RNA–Protein interactions for RNA: ENST00000542322.5

GRAMD2B-218, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-218ENST00000542322 RTN4Q9NQC3 1192 aaKnown RBP22.7■■□□□ 1.22
GRAMD2B-218ENST00000542322 CPS1P31327 1500 aa22.7■■□□□ 1.22
GRAMD2B-218ENST00000542322 ANKRD45Q5TZF3 282 aa22.69■■□□□ 1.22
GRAMD2B-218ENST00000542322 KIF16BQ96L93 1317 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 FOXO3O43524 673 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 NECTIN2Q92692 538 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 PPP6R1Q9UPN7 881 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 VAMP4O75379 141 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 EIF4A2Q14240 407 aaKnown RBP22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
GRAMD2B-218ENST00000542322 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
GRAMD2B-218ENST00000542322 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
GRAMD2B-218ENST00000542322 ADGRB2O60241 1585 aa22.66■■□□□ 1.22
GRAMD2B-218ENST00000542322 GNAI1P63096 354 aa22.66■■□□□ 1.22
GRAMD2B-218ENST00000542322 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
GRAMD2B-218ENST00000542322 ZBTB40Q9NUA8 1239 aa22.65■■□□□ 1.22
GRAMD2B-218ENST00000542322 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
GRAMD2B-218ENST00000542322 TMEM2Q9UHN6 1383 aa22.65■■□□□ 1.22
GRAMD2B-218ENST00000542322 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
GRAMD2B-218ENST00000542322 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
GRAMD2B-218ENST00000542322 IL16Q14005 1332 aa22.63■■□□□ 1.21
GRAMD2B-218ENST00000542322 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
GRAMD2B-218ENST00000542322 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
GRAMD2B-218ENST00000542322 ATP7BP35670 1465 aa22.62■■□□□ 1.21
GRAMD2B-218ENST00000542322 MRPL50Q8N5N7 158 aaKnown RBP22.62■■□□□ 1.21
GRAMD2B-218ENST00000542322 AMPHP49418 695 aa22.61■■□□□ 1.21
GRAMD2B-218ENST00000542322 BECN1Q14457 450 aa22.61■■□□□ 1.21
GRAMD2B-218ENST00000542322 SLC4A10Q6U841 1118 aa22.6■■□□□ 1.21
GRAMD2B-218ENST00000542322 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
GRAMD2B-218ENST00000542322 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
GRAMD2B-218ENST00000542322 IFT57Q9NWB7 429 aa22.59■■□□□ 1.21
GRAMD2B-218ENST00000542322 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
GRAMD2B-218ENST00000542322 AGLP35573 1532 aa22.58■■□□□ 1.21
GRAMD2B-218ENST00000542322 NLRP6P59044 892 aa22.58■■□□□ 1.2
GRAMD2B-218ENST00000542322 CFAP44Q96MT7 982 aa22.58■■□□□ 1.2
GRAMD2B-218ENST00000542322 FOXD4L1Q9NU39 408 aa22.58■■□□□ 1.2
GRAMD2B-218ENST00000542322 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
GRAMD2B-218ENST00000542322 MED14O60244 1454 aa22.57■■□□□ 1.2
GRAMD2B-218ENST00000542322 ALDH1L2Q3SY69 923 aa22.57■■□□□ 1.2
GRAMD2B-218ENST00000542322 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
GRAMD2B-218ENST00000542322 TBC1D2Q9BYX2 928 aa22.56■■□□□ 1.2
GRAMD2B-218ENST00000542322 NRXN3Q9Y4C0 1643 aa22.56■■□□□ 1.2
GRAMD2B-218ENST00000542322 HDAC1Q13547 482 aaPredicted RBP22.56■■□□□ 1.2
GRAMD2B-218ENST00000542322 CHD1LQ86WJ1 897 aa22.56■■□□□ 1.2
GRAMD2B-218ENST00000542322 ZBTB7BO15156 539 aaPredicted RBP22.55■■□□□ 1.2
GRAMD2B-218ENST00000542322 IL27Q8NEV9 243 aa22.55■■□□□ 1.2
GRAMD2B-218ENST00000542322 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
GRAMD2B-218ENST00000542322 LMOD3Q0VAK6 560 aa22.54■■□□□ 1.2
GRAMD2B-218ENST00000542322 AAMPQ13685 434 aa22.54■■□□□ 1.2
GRAMD2B-218ENST00000542322 LMOD2Q6P5Q4 547 aa22.54■■□□□ 1.2
GRAMD2B-218ENST00000542322 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
GRAMD2B-218ENST00000542322 MAP3K19Q56UN5 1328 aa22.54■■□□□ 1.2
GRAMD2B-218ENST00000542322 F6X3S4 739 aa22.53■■□□□ 1.2
GRAMD2B-218ENST00000542322 SMC5Q8IY18 1101 aa22.53■■□□□ 1.2
GRAMD2B-218ENST00000542322 RTF1Q92541 710 aaKnown RBP22.53■■□□□ 1.2
GRAMD2B-218ENST00000542322 KCNA6P17658 529 aa22.52■■□□□ 1.2
GRAMD2B-218ENST00000542322 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
GRAMD2B-218ENST00000542322 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
GRAMD2B-218ENST00000542322 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
GRAMD2B-218ENST00000542322 DLC1Q96QB1 1528 aa22.51■■□□□ 1.19
GRAMD2B-218ENST00000542322 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
GRAMD2B-218ENST00000542322 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
GRAMD2B-218ENST00000542322 SLC4A2P04920 1241 aa22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 TSPYL4Q9UJ04 414 aa22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 SMARCA5O60264 1052 aaPredicted RBP22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 GSE1Q14687 1217 aa22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 MTHFSDQ2M296 383 aaKnown RBP22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 NUCB1Q02818 461 aa22.5■■□□□ 1.19
GRAMD2B-218ENST00000542322 KIF13AQ9H1H9 1805 aa22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 ABTB2Q8N961 1025 aa22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 SETD1AO15047 1707 aaKnown RBP22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 PTPRUQ92729 1446 aa22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
GRAMD2B-218ENST00000542322 GZF1Q9H116 711 aaPredicted RBP22.48■■□□□ 1.19
GRAMD2B-218ENST00000542322 CDK12Q9NYV4 1490 aaPredicted RBP22.48■■□□□ 1.19
GRAMD2B-218ENST00000542322 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
GRAMD2B-218ENST00000542322 G2E3Q7L622 706 aa22.47■■□□□ 1.19
GRAMD2B-218ENST00000542322 BRPF3Q9ULD4 1205 aa22.47■■□□□ 1.19
GRAMD2B-218ENST00000542322 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
GRAMD2B-218ENST00000542322 OTUD7AQ8TE49 926 aaPredicted RBP22.46■■□□□ 1.19
GRAMD2B-218ENST00000542322 EYA1Q99502 592 aa22.46■■□□□ 1.19
GRAMD2B-218ENST00000542322 API5Q9BZZ5 524 aaKnown RBP22.45■■□□□ 1.18
GRAMD2B-218ENST00000542322 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
GRAMD2B-218ENST00000542322 MEIS3Q99687 375 aa22.45■■□□□ 1.18
GRAMD2B-218ENST00000542322 USP6P35125 1406 aa22.44■■□□□ 1.18
GRAMD2B-218ENST00000542322 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
GRAMD2B-218ENST00000542322 RBM42Q9BTD8 480 aaKnown RBP22.43■■□□□ 1.18
GRAMD2B-218ENST00000542322 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
GRAMD2B-218ENST00000542322 THEMISQ8N1K5 641 aaPredicted RBP22.43■■□□□ 1.18
GRAMD2B-218ENST00000542322 REREQ9P2R6 1566 aa22.43■■□□□ 1.18
GRAMD2B-218ENST00000542322 PLEKHG3A1L390 1219 aa22.42■■□□□ 1.18
GRAMD2B-218ENST00000542322 HSP90AA1P07900 732 aaKnown RBP22.42■■□□□ 1.18
GRAMD2B-218ENST00000542322 TSHZ3Q63HK5 1081 aa22.41■■□□□ 1.18
GRAMD2B-218ENST00000542322 DLG5Q8TDM6 1919 aa22.41■■□□□ 1.18
GRAMD2B-218ENST00000542322 PLEKHG1Q9ULL1 1385 aa22.4■■□□□ 1.18
GRAMD2B-218ENST00000542322 HSCBQ8IWL3 235 aa22.4■■□□□ 1.18
GRAMD2B-218ENST00000542322 ABCC4O15439 1325 aa22.4■■□□□ 1.18
GRAMD2B-218ENST00000542322 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
GRAMD2B-218ENST00000542322 CHL1O00533 1208 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms