RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SPATA31A6	Q5VVP1	1343 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	CANX	P27824	592 aa	Known RBP	7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	CALD1	Q05682	793 aa	Known RBP	7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	STRN4	Q9NRL3	753 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	IQGAP1	P46940	1657 aa		7.19	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	SLFN5	Q08AF3	891 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	LMOD3	Q0VAK6	560 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	BRINP3	Q76B58	766 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	GGNBP2	Q9H3C7	697 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	BLM	P54132	1417 aa	Predicted RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ZNF142	P52746	1687 aa	Predicted RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NEUROD2	Q15784	382 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	C1orf141	Q5JVX7	400 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	UBR1	Q8IWV7	1749 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TAT	P17735	454 aa	Predicted RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ZC3H6	P61129	1189 aa	Known RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	C8orf37	Q96NL8	207 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	PANK2	Q9BZ23	570 aa		7.18	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	DIAPH1	O60610	1272 aa	Known RBP	7.17	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	BECN1	Q14457	450 aa		7.17	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.17	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.17	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NSD3	Q9BZ95	1437 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ILDR2	Q71H61	639 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	BCL2L13	Q9BXK5	485 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TNN	Q9UQP3	1299 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	SBNO1	A3KN83	1393 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	EDC4	Q6P2E9	1401 aa	Known RBP	7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	XRCC6	P12956	609 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	C1orf167	Q5SNV9	1468 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	NRXN1	Q9ULB1	1477 aa		7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	HSP90AB1	P08238	724 aa	Known RBP	7.16	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	ZNF521	Q96K83	1311 aa		7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	CLUAP1	Q96AJ1	413 aa		7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TRPC5	Q9UL62	973 aa	Predicted RBP	7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	SPG7	Q9UQ90	795 aa		7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	RRP7A	Q9Y3A4	280 aa	Known RBP	7.15	□□□□□ -1.26
RAPGEF4-215	ENST00000540783	TBC1D2	Q9BYX2	928 aa		7.15	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	GC	P02774	474 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	AMER1	Q5JTC6	1135 aa	Predicted RBP	7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	L1TD1	Q5T7N2	865 aa	Known RBP	7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	LRRC7	Q96NW7	1537 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	GOLGA6L3	A6NEY3	463 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	HSPA1L	P34931	641 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	NME9	Q86XW9	330 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	VSIG10	Q8N0Z9	540 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	SPATA31A3	Q5VYP0	1347 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	USP21	Q9UK80	565 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TULP4	Q9NRJ4	1543 aa		7.14	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	ATP7B	P35670	1465 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	NGEF	Q8N5V2	710 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	ANTXR1	Q9H6X2	564 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PCDHB15	Q9Y5E8	787 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PTPRU	Q92729	1446 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	GAS2L2	Q8NHY3	880 aa		7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	UPF2	Q9HAU5	1272 aa	Known RBP	7.13	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PDZRN3	Q9UPQ7	1066 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	EXOC5	O00471	708 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	RLBP1	P12271	317 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TRMT2A	Q8IZ69	625 aa	Known RBP	7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TNS3	Q68CZ2	1445 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783		E9PSI1	815 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TEF	Q10587	303 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	KIAA1210	Q9ULL0	1709 aa		7.12	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	MCM4	P33991	863 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	MFAP1	P55081	439 aa	Known RBP	7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PKNOX2	Q96KN3	472 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	AMOT	Q4VCS5	1084 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	RXRB	P28702	533 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	MTHFS	P49914	203 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PPL	O60437	1756 aa		7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	SOS2	Q07890	1332 aa	Predicted RBP	7.11	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TRAK2	O60296	914 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TBC1D32	Q96NH3	1257 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	MST1R	Q04912	1400 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783		A0A1W2PP64	1363 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	ANKRD24	Q8TF21	1146 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	BTG4	Q9NY30	223 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	USP6	P35125	1406 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	FLT4	P35916	1363 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	HSP90AA1	P07900	732 aa	Known RBP	7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	CHRNA2	Q15822	529 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	IP6K1	Q92551	441 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	ZMYND15	Q9H091	742 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	SIGLEC1	Q9BZZ2	1709 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PRR36	Q9H6K5	1346 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	FYB1	O15117	783 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	PDE3A	Q14432	1141 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	WWC1	Q8IX03	1113 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	TTC5	Q8N0Z6	440 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	CABLES1	Q8TDN4	633 aa		7.1	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	CDC42BPG	Q6DT37	1551 aa		7.09	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	INSR	P06213	1382 aa		7.09	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	QTRT2	Q9H974	415 aa	Known RBP	7.09	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	KIF24	Q5T7B8	1368 aa		7.09	□□□□□ -1.27
RAPGEF4-215	ENST00000540783	DDB1	Q16531	1140 aa		7.09	□□□□□ -1.28

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