RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 GDF9O60383 454 aa10.98□□□□□ -0.65
COPA-206ENST00000545266 GRM5P41594 1212 aa10.98□□□□□ -0.65
COPA-206ENST00000545266 CFAP70Q5T0N1 1121 aa10.97□□□□□ -0.65
COPA-206ENST00000545266 PALM3A6NDB9 673 aaPredicted RBP10.96□□□□□ -0.65
COPA-206ENST00000545266 PIK3CDO00329 1044 aa10.96□□□□□ -0.65
COPA-206ENST00000545266 ATP9BO43861 1147 aa10.96□□□□□ -0.65
COPA-206ENST00000545266 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
COPA-206ENST00000545266 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
COPA-206ENST00000545266 KCTD15Q96SI1 283 aaPredicted RBP10.96□□□□□ -0.65
COPA-206ENST00000545266 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
COPA-206ENST00000545266 PRR20EP86478 221 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 PRR20CP86479 221 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 PRR20DP86480 221 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 PRR20BP86481 221 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 PRR20AP86496 221 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 SLFNL1Q499Z3 407 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
COPA-206ENST00000545266 TFIP11Q9UBB9 837 aaKnown RBP10.95□□□□□ -0.66
COPA-206ENST00000545266 MAP7D1Q3KQU3 841 aa10.94□□□□□ -0.66
COPA-206ENST00000545266 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
COPA-206ENST00000545266 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
COPA-206ENST00000545266 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
COPA-206ENST00000545266 LZTS3O60299 673 aaPredicted RBP10.93□□□□□ -0.66
COPA-206ENST00000545266 ADH1CP00326 375 aa10.93□□□□□ -0.66
COPA-206ENST00000545266 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
COPA-206ENST00000545266 VASH1Q7L8A9 365 aaPredicted RBP10.93□□□□□ -0.66
COPA-206ENST00000545266 RNF135Q8IUD6 432 aa10.93□□□□□ -0.66
COPA-206ENST00000545266 SNIP1Q8TAD8 396 aaKnown RBP10.93□□□□□ -0.66
COPA-206ENST00000545266 TOR4AQ9NXH8 423 aa10.93□□□□□ -0.66
COPA-206ENST00000545266 TLL2Q9Y6L7 1015 aa10.93□□□□□ -0.66
COPA-206ENST00000545266 NR5A1Q13285 461 aa10.92□□□□□ -0.66
COPA-206ENST00000545266 CCDC85AQ96PX6 553 aaPredicted RBP10.92□□□□□ -0.66
COPA-206ENST00000545266 INTS6LQ5JSJ4 861 aaKnown RBP10.91□□□□□ -0.66
COPA-206ENST00000545266 PLPP7Q8NBV4 271 aa10.91□□□□□ -0.66
COPA-206ENST00000545266 FOXC1Q12948 553 aa10.9□□□□□ -0.66
COPA-206ENST00000545266 TSGA10IPQ3SY00 556 aa10.9□□□□□ -0.66
COPA-206ENST00000545266 SKIP12755 728 aa10.89□□□□□ -0.67
COPA-206ENST00000545266 USP17L5A8MUK1 530 aa10.88□□□□□ -0.67
COPA-206ENST00000545266 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
COPA-206ENST00000545266 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
COPA-206ENST00000545266 ARID3AQ99856 593 aa10.88□□□□□ -0.67
COPA-206ENST00000545266 USP17L3A6NCW0 530 aa10.87□□□□□ -0.67
COPA-206ENST00000545266 USP17L4A6NCW7 530 aa10.87□□□□□ -0.67
COPA-206ENST00000545266 FSHRP23945 695 aa10.87□□□□□ -0.67
COPA-206ENST00000545266 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
COPA-206ENST00000545266 USP17L2Q6R6M4 530 aa10.87□□□□□ -0.67
COPA-206ENST00000545266 USP17L1Q7RTZ2 530 aa10.87□□□□□ -0.67
COPA-206ENST00000545266 ERVH48-1M5A8F1 160 aa10.86□□□□□ -0.67
COPA-206ENST00000545266 NR3C2P08235 984 aa10.86□□□□□ -0.67
COPA-206ENST00000545266 LMOD1P29536 600 aaPredicted RBP10.86□□□□□ -0.67
COPA-206ENST00000545266 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
COPA-206ENST00000545266 PBXIP1Q96AQ6 731 aa10.86□□□□□ -0.67
COPA-206ENST00000545266 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
COPA-206ENST00000545266 ALDH1A1P00352 501 aa10.85□□□□□ -0.67
COPA-206ENST00000545266 KLF16Q9BXK1 252 aaPredicted RBP10.85□□□□□ -0.67
COPA-206ENST00000545266 TNFRSF10AO00220 468 aa10.84□□□□□ -0.67
COPA-206ENST00000545266 SMPD1P17405 629 aa10.84□□□□□ -0.67
COPA-206ENST00000545266 NCOA4Q13772 614 aa10.84□□□□□ -0.67
COPA-206ENST00000545266 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
COPA-206ENST00000545266 CYP4X1Q8N118 509 aa10.84□□□□□ -0.67
COPA-206ENST00000545266 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
COPA-206ENST00000545266 J3QL48 77 aa10.83□□□□□ -0.68
COPA-206ENST00000545266 ERVK-9P63128 1117 aa10.83□□□□□ -0.68
COPA-206ENST00000545266 PCDHB11Q9Y5F2 797 aa10.83□□□□□ -0.68
COPA-206ENST00000545266 PPP1R26Q5T8A7 1209 aaPredicted RBP10.82□□□□□ -0.68
COPA-206ENST00000545266 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
COPA-206ENST00000545266 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.81□□□□□ -0.68
COPA-206ENST00000545266 TTC24A2A3L6 582 aaPredicted RBP10.81□□□□□ -0.68
COPA-206ENST00000545266 LILRA1O75019 489 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 USP4Q13107 963 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 NNTQ13423 1086 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 EML3Q32P44 896 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 DEPDC4Q8N2C3 294 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
COPA-206ENST00000545266 RFX1P22670 979 aa10.8□□□□□ -0.68
COPA-206ENST00000545266 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
COPA-206ENST00000545266 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
COPA-206ENST00000545266 MKRN1Q9UHC7 482 aaKnown RBP10.8□□□□□ -0.68
COPA-206ENST00000545266 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
COPA-206ENST00000545266 ATP5J2-PTCD1G3V325 749 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 ATG7O95352 703 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 SCTRP47872 440 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 ARXQ96QS3 562 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 TMPRSS4Q9NRS4 437 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 PDZRN3Q9UPQ7 1066 aa10.79□□□□□ -0.68
COPA-206ENST00000545266 RAB15P59190 212 aa10.78□□□□□ -0.68
COPA-206ENST00000545266 ZNF784Q8NCA9 323 aaPredicted RBP10.78□□□□□ -0.68
COPA-206ENST00000545266 NOD1Q9Y239 953 aa10.78□□□□□ -0.68
COPA-206ENST00000545266 PCDHGA11Q9Y5H2 935 aa10.78□□□□□ -0.68
COPA-206ENST00000545266 FAM196BA6NMK8 535 aa10.77□□□□□ -0.69
COPA-206ENST00000545266 ELOAQ14241 798 aaKnown RBP10.77□□□□□ -0.69
COPA-206ENST00000545266 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
COPA-206ENST00000545266 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
COPA-206ENST00000545266 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
COPA-206ENST00000545266 DKK1O94907 266 aa10.76□□□□□ -0.69
COPA-206ENST00000545266 MYT1Q01538 1121 aa10.76□□□□□ -0.69
COPA-206ENST00000545266 OXLD1Q5BKU9 147 aa10.76□□□□□ -0.69
COPA-206ENST00000545266 OSBPL3Q9H4L5 887 aa10.76□□□□□ -0.69
COPA-206ENST00000545266 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
COPA-206ENST00000545266 ADD1P35611 737 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms