RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
SPDEF-202ENST00000544425 CALD1Q05682 793 aaKnown RBP20.79■□□□□ 0.92
SPDEF-202ENST00000544425 FANCIQ9NVI1 1328 aa20.79■□□□□ 0.92
SPDEF-202ENST00000544425 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
SPDEF-202ENST00000544425 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
SPDEF-202ENST00000544425 PSME1Q06323 249 aa20.78■□□□□ 0.92
SPDEF-202ENST00000544425 LMOD3Q0VAK6 560 aa20.78■□□□□ 0.92
SPDEF-202ENST00000544425 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
SPDEF-202ENST00000544425 PEAK1Q9H792 1746 aa20.77■□□□□ 0.92
SPDEF-202ENST00000544425 SULT6B1Q6IMI4 303 aa20.77■□□□□ 0.92
SPDEF-202ENST00000544425 AMPHP49418 695 aa20.76■□□□□ 0.91
SPDEF-202ENST00000544425 SOX12O15370 315 aa20.75■□□□□ 0.91
SPDEF-202ENST00000544425 ARHGEF10O15013 1369 aa20.75■□□□□ 0.91
SPDEF-202ENST00000544425 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
SPDEF-202ENST00000544425 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
SPDEF-202ENST00000544425 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
SPDEF-202ENST00000544425 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
SPDEF-202ENST00000544425 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
SPDEF-202ENST00000544425 C1orf167Q5SNV9 1468 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 ZNF853P0CG23 659 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 HOXC9P31274 260 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 IFT57Q9NWB7 429 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 RGPD1P0DJD0 1748 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 DCCP43146 1447 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 KDRP35968 1356 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 HSPA2P54652 639 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 GNAI1P63096 354 aa20.71■□□□□ 0.91
SPDEF-202ENST00000544425 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
SPDEF-202ENST00000544425 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
SPDEF-202ENST00000544425 TMEM94Q12767 1356 aa20.7■□□□□ 0.9
SPDEF-202ENST00000544425 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
SPDEF-202ENST00000544425 FOXO3O43524 673 aa20.69■□□□□ 0.9
SPDEF-202ENST00000544425 MARF1Q9Y4F3 1742 aaKnown RBP20.69■□□□□ 0.9
SPDEF-202ENST00000544425 ATF3P18847 181 aa20.69■□□□□ 0.9
SPDEF-202ENST00000544425 CANXP27824 592 aaKnown RBP20.69■□□□□ 0.9
SPDEF-202ENST00000544425 EYA1Q99502 592 aa20.69■□□□□ 0.9
SPDEF-202ENST00000544425 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
SPDEF-202ENST00000544425 LMTK3Q96Q04 1460 aa20.67■□□□□ 0.9
SPDEF-202ENST00000544425 AAMPQ13685 434 aa20.67■□□□□ 0.9
SPDEF-202ENST00000544425 IP6K1Q92551 441 aa20.67■□□□□ 0.9
SPDEF-202ENST00000544425 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
SPDEF-202ENST00000544425 KRT28Q7Z3Y7 464 aa20.66■□□□□ 0.9
SPDEF-202ENST00000544425 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
SPDEF-202ENST00000544425 MST1RQ04912 1400 aa20.66■□□□□ 0.9
SPDEF-202ENST00000544425 MS4A1P11836 297 aa20.65■□□□□ 0.9
SPDEF-202ENST00000544425 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
SPDEF-202ENST00000544425 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.9
SPDEF-202ENST00000544425 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.89
SPDEF-202ENST00000544425 SSH1Q8WYL5 1049 aa20.64■□□□□ 0.89
SPDEF-202ENST00000544425 NFAT5O94916 1531 aa20.64■□□□□ 0.89
SPDEF-202ENST00000544425 KIF1AQ12756 1690 aa20.64■□□□□ 0.89
SPDEF-202ENST00000544425 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
SPDEF-202ENST00000544425 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
SPDEF-202ENST00000544425 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 SMC4Q9NTJ3 1288 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 KDM2BQ8NHM5 1336 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 GCP02774 474 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
SPDEF-202ENST00000544425 USP19O94966 1318 aa20.61■□□□□ 0.89
SPDEF-202ENST00000544425 FAM83GA6ND36 823 aa20.61■□□□□ 0.89
SPDEF-202ENST00000544425 CENPQQ7L2Z9 268 aaPredicted RBP20.61■□□□□ 0.89
SPDEF-202ENST00000544425 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
SPDEF-202ENST00000544425 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
SPDEF-202ENST00000544425 VAMP4O75379 141 aa20.6■□□□□ 0.89
SPDEF-202ENST00000544425 COG6Q9Y2V7 657 aa20.6■□□□□ 0.89
SPDEF-202ENST00000544425 RBM19Q9Y4C8 960 aaKnown RBP20.6■□□□□ 0.89
SPDEF-202ENST00000544425 SLIT3O75094 1523 aa20.6■□□□□ 0.89
SPDEF-202ENST00000544425 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
SPDEF-202ENST00000544425 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
SPDEF-202ENST00000544425 ARHGEF25Q86VW2 580 aa20.6■□□□□ 0.89
SPDEF-202ENST00000544425 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
SPDEF-202ENST00000544425 MSH6P52701 1360 aa20.59■□□□□ 0.89
SPDEF-202ENST00000544425 CHL1O00533 1208 aa20.58■□□□□ 0.89
SPDEF-202ENST00000544425 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
SPDEF-202ENST00000544425 KIF16BQ96L93 1317 aa20.58■□□□□ 0.88
SPDEF-202ENST00000544425 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.88
SPDEF-202ENST00000544425 RLBP1P12271 317 aa20.58■□□□□ 0.88
SPDEF-202ENST00000544425 DZIP1LQ8IYY4 767 aaKnown RBP20.58■□□□□ 0.88
SPDEF-202ENST00000544425 CLUAP1Q96AJ1 413 aa20.58■□□□□ 0.88
SPDEF-202ENST00000544425 PHRF1Q9P1Y6 1649 aaKnown RBP20.57■□□□□ 0.88
SPDEF-202ENST00000544425 TRPM3Q9HCF6 1732 aaPredicted RBP20.57■□□□□ 0.88
SPDEF-202ENST00000544425 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
SPDEF-202ENST00000544425 ATF7IPQ6VMQ6 1270 aa20.56■□□□□ 0.88
SPDEF-202ENST00000544425 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
SPDEF-202ENST00000544425 NOB1Q9ULX3 412 aaKnown RBP20.56■□□□□ 0.88
SPDEF-202ENST00000544425 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
SPDEF-202ENST00000544425 MCM10Q7L590 875 aa20.55■□□□□ 0.88
SPDEF-202ENST00000544425 TNNQ9UQP3 1299 aa20.55■□□□□ 0.88
SPDEF-202ENST00000544425 CRB1P82279 1406 aa20.55■□□□□ 0.88
SPDEF-202ENST00000544425 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
SPDEF-202ENST00000544425 TRIM27P14373 513 aa20.54■□□□□ 0.88
SPDEF-202ENST00000544425 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
SPDEF-202ENST00000544425 MVPQ14764 893 aaKnown RBP20.54■□□□□ 0.88
SPDEF-202ENST00000544425 TWISTNBQ3B726 338 aaPredicted RBP20.54■□□□□ 0.88
SPDEF-202ENST00000544425 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
SPDEF-202ENST00000544425 LMOD2Q6P5Q4 547 aa20.54■□□□□ 0.88
SPDEF-202ENST00000544425 FTSJ3Q8IY81 847 aaKnown RBP20.54■□□□□ 0.88
SPDEF-202ENST00000544425 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms