RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
GABPB1-206ENST00000543881 CABP2Q9NPB3 220 aa17.05■□□□□ 0.32
GABPB1-206ENST00000543881 QRICH2Q9H0J4 1663 aa17.05■□□□□ 0.32
GABPB1-206ENST00000543881 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
GABPB1-206ENST00000543881 PROM2Q8N271 834 aa17.04■□□□□ 0.32
GABPB1-206ENST00000543881 SLIT3O75094 1523 aa17.03■□□□□ 0.32
GABPB1-206ENST00000543881 USP6P35125 1406 aa17.03■□□□□ 0.32
GABPB1-206ENST00000543881 ZBTB7AO95365 584 aa17.03■□□□□ 0.32
GABPB1-206ENST00000543881 COL18A1P39060 1754 aa17.03■□□□□ 0.32
GABPB1-206ENST00000543881 WNK3Q9BYP7 1800 aa17.02■□□□□ 0.32
GABPB1-206ENST00000543881 MARCH10Q8NA82 808 aaPredicted RBP17.02■□□□□ 0.32
GABPB1-206ENST00000543881 CABP1Q9NZU7 370 aa17.02■□□□□ 0.32
GABPB1-206ENST00000543881 MYOM1P52179 1685 aa17.02■□□□□ 0.31
GABPB1-206ENST00000543881 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
GABPB1-206ENST00000543881 PTGER2P43116 358 aa17.01■□□□□ 0.31
GABPB1-206ENST00000543881 AXIN2Q9Y2T1 843 aa17.01■□□□□ 0.31
GABPB1-206ENST00000543881 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
GABPB1-206ENST00000543881 CDCA7Q9BWT1 371 aaPredicted RBP17■□□□□ 0.31
GABPB1-206ENST00000543881 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
GABPB1-206ENST00000543881 BCL9O00512 1426 aa17■□□□□ 0.31
GABPB1-206ENST00000543881 PIK3C2AO00443 1686 aa17■□□□□ 0.31
GABPB1-206ENST00000543881 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
GABPB1-206ENST00000543881 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
GABPB1-206ENST00000543881 CPSF1Q10570 1443 aaKnown RBP16.98■□□□□ 0.31
GABPB1-206ENST00000543881 TXNRD1Q16881 649 aa16.98■□□□□ 0.31
GABPB1-206ENST00000543881 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
GABPB1-206ENST00000543881 RGPD5Q99666 1765 aa16.98■□□□□ 0.31
GABPB1-206ENST00000543881 CARD10Q9BWT7 1032 aa16.97■□□□□ 0.31
GABPB1-206ENST00000543881 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
GABPB1-206ENST00000543881 SLC15A2Q16348 729 aa16.96■□□□□ 0.31
GABPB1-206ENST00000543881 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.31
GABPB1-206ENST00000543881 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
GABPB1-206ENST00000543881 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
GABPB1-206ENST00000543881 EXOC5O00471 708 aa16.95■□□□□ 0.3
GABPB1-206ENST00000543881 SYT17Q9BSW7 474 aa16.95■□□□□ 0.3
GABPB1-206ENST00000543881 SOX12O15370 315 aa16.94■□□□□ 0.3
GABPB1-206ENST00000543881 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
GABPB1-206ENST00000543881 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
GABPB1-206ENST00000543881 CHD4Q14839 1912 aa16.92■□□□□ 0.3
GABPB1-206ENST00000543881 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
GABPB1-206ENST00000543881 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
GABPB1-206ENST00000543881 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
GABPB1-206ENST00000543881 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
GABPB1-206ENST00000543881 UTRNP46939 3433 aa16.9■□□□□ 0.3
GABPB1-206ENST00000543881 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
GABPB1-206ENST00000543881 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
GABPB1-206ENST00000543881 ACSBG1Q96GR2 724 aa16.89■□□□□ 0.29
GABPB1-206ENST00000543881 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
GABPB1-206ENST00000543881 NFAT5O94916 1531 aa16.88■□□□□ 0.29
GABPB1-206ENST00000543881 ARXQ96QS3 562 aa16.88■□□□□ 0.29
GABPB1-206ENST00000543881 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
GABPB1-206ENST00000543881 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
GABPB1-206ENST00000543881 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
GABPB1-206ENST00000543881 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
GABPB1-206ENST00000543881 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
GABPB1-206ENST00000543881 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
GABPB1-206ENST00000543881 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
GABPB1-206ENST00000543881 ABCC6O95255 1503 aa16.86■□□□□ 0.29
GABPB1-206ENST00000543881 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
GABPB1-206ENST00000543881 BTAF1O14981 1849 aa16.84■□□□□ 0.29
GABPB1-206ENST00000543881 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
GABPB1-206ENST00000543881 NLRP2Q9NX02 1062 aa16.84■□□□□ 0.29
GABPB1-206ENST00000543881 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
GABPB1-206ENST00000543881 IL2RBP14784 551 aa16.83■□□□□ 0.28
GABPB1-206ENST00000543881 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
GABPB1-206ENST00000543881 ERBB3P21860 1342 aa16.83■□□□□ 0.28
GABPB1-206ENST00000543881 CD163L1Q9NR16 1453 aa16.82■□□□□ 0.28
GABPB1-206ENST00000543881 GPR162Q16538 588 aa16.81■□□□□ 0.28
GABPB1-206ENST00000543881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.81■□□□□ 0.28
GABPB1-206ENST00000543881 LRRC4BQ9NT99 713 aa16.81■□□□□ 0.28
GABPB1-206ENST00000543881 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
GABPB1-206ENST00000543881 LTN1O94822 1766 aa16.8■□□□□ 0.28
GABPB1-206ENST00000543881 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
GABPB1-206ENST00000543881 USP31Q70CQ4 1352 aa16.79■□□□□ 0.28
GABPB1-206ENST00000543881 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
GABPB1-206ENST00000543881 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
GABPB1-206ENST00000543881 NME9Q86XW9 330 aa16.78■□□□□ 0.28
GABPB1-206ENST00000543881 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
GABPB1-206ENST00000543881 SLC16A10Q8TF71 515 aa16.78■□□□□ 0.28
GABPB1-206ENST00000543881 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
GABPB1-206ENST00000543881 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
GABPB1-206ENST00000543881 TESK2Q96S53 571 aa16.77■□□□□ 0.28
GABPB1-206ENST00000543881 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.27
GABPB1-206ENST00000543881 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
GABPB1-206ENST00000543881 POLD1P28340 1107 aa16.76■□□□□ 0.27
GABPB1-206ENST00000543881 SLC27A3Q5K4L6 730 aa16.76■□□□□ 0.27
GABPB1-206ENST00000543881 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
GABPB1-206ENST00000543881 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
GABPB1-206ENST00000543881 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
GABPB1-206ENST00000543881 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
GABPB1-206ENST00000543881 DDX54Q8TDD1 881 aaKnown RBP16.74■□□□□ 0.27
GABPB1-206ENST00000543881 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
GABPB1-206ENST00000543881 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
GABPB1-206ENST00000543881 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
GABPB1-206ENST00000543881 KCNQ4P56696 695 aa16.73■□□□□ 0.27
GABPB1-206ENST00000543881 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
GABPB1-206ENST00000543881 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
GABPB1-206ENST00000543881 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
GABPB1-206ENST00000543881 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
GABPB1-206ENST00000543881 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms