RNA–Protein interactions for RNA: ENST00000542600.1

DEFB109F-202, Transcript of defensin beta 109F (pseudogene), humanhuman

TSL 2 BASIC

Gene DEFB109F, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB109F-202ENST00000542600 FAM196BA6NMK8 535 aa10.32□□□□□ -0.76
DEFB109F-202ENST00000542600 PATL2C9JE40 543 aaKnown RBP10.32□□□□□ -0.76
DEFB109F-202ENST00000542600 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
DEFB109F-202ENST00000542600 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
DEFB109F-202ENST00000542600 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
DEFB109F-202ENST00000542600 ATP5J2-PTCD1G3V325 749 aa10.31□□□□□ -0.76
DEFB109F-202ENST00000542600 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
DEFB109F-202ENST00000542600 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
DEFB109F-202ENST00000542600 C1QTNF2Q9BXJ5 285 aa10.31□□□□□ -0.76
DEFB109F-202ENST00000542600 SH3BP2P78314 561 aa10.3□□□□□ -0.76
DEFB109F-202ENST00000542600 KCNA1Q09470 495 aa10.3□□□□□ -0.76
DEFB109F-202ENST00000542600 EML3Q32P44 896 aa10.3□□□□□ -0.76
DEFB109F-202ENST00000542600 ZMIZ1Q9ULJ6 1067 aa10.3□□□□□ -0.76
DEFB109F-202ENST00000542600 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
DEFB109F-202ENST00000542600 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L21D6R901 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 ZBTB24O43167 697 aaPredicted RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 RASA1P20936 1047 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 GGCXP38435 758 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 CRTC2Q53ET0 693 aaPredicted RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
DEFB109F-202ENST00000542600 PTK7Q13308 1070 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 STK32AQ8WU08 396 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 RNF166Q96A37 237 aaPredicted RBP10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 CDV3Q9UKY7 258 aaKnown RBP10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
DEFB109F-202ENST00000542600 TRIM32Q13049 653 aa10.26□□□□□ -0.77
DEFB109F-202ENST00000542600 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
DEFB109F-202ENST00000542600 NOD1Q9Y239 953 aa10.26□□□□□ -0.77
DEFB109F-202ENST00000542600 ESPNB1AK53 854 aa10.25□□□□□ -0.77
DEFB109F-202ENST00000542600 PCDH10Q9P2E7 1040 aa10.25□□□□□ -0.77
DEFB109F-202ENST00000542600 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 PLA2G2CQ5R387 149 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 OGFOD1Q8N543 542 aa10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
DEFB109F-202ENST00000542600 WNT7BP56706 349 aa10.23□□□□□ -0.77
DEFB109F-202ENST00000542600 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
DEFB109F-202ENST00000542600 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
DEFB109F-202ENST00000542600 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
DEFB109F-202ENST00000542600 VARSP26640 1264 aaKnown RBP10.22□□□□□ -0.77
DEFB109F-202ENST00000542600 RPIAP49247 311 aa10.22□□□□□ -0.77
DEFB109F-202ENST00000542600 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
DEFB109F-202ENST00000542600 DNAAF2Q9NVR5 837 aaKnown RBP10.22□□□□□ -0.77
DEFB109F-202ENST00000542600 CLDN10P78369 228 aa10.21□□□□□ -0.77
DEFB109F-202ENST00000542600 SKOR1P84550 965 aa10.21□□□□□ -0.77
DEFB109F-202ENST00000542600 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
DEFB109F-202ENST00000542600 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.77
DEFB109F-202ENST00000542600 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.21□□□□□ -0.77
DEFB109F-202ENST00000542600 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
DEFB109F-202ENST00000542600 SIRT1Q96EB6 747 aa10.2□□□□□ -0.78
DEFB109F-202ENST00000542600 MAP4K5Q9Y4K4 846 aa10.2□□□□□ -0.78
DEFB109F-202ENST00000542600 PCDHB11Q9Y5F2 797 aa10.2□□□□□ -0.78
DEFB109F-202ENST00000542600 GTF2IP78347 998 aa10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 DPYDQ12882 1025 aa10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 USP4Q13107 963 aa10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 TMCO4Q5TGY1 634 aa10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 ZNF594Q96JF6 807 aaPredicted RBP10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 KCTD15Q96SI1 283 aaPredicted RBP10.19□□□□□ -0.78
DEFB109F-202ENST00000542600 ZBTB7BO15156 539 aaPredicted RBP10.18□□□□□ -0.78
DEFB109F-202ENST00000542600 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
DEFB109F-202ENST00000542600 SIX5Q8N196 739 aa10.18□□□□□ -0.78
DEFB109F-202ENST00000542600 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
DEFB109F-202ENST00000542600 DKK1O94907 266 aa10.17□□□□□ -0.78
DEFB109F-202ENST00000542600 KIAA1024Q9UPX6 916 aa10.17□□□□□ -0.78
DEFB109F-202ENST00000542600 IVNS1ABPQ9Y6Y0 642 aa10.17□□□□□ -0.78
DEFB109F-202ENST00000542600 CD2BP2O95400 341 aaKnown RBP10.16□□□□□ -0.78
DEFB109F-202ENST00000542600 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
DEFB109F-202ENST00000542600 VASH1Q7L8A9 365 aaPredicted RBP10.16□□□□□ -0.78
DEFB109F-202ENST00000542600 EHBP1Q8NDI1 1231 aa10.16□□□□□ -0.78
DEFB109F-202ENST00000542600 GNEQ9Y223 722 aaKnown RBP10.16□□□□□ -0.78
DEFB109F-202ENST00000542600 SSFA2P28290 1259 aa10.15□□□□□ -0.78
DEFB109F-202ENST00000542600 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
DEFB109F-202ENST00000542600 SLAIN2Q9P270 581 aa10.15□□□□□ -0.78
DEFB109F-202ENST00000542600 RBM19Q9Y4C8 960 aaKnown RBP10.15□□□□□ -0.78
DEFB109F-202ENST00000542600 PCDHGA11Q9Y5H2 935 aa10.15□□□□□ -0.78
DEFB109F-202ENST00000542600 SEC13P55735 322 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms