RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM163AQ96GL9 167 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 CFAP53Q96M91 514 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 ANKRD26Q9UPS8 1709 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 TMEM131LA2VDJ0 1609 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 NLRP1Q9C000 1473 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 PANK1Q8TE04 598 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 PREX1Q8TCU6 1659 aa6.68□□□□□ -1.34
ATPAF1-212ENST00000542495 CT47B1P0C2W7 299 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 RGS3P49796 1198 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 IDI1Q13907 227 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 ZNF467Q7Z7K2 595 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 PMFBP1Q8TBY8 1022 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 MFRPQ9BY79 579 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 SLC52A1Q9NWF4 448 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 RRP7AQ9Y3A4 280 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 CD163L1Q9NR16 1453 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 A0A1W2PP64 1363 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 RLBP1P12271 317 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 TNNT2P45379 298 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 PLEKHF1Q96S99 279 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 MYH16Q9H6N6 1097 aa6.67□□□□□ -1.34
ATPAF1-212ENST00000542495 MYO5BQ9ULV0 1848 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 ATAD2Q6PL18 1390 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 PDAP1Q13442 181 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 MLECQ14165 292 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 NFKBIBQ15653 356 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 CABP2Q9NPB3 220 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 PCDHB15Q9Y5E8 787 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 IL16Q14005 1332 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 FER1L4A9Z1Z3 1794 aa6.66□□□□□ -1.34
ATPAF1-212ENST00000542495 PNPLA6Q8IY17 1366 aa6.65□□□□□ -1.34
ATPAF1-212ENST00000542495 CDC42BPGQ6DT37 1551 aa6.65□□□□□ -1.34
ATPAF1-212ENST00000542495 CANXP27824 592 aaKnown RBP6.65□□□□□ -1.34
ATPAF1-212ENST00000542495 HSPA2P54652 639 aa6.65□□□□□ -1.34
ATPAF1-212ENST00000542495 NEUROD2Q15784 382 aa6.65□□□□□ -1.34
ATPAF1-212ENST00000542495 YTHDC2Q9H6S0 1430 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-212ENST00000542495 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 SLC4A3P48751 1232 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 FRAT1Q92837 279 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 SLC24A3Q9HC58 644 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 TNNQ9UQP3 1299 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 ALKQ9UM73 1620 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 TESPA1A2RU30 521 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 SEMA3EO15041 775 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 FYB1O15117 783 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 SEC24BO95487 1268 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 TMPOP42166 694 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 MVPQ14764 893 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 NUTM2DQ5VT03 806 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 TRIM35Q9UPQ4 493 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 DLC1Q96QB1 1528 aa6.64□□□□□ -1.35
ATPAF1-212ENST00000542495 REREQ9P2R6 1566 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 E2F4Q16254 413 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 ZKSCAN2Q63HK3 967 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 RWDD1Q9H446 243 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 TERF2IPQ9NYB0 399 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 PCDHB8Q9UN66 801 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 PCDHB13Q9Y5F0 798 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 KIF20BQ96Q89 1820 aa6.63□□□□□ -1.35
ATPAF1-212ENST00000542495 PPP1R37O75864 691 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 HDAC1Q13547 482 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 SETD1AO15047 1707 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 AGLP35573 1532 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 SETD1BQ9UPS6 1966 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 EXOSC9Q06265 439 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 CDAN1Q8IWY9 1227 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 DZIP1LQ8IYY4 767 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 CERKQ8TCT0 537 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 PRAM1Q96QH2 718 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 GGNBP2Q9H3C7 697 aa6.62□□□□□ -1.35
ATPAF1-212ENST00000542495 PPIP5K1Q6PFW1 1433 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 ATP7BP35670 1465 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 TRIM27P14373 513 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 SSH1Q8WYL5 1049 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 TSR2Q969E8 191 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 TSPYL2Q9H2G4 693 aaPredicted RBP6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 PNNQ9H307 717 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 STK26Q9P289 416 aa6.61□□□□□ -1.35
ATPAF1-212ENST00000542495 DIAPH1O60610 1272 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 CEBPAP49715 358 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 PSEN1P49768 467 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 SAFB2Q14151 953 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 ASTLQ6HA08 431 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 CDK19Q9BWU1 502 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 ANTXR1Q9H6X2 564 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 MINK1Q8N4C8 1332 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 FAM135BQ49AJ0 1406 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 LRRC7Q96NW7 1537 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 SPATA31D1Q6ZQQ2 1576 aa6.6□□□□□ -1.35
ATPAF1-212ENST00000542495 A2ML1A8K2U0 1454 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms