RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SLC12A5Q9H2X9 1139 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 RIPK4P57078 832 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 NGEFQ8N5V2 710 aa6.56□□□□□ -1.36
PROM1-220ENST00000540805 ANKRD36BQ8N2N9 1353 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 IGSF3O75054 1194 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 FTSJ3Q8IY81 847 aaKnown RBP6.55□□□□□ -1.36
PROM1-220ENST00000540805 PANK1Q8TE04 598 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 NAP1L2Q9ULW6 460 aaPredicted RBP6.55□□□□□ -1.36
PROM1-220ENST00000540805 A0A1W2PP64 1363 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 ESPNB1AK53 854 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 ABCC11Q96J66 1382 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 XRN1Q8IZH2 1706 aaKnown RBP6.55□□□□□ -1.36
PROM1-220ENST00000540805 APBB1O00213 710 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 TRAK2O60296 914 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 POLR3AO14802 1390 aaPredicted RBP6.55□□□□□ -1.36
PROM1-220ENST00000540805 CDC42BPGQ6DT37 1551 aa6.55□□□□□ -1.36
PROM1-220ENST00000540805 PTPRUQ92729 1446 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 MORC1Q86VD1 984 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 NALCNQ8IZF0 1738 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 NGDNQ8NEJ9 315 aaKnown RBP6.54□□□□□ -1.36
PROM1-220ENST00000540805 TSC1Q92574 1164 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 PDCL3Q9H2J4 239 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 PDZRN3Q9UPQ7 1066 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 CPSF1Q10570 1443 aaKnown RBP6.54□□□□□ -1.36
PROM1-220ENST00000540805 SETD1BQ9UPS6 1966 aaKnown RBP6.54□□□□□ -1.36
PROM1-220ENST00000540805 DDX11L8A8MPP1 907 aa6.54□□□□□ -1.36
PROM1-220ENST00000540805 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
PROM1-220ENST00000540805 ISY1Q9ULR0 285 aaKnown RBP6.54□□□□□ -1.36
PROM1-220ENST00000540805 CALD1Q05682 793 aaKnown RBP6.53□□□□□ -1.36
PROM1-220ENST00000540805 GRPEL1Q9HAV7 217 aa6.53□□□□□ -1.36
PROM1-220ENST00000540805 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
PROM1-220ENST00000540805 TRIM44Q96DX7 344 aaPredicted RBP6.53□□□□□ -1.36
PROM1-220ENST00000540805 TMEM2Q9UHN6 1383 aa6.53□□□□□ -1.36
PROM1-220ENST00000540805 PHF23Q9BUL5 403 aaPredicted RBP6.53□□□□□ -1.36
PROM1-220ENST00000540805 DMRT2Q9Y5R5 561 aa6.53□□□□□ -1.36
PROM1-220ENST00000540805 EID1Q9Y6B2 187 aa6.53□□□□□ -1.36
PROM1-220ENST00000540805 RGPD8O14715 1765 aaPredicted RBP6.52□□□□□ -1.37
PROM1-220ENST00000540805 ATP7BP35670 1465 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 HSCBQ8IWL3 235 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 RWDD1Q9H446 243 aaPredicted RBP6.52□□□□□ -1.37
PROM1-220ENST00000540805 FAM135BQ49AJ0 1406 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.52□□□□□ -1.37
PROM1-220ENST00000540805 CABP2Q9NPB3 220 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 TNRQ92752 1358 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 U2AF1L5P0DN76 240 aaPredicted RBP6.52□□□□□ -1.37
PROM1-220ENST00000540805 U2AF1Q01081 240 aaKnown RBP eCLIP6.52□□□□□ -1.37
PROM1-220ENST00000540805 PRAM1Q96QH2 718 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 C22orf23Q9BZE7 217 aa6.52□□□□□ -1.37
PROM1-220ENST00000540805 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 MAP2P11137 1827 aaKnown RBP6.51□□□□□ -1.37
PROM1-220ENST00000540805 TPM2P07951 284 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
PROM1-220ENST00000540805 R3HCC1Q9Y3T6 440 aaKnown RBP6.51□□□□□ -1.37
PROM1-220ENST00000540805 PCDHB15Q9Y5E8 787 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 PNPLA6Q8IY17 1366 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 USP54Q70EL1 1684 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 ZNF830Q96NB3 372 aaPredicted RBP6.51□□□□□ -1.37
PROM1-220ENST00000540805 RGPD1P0DJD0 1748 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 LTKP29376 864 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 WWC1Q8IX03 1113 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 ROBO2Q9HCK4 1378 aa6.51□□□□□ -1.37
PROM1-220ENST00000540805 PEAK1Q9H792 1746 aa6.5□□□□□ -1.37
PROM1-220ENST00000540805 RARSP54136 660 aaKnown RBP6.5□□□□□ -1.37
PROM1-220ENST00000540805 NSD2O96028 1365 aa6.5□□□□□ -1.37
PROM1-220ENST00000540805 PLEKHG1Q9ULL1 1385 aa6.5□□□□□ -1.37
PROM1-220ENST00000540805 WAPLQ7Z5K2 1190 aa6.5□□□□□ -1.37
PROM1-220ENST00000540805 EVC2Q86UK5 1308 aa6.5□□□□□ -1.37
PROM1-220ENST00000540805 RTF1Q92541 710 aaKnown RBP6.5□□□□□ -1.37
PROM1-220ENST00000540805 MPNDQ8N594 471 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 SSH2Q76I76 1423 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 CHD2O14647 1828 aaKnown RBP6.49□□□□□ -1.37
PROM1-220ENST00000540805 DIP2AQ14689 1571 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 RLBP1P12271 317 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 HDGFL2Q7Z4V5 671 aaPredicted RBP6.49□□□□□ -1.37
PROM1-220ENST00000540805 CEP170BQ9Y4F5 1589 aaPredicted RBP6.49□□□□□ -1.37
PROM1-220ENST00000540805 FYB1O15117 783 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 PTMSP20962 102 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 NCBP3Q53F19 620 aaKnown RBP6.49□□□□□ -1.37
PROM1-220ENST00000540805 ANP32BQ92688 251 aaKnown RBP6.49□□□□□ -1.37
PROM1-220ENST00000540805 SIRT1Q96EB6 747 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 GBP4Q96PP9 640 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 TNNQ9UQP3 1299 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 PRR36Q9H6K5 1346 aa6.49□□□□□ -1.37
PROM1-220ENST00000540805 KCNJ4P48050 445 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 XPCQ01831 940 aaPredicted RBP6.48□□□□□ -1.37
PROM1-220ENST00000540805 CERS3Q8IU89 383 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 SKOR2Q2VWA4 1001 aaPredicted RBP6.48□□□□□ -1.37
PROM1-220ENST00000540805 PLEKHF1Q96S99 279 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 ZNF692Q9BU19 519 aaPredicted RBP6.48□□□□□ -1.37
PROM1-220ENST00000540805 BCL2L13Q9BXK5 485 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 CHMP4AQ9BY43 222 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 FOXD4L1Q9NU39 408 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 NCOA3Q9Y6Q9 1424 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 CEBPAP49715 358 aaPredicted RBP6.48□□□□□ -1.37
PROM1-220ENST00000540805 MVPQ14764 893 aaKnown RBP6.48□□□□□ -1.37
PROM1-220ENST00000540805 CDK19Q9BWU1 502 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 ATAD2Q6PL18 1390 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 DLG5Q8TDM6 1919 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms