RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-218	ENST00000540708	KIF24	Q5T7B8	1368 aa		32.45	■■■□□ 2.79
ARL6IP4-218	ENST00000540708	MSH6	P52701	1360 aa		32.44	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	AMPH	P49418	695 aa		32.44	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	RIPK4	P57078	832 aa		32.42	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	PPP4R2	Q9NY27	417 aa		32.42	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	TRIM35	Q9UPQ4	493 aa		32.41	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	KRT28	Q7Z3Y7	464 aa		32.39	■■■□□ 2.78
ARL6IP4-218	ENST00000540708	MYH16	Q9H6N6	1097 aa		32.38	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	NFE2L2	Q16236	605 aa		32.37	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	PHACTR3	Q96KR7	559 aa		32.37	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	XIRP1	Q702N8	1843 aa	Known RBP	32.37	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	RGPD1	P0DJD0	1748 aa		32.37	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.37	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	XPC	Q01831	940 aa	Predicted RBP	32.36	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	KCNH5	Q8NCM2	988 aa		32.36	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	IL16	Q14005	1332 aa		32.36	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.35	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	SULT6B1	Q6IMI4	303 aa		32.35	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	RTL1	A6NKG5	1358 aa		32.34	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	ARHGEF10	O15013	1369 aa		32.34	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	NFAT5	O94916	1531 aa		32.33	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	HOXC9	P31274	260 aa		32.33	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	PELP1	Q8IZL8	1130 aa	Known RBP	32.33	■■■□□ 2.77
ARL6IP4-218	ENST00000540708	AEBP1	Q8IUX7	1158 aa		32.3	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.29	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	SLIT3	O75094	1523 aa		32.29	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	LTN1	O94822	1766 aa		32.28	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	LMOD3	Q0VAK6	560 aa		32.27	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	LMOD2	Q6P5Q4	547 aa		32.27	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	NPHP3	Q7Z494	1330 aa		32.27	■■■□□ 2.76
ARL6IP4-218	ENST00000540708	USP19	O94966	1318 aa		32.26	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	IGSF1	Q8N6C5	1336 aa		32.26	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	PLIN1	O60240	522 aa		32.25	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	CALD1	Q05682	793 aa	Known RBP	32.25	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	IP6K1	Q92551	441 aa		32.25	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	EYA1	Q99502	592 aa		32.24	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	GC	P02774	474 aa		32.24	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	ALS2	Q96Q42	1657 aa		32.24	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.23	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	KDR	P35968	1356 aa		32.23	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	FANCI	Q9NVI1	1328 aa		32.23	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	DLG5	Q8TDM6	1919 aa		32.2	■■■□□ 2.75
ARL6IP4-218	ENST00000540708	CT47B1	P0C2W7	299 aa	Predicted RBP	32.19	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	TSR2	Q969E8	191 aa	Known RBP	32.19	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	ARHGEF25	Q86VW2	580 aa		32.17	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	EXOC6	Q8TAG9	804 aa		32.17	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	DDX17	Q92841	729 aa	Known RBP	32.17	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	BCAR3	O75815	825 aa		32.17	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	B4GALNT3	Q6L9W6	998 aa		32.16	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	BRINP3	Q76B58	766 aa		32.16	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	LTV1	Q96GA3	475 aa	Predicted RBP	32.16	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	PXDN	Q92626	1479 aa		32.16	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	SLAIN2	Q9P270	581 aa		32.15	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	TNS3	Q68CZ2	1445 aa		32.15	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	ZBTB7C	A1YPR0	619 aa		32.14	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	RARS	P54136	660 aa	Known RBP	32.14	■■■□□ 2.74
ARL6IP4-218	ENST00000540708	EXOSC9	Q06265	439 aa	Known RBP	32.13	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	IFT57	Q9NWB7	429 aa		32.13	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	GNAI1	P63096	354 aa		32.12	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	THUMPD2	Q9BTF0	503 aa	Known RBP	32.12	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	PLEKHG5	O94827	1062 aa		32.12	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	MED1	Q15648	1581 aa	Predicted RBP	32.11	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	CCDC136	Q96JN2	1154 aa		32.11	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	C20orf194	Q5TEA3	1177 aa		32.1	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	CRBN	Q96SW2	442 aa		32.1	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	LAS1L	Q9Y4W2	734 aa	Known RBP	32.09	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	SPATA31A3	Q5VYP0	1347 aa		32.09	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	GAS2L2	Q8NHY3	880 aa		32.09	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	ZNF853	P0CG23	659 aa		32.08	■■■□□ 2.73
ARL6IP4-218	ENST00000540708	FAM83G	A6ND36	823 aa		32.07	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	MTHFSD	Q2M296	383 aa	Known RBP	32.07	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	CFAP44	Q96MT7	982 aa		32.06	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	CANX	P27824	592 aa	Known RBP	32.04	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	DCTN1	Q14203	1278 aa		32.04	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	PDE3A	Q14432	1141 aa		32.03	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	NBPF6	Q5VWK0	638 aa		32.02	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	NBPF4	Q96M43	638 aa		32.02	■■■□□ 2.72
ARL6IP4-218	ENST00000540708	SOS2	Q07890	1332 aa	Predicted RBP	32.01	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	ZC3H6	P61129	1189 aa	Known RBP	32.01	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	RTF1	Q92541	710 aa	Known RBP	32.01	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	MBIP	Q9NS73	344 aa		32.01	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	USHBP1	Q8N6Y0	703 aa		32	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	ANKRD24	Q8TF21	1146 aa		32	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	FRAT1	Q92837	279 aa	Predicted RBP	31.99	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	HTATSF1	O43719	755 aa	Known RBP	31.99	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	MCM10	Q7L590	875 aa		31.99	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	ZNF428	Q96B54	188 aa		31.99	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	BCL2L13	Q9BXK5	485 aa		31.99	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	CRYBG1	Q9Y4K1	1723 aa		31.97	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	SMC4	Q9NTJ3	1288 aa		31.96	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	AXIN2	Q9Y2T1	843 aa		31.96	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	LRRC59	Q96AG4	307 aa	Known RBP	31.96	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	NCAPD2	Q15021	1401 aa		31.96	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	CABLES1	Q8TDN4	633 aa		31.95	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	RGPD2	P0DJD1	1756 aa		31.95	■■■□□ 2.71
ARL6IP4-218	ENST00000540708	ALDH1L2	Q3SY69	923 aa		31.94	■■■□□ 2.7
ARL6IP4-218	ENST00000540708	ABCC6	O95255	1503 aa		31.94	■■■□□ 2.7
ARL6IP4-218	ENST00000540708	GNAT3	A8MTJ3	354 aa		31.94	■■■□□ 2.7
ARL6IP4-218	ENST00000540708	SSH1	Q8WYL5	1049 aa		31.94	■■■□□ 2.7
ARL6IP4-218	ENST00000540708	CRB1	P82279	1406 aa		31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms