4A-203ENST00000545354 IRF2BPLQ9H1B7 796 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 PHF8Q9UPP1 1060 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 IL16Q14005 1332 aa6.21□□□□□ -1.42
UBE4A-203ENST00000545354 IPO5O00410 1097 aaKnown RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 HTATSF1O43719 755 aaKnown RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 POU5F1Q01860 360 aaKnown RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 BIRC2Q13490 618 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 MS4A4AQ96JQ5 239 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 SUN2Q9UH99 717 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 PNMA2Q9UL42 364 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 SUFUQ9UMX1 484 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 UNCXA6NJT0 531 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 CT47B1P0C2W7 299 aaPredicted RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 ATP6V1AP38606 617 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 APLP1P51693 650 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 HDLBPQ00341 1268 aaKnown RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 BECN1Q14457 450 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 FAM184AQ8NB25 1140 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 KCNV2Q8TDN2 545 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 PNISRQ8TF01 805 aaKnown RBP6.2□□□□□ -1.42
UBE4A-203ENST00000545354 MAF1Q9H063 256 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 RASSF4Q9H2L5 321 aa6.2□□□□□ -1.42
UBE4A-203ENST00000545354 PEX14O75381 377 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 NOP2P46087 812 aaKnown RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 TRAF1Q13077 416 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 SASS6Q6UVJ0 657 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-203ENST00000545354 OTUD6AQ7L8S5 288 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 ZSCAN30Q86W11 494 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 FMNL3Q8IVF7 1028 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 HS6ST3Q8IZP7 471 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 FBXO22Q8NEZ5 403 aa6.19□□□□□ -1.42
UBE4A-203ENST00000545354 DRC1Q96MC2 740 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms