RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PROSER2Q86WR7 435 aaPredicted RBP26.41■■□□□ 1.82
DDX55-205ENST00000538744 TSR2Q969E8 191 aaKnown RBP26.41■■□□□ 1.82
DDX55-205ENST00000538744 ESCO1Q5FWF5 840 aa26.4■■□□□ 1.82
DDX55-205ENST00000538744 ABTB2Q8N961 1025 aa26.4■■□□□ 1.82
DDX55-205ENST00000538744 PAK3O75914 559 aaPredicted RBP26.39■■□□□ 1.82
DDX55-205ENST00000538744 CANXP27824 592 aaKnown RBP26.39■■□□□ 1.82
DDX55-205ENST00000538744 CALD1Q05682 793 aaKnown RBP26.39■■□□□ 1.82
DDX55-205ENST00000538744 PDE3AQ14432 1141 aa26.39■■□□□ 1.82
DDX55-205ENST00000538744 KIF24Q5T7B8 1368 aa26.39■■□□□ 1.82
DDX55-205ENST00000538744 LMOD3Q0VAK6 560 aa26.39■■□□□ 1.81
DDX55-205ENST00000538744 ARHGEF10O15013 1369 aa26.37■■□□□ 1.81
DDX55-205ENST00000538744 SULT6B1Q6IMI4 303 aa26.37■■□□□ 1.81
DDX55-205ENST00000538744 AMPHP49418 695 aa26.36■■□□□ 1.81
DDX55-205ENST00000538744 EXOSC9Q06265 439 aaKnown RBP26.36■■□□□ 1.81
DDX55-205ENST00000538744 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
DDX55-205ENST00000538744 PSME1Q06323 249 aa26.35■■□□□ 1.81
DDX55-205ENST00000538744 NUTM2GQ5VZR2 741 aa26.35■■□□□ 1.81
DDX55-205ENST00000538744 STRCP1A6NGW2 1772 aa26.34■■□□□ 1.81
DDX55-205ENST00000538744 AEBP1Q8IUX7 1158 aa26.34■■□□□ 1.81
DDX55-205ENST00000538744 LTN1O94822 1766 aa26.33■■□□□ 1.81
DDX55-205ENST00000538744 FRAT1Q92837 279 aaPredicted RBP26.32■■□□□ 1.8
DDX55-205ENST00000538744 C19orf44Q9H6X5 657 aa26.31■■□□□ 1.8
DDX55-205ENST00000538744 RTL1A6NKG5 1358 aa26.3■■□□□ 1.8
DDX55-205ENST00000538744 GNAI1P63096 354 aa26.3■■□□□ 1.8
DDX55-205ENST00000538744 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
DDX55-205ENST00000538744 NCOA3Q9Y6Q9 1424 aa26.29■■□□□ 1.8
DDX55-205ENST00000538744 NFAT5O94916 1531 aa26.29■■□□□ 1.8
DDX55-205ENST00000538744 ORAI2Q96SN7 254 aa26.29■■□□□ 1.8
DDX55-205ENST00000538744 C1orf167Q5SNV9 1468 aa26.28■■□□□ 1.8
DDX55-205ENST00000538744 KDRP35968 1356 aa26.28■■□□□ 1.8
DDX55-205ENST00000538744 HOXC9P31274 260 aa26.28■■□□□ 1.8
DDX55-205ENST00000538744 BCL2L13Q9BXK5 485 aa26.28■■□□□ 1.8
DDX55-205ENST00000538744 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
DDX55-205ENST00000538744 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
DDX55-205ENST00000538744 RBM19Q9Y4C8 960 aaKnown RBP26.28■■□□□ 1.8
DDX55-205ENST00000538744 IGSF1Q8N6C5 1336 aa26.27■■□□□ 1.8
DDX55-205ENST00000538744 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
DDX55-205ENST00000538744 LAS1LQ9Y4W2 734 aaKnown RBP26.27■■□□□ 1.8
DDX55-205ENST00000538744 DCCP43146 1447 aa26.27■■□□□ 1.8
DDX55-205ENST00000538744 HSPA2P54652 639 aa26.26■■□□□ 1.79
DDX55-205ENST00000538744 TMEM94Q12767 1356 aa26.26■■□□□ 1.79
DDX55-205ENST00000538744 ZNF853P0CG23 659 aa26.25■■□□□ 1.79
DDX55-205ENST00000538744 SMC4Q9NTJ3 1288 aa26.25■■□□□ 1.79
DDX55-205ENST00000538744 PHRF1Q9P1Y6 1649 aaKnown RBP26.25■■□□□ 1.79
DDX55-205ENST00000538744 KCNH5Q8NCM2 988 aa26.24■■□□□ 1.79
DDX55-205ENST00000538744 EYA1Q99502 592 aa26.24■■□□□ 1.79
DDX55-205ENST00000538744 FOXO3O43524 673 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 MS4A1P11836 297 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 ZKSCAN2Q63HK3 967 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 CENPQQ7L2Z9 268 aaPredicted RBP26.23■■□□□ 1.79
DDX55-205ENST00000538744 ZNF428Q96B54 188 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 CFAP44Q96MT7 982 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 COG6Q9Y2V7 657 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 KDM2BQ8NHM5 1336 aa26.23■■□□□ 1.79
DDX55-205ENST00000538744 SSH1Q8WYL5 1049 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 LMTK3Q96Q04 1460 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 SLIT3O75094 1523 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 ATF3P18847 181 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 AAMPQ13685 434 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 ALDH1L2Q3SY69 923 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 MST1RQ04912 1400 aa26.22■■□□□ 1.79
DDX55-205ENST00000538744 KDM4FA0A1W2PPD8 638 aa26.21■■□□□ 1.79
DDX55-205ENST00000538744 FAM83GA6ND36 823 aa26.21■■□□□ 1.79
DDX55-205ENST00000538744 MBIPQ9NS73 344 aa26.2■■□□□ 1.79
DDX55-205ENST00000538744 STRCQ7RTU9 1775 aa26.2■■□□□ 1.78
DDX55-205ENST00000538744 KIF16BQ96L93 1317 aa26.19■■□□□ 1.78
DDX55-205ENST00000538744 IP6K1Q92551 441 aa26.19■■□□□ 1.78
DDX55-205ENST00000538744 RLBP1P12271 317 aa26.18■■□□□ 1.78
DDX55-205ENST00000538744 DCTN1Q14203 1278 aa26.18■■□□□ 1.78
DDX55-205ENST00000538744 KRT28Q7Z3Y7 464 aa26.18■■□□□ 1.78
DDX55-205ENST00000538744 CLUAP1Q96AJ1 413 aa26.18■■□□□ 1.78
DDX55-205ENST00000538744 XPCQ01831 940 aaPredicted RBP26.17■■□□□ 1.78
DDX55-205ENST00000538744 TNNQ9UQP3 1299 aa26.17■■□□□ 1.78
DDX55-205ENST00000538744 TCERG1O14776 1098 aaKnown RBP26.17■■□□□ 1.78
DDX55-205ENST00000538744 DZIP1LQ8IYY4 767 aaKnown RBP26.17■■□□□ 1.78
DDX55-205ENST00000538744 ALS2Q96Q42 1657 aa26.16■■□□□ 1.78
DDX55-205ENST00000538744 FTSJ3Q8IY81 847 aaKnown RBP26.16■■□□□ 1.78
DDX55-205ENST00000538744 GAS2L2Q8NHY3 880 aa26.15■■□□□ 1.78
DDX55-205ENST00000538744 XIRP1Q702N8 1843 aaKnown RBP26.15■■□□□ 1.78
DDX55-205ENST00000538744 BRPF1P55201 1214 aaPredicted RBP26.14■■□□□ 1.78
DDX55-205ENST00000538744 MTHFSDQ2M296 383 aaKnown RBP26.14■■□□□ 1.78
DDX55-205ENST00000538744 USP19O94966 1318 aa26.14■■□□□ 1.77
DDX55-205ENST00000538744 IPO8O15397 1037 aaKnown RBP26.14■■□□□ 1.77
DDX55-205ENST00000538744 VAMP4O75379 141 aa26.14■■□□□ 1.77
DDX55-205ENST00000538744 ATF7IPQ6VMQ6 1270 aa26.14■■□□□ 1.77
DDX55-205ENST00000538744 CADPS2Q86UW7 1296 aa26.14■■□□□ 1.77
DDX55-205ENST00000538744 LTV1Q96GA3 475 aaPredicted RBP26.14■■□□□ 1.77
DDX55-205ENST00000538744 MVPQ14764 893 aaKnown RBP26.13■■□□□ 1.77
DDX55-205ENST00000538744 NOB1Q9ULX3 412 aaKnown RBP26.13■■□□□ 1.77
DDX55-205ENST00000538744 MSH6P52701 1360 aa26.13■■□□□ 1.77
DDX55-205ENST00000538744 TRIM27P14373 513 aa26.12■■□□□ 1.77
DDX55-205ENST00000538744 MCM10Q7L590 875 aa26.12■■□□□ 1.77
DDX55-205ENST00000538744 GCP02774 474 aa26.11■■□□□ 1.77
DDX55-205ENST00000538744 LMOD2Q6P5Q4 547 aa26.11■■□□□ 1.77
DDX55-205ENST00000538744 TWISTNBQ3B726 338 aaPredicted RBP26.11■■□□□ 1.77
DDX55-205ENST00000538744 RTF1Q92541 710 aaKnown RBP26.11■■□□□ 1.77
DDX55-205ENST00000538744 CRB1P82279 1406 aa26.1■■□□□ 1.77
DDX55-205ENST00000538744 CHL1O00533 1208 aa26.1■■□□□ 1.77
DDX55-205ENST00000538744 TSPYL6Q8N831 410 aa26.1■■□□□ 1.77
DDX55-205ENST00000538744 LRRC37A3O60309 1634 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms