RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.68□□□□□ -1.34
SNHG1-208ENST00000538266 MTUS2Q5JR59 1369 aa6.68□□□□□ -1.34
SNHG1-208ENST00000538266 TIAM1Q13009 1591 aa6.67□□□□□ -1.34
SNHG1-208ENST00000538266 DIP2BQ9P265 1576 aa6.67□□□□□ -1.34
SNHG1-208ENST00000538266 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
SNHG1-208ENST00000538266 LYPD8Q6UX82 237 aa6.67□□□□□ -1.34
SNHG1-208ENST00000538266 KIF14Q15058 1648 aa6.67□□□□□ -1.34
SNHG1-208ENST00000538266 ABCC10Q5T3U5 1492 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 PER1O15534 1290 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-208ENST00000538266 CCDC24Q8N4L8 307 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 BANK1Q8NDB2 785 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-208ENST00000538266 MAP3K1Q13233 1512 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 EHBP1L1Q8N3D4 1523 aa6.66□□□□□ -1.34
SNHG1-208ENST00000538266 FAM69CQ0P6D2 419 aa6.65□□□□□ -1.34
SNHG1-208ENST00000538266 KIF13AQ9H1H9 1805 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 PTPRNQ16849 979 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 NUDT12Q9BQG2 462 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 EVA1BQ9NVM1 165 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 FCF1Q9Y324 198 aaKnown RBP6.64□□□□□ -1.35
SNHG1-208ENST00000538266 GLI2P10070 1586 aa6.64□□□□□ -1.35
SNHG1-208ENST00000538266 USP17L8P0C7I0 530 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 CTHP32929 405 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 MAGI3Q5TCQ9 1506 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 LRRC9Q6ZRR7 1453 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 SUPT6HQ7KZ85 1726 aaKnown RBP6.63□□□□□ -1.35
SNHG1-208ENST00000538266 ABCA9Q8IUA7 1624 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 ANKLE1Q8NAG6 615 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 SNRKQ9NRH2 765 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 MAP3K4Q9Y6R4 1608 aa6.63□□□□□ -1.35
SNHG1-208ENST00000538266 TTC37Q6PGP7 1564 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNHG1-208ENST00000538266 TEX14Q8IWB6 1497 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 CD109Q6YHK3 1445 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 CCNYL3P0C7X3 344 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 KCNH2Q12809 1159 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 TSPOAP1O95153 1857 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 MYO5CQ9NQX4 1742 aa6.62□□□□□ -1.35
SNHG1-208ENST00000538266 CCNB3Q8WWL7 1395 aa6.61□□□□□ -1.35
SNHG1-208ENST00000538266 A0A0G2JS52 829 aa6.61□□□□□ -1.35
SNHG1-208ENST00000538266 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-208ENST00000538266 FLIIQ13045 1269 aa6.61□□□□□ -1.35
SNHG1-208ENST00000538266 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-208ENST00000538266 ITSN2Q9NZM3 1697 aa6.61□□□□□ -1.35
SNHG1-208ENST00000538266 CFAP74Q9C0B2 1584 aa6.61□□□□□ -1.35
SNHG1-208ENST00000538266 NR6A1Q15406 480 aa6.6□□□□□ -1.35
SNHG1-208ENST00000538266 KANK4Q5T7N3 995 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-208ENST00000538266 ARHGAP5Q13017 1502 aa6.6□□□□□ -1.35
SNHG1-208ENST00000538266 NCOA2Q15596 1464 aa6.6□□□□□ -1.35
SNHG1-208ENST00000538266 PREX2Q70Z35 1606 aa6.59□□□□□ -1.35
SNHG1-208ENST00000538266 F12P00748 615 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-208ENST00000538266 PLA2G2CQ5R387 149 aa6.59□□□□□ -1.35
SNHG1-208ENST00000538266 EPS8L1Q8TE68 723 aa6.59□□□□□ -1.35
SNHG1-208ENST00000538266 HMX1Q9NP08 348 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-208ENST00000538266 MAP10Q9P2G4 905 aa6.59□□□□□ -1.35
SNHG1-208ENST00000538266 ARAP3Q8WWN8 1544 aa6.59□□□□□ -1.35
SNHG1-208ENST00000538266 FANCAO15360 1455 aa6.59□□□□□ -1.36
SNHG1-208ENST00000538266 CDC42BPAQ5VT25 1732 aa6.59□□□□□ -1.36
SNHG1-208ENST00000538266 CD2BP2O95400 341 aaKnown RBP6.58□□□□□ -1.36
SNHG1-208ENST00000538266 SLC19A1P41440 591 aa6.58□□□□□ -1.36
SNHG1-208ENST00000538266 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
SNHG1-208ENST00000538266 UNC93B1Q9H1C4 597 aa6.58□□□□□ -1.36
SNHG1-208ENST00000538266 NEO1Q92859 1461 aa6.58□□□□□ -1.36
SNHG1-208ENST00000538266 PLCH2O75038 1416 aa6.58□□□□□ -1.36
SNHG1-208ENST00000538266 GPATCH8Q9UKJ3 1502 aaKnown RBP6.57□□□□□ -1.36
SNHG1-208ENST00000538266 APBB1O00213 710 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 MCM6Q14566 821 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 EFCAB2Q5VUJ9 269 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 LIAT1Q6ZQX7 453 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 PPARGC1BQ86YN6 1023 aaKnown RBP6.57□□□□□ -1.36
SNHG1-208ENST00000538266 TRIM34Q9BYJ4 488 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 CFDP1Q9UEE9 299 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-208ENST00000538266 PPRC1Q5VV67 1664 aaKnown RBP6.57□□□□□ -1.36
SNHG1-208ENST00000538266 MYOM3Q5VTT5 1437 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 PHLDB1Q86UU1 1377 aa6.57□□□□□ -1.36
SNHG1-208ENST00000538266 CDC42BPBQ9Y5S2 1711 aa6.56□□□□□ -1.36
SNHG1-208ENST00000538266 RPIAP49247 311 aa6.56□□□□□ -1.36
SNHG1-208ENST00000538266 ARMC2Q8NEN0 867 aa6.56□□□□□ -1.36
SNHG1-208ENST00000538266 BAP1Q92560 729 aa6.56□□□□□ -1.36
SNHG1-208ENST00000538266 GJD4Q96KN9 370 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-208ENST00000538266 PRKD2Q9BZL6 878 aa6.56□□□□□ -1.36
SNHG1-208ENST00000538266 ZNF777Q9ULD5 760 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-208ENST00000538266 ADGRL1O94910 1474 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 PLEKHH2Q8IVE3 1493 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 KDM6BO15054 1643 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 SOCS7O14512 581 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 FKBPLQ9UIM3 349 aa6.55□□□□□ -1.36
SNHG1-208ENST00000538266 FGD6Q6ZV73 1430 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 AKNAQ7Z591 1439 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 MIA2Q96PC5 1412 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 RAD21O60216 631 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 TRIM32Q13049 653 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 EMID1Q96A84 441 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-208ENST00000538266 ABCC1P33527 1531 aa6.54□□□□□ -1.36
SNHG1-208ENST00000538266 CAMSAP2Q08AD1 1489 aa6.53□□□□□ -1.36
SNHG1-208ENST00000538266 SAMD9LQ8IVG5 1584 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms