RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 COL18A1P39060 1754 aa9.02□□□□□ -0.97
IFT88-207ENST00000537103 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
IFT88-207ENST00000537103 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
IFT88-207ENST00000537103 CDK12Q9NYV4 1490 aaPredicted RBP9.01□□□□□ -0.97
IFT88-207ENST00000537103 SLIT2O94813 1529 aa9.01□□□□□ -0.97
IFT88-207ENST00000537103 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
IFT88-207ENST00000537103 SLC12A5Q9H2X9 1139 aa9.01□□□□□ -0.97
IFT88-207ENST00000537103 FOXO3O43524 673 aa9.01□□□□□ -0.97
IFT88-207ENST00000537103 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
IFT88-207ENST00000537103 PIP4K2BP78356 416 aa9□□□□□ -0.97
IFT88-207ENST00000537103 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
IFT88-207ENST00000537103 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
IFT88-207ENST00000537103 PMFBP1Q8TBY8 1022 aa9□□□□□ -0.97
IFT88-207ENST00000537103 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
IFT88-207ENST00000537103 LRP6O75581 1613 aa8.99□□□□□ -0.97
IFT88-207ENST00000537103 NCAPD2Q15021 1401 aa8.99□□□□□ -0.97
IFT88-207ENST00000537103 COG3Q96JB2 828 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 CARD14Q9BXL6 1004 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 PANK3Q9H999 370 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 MYT1Q01538 1121 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
IFT88-207ENST00000537103 FNBP4Q8N3X1 1017 aaPredicted RBP8.98□□□□□ -0.97
IFT88-207ENST00000537103 LTN1O94822 1766 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 FYB1O15117 783 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 WNK3Q9BYP7 1800 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 RALBP1Q15311 655 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 ATRNO75882 1429 aa8.97□□□□□ -0.97
IFT88-207ENST00000537103 C1orf115Q9H7X2 142 aa8.96□□□□□ -0.98
IFT88-207ENST00000537103 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
IFT88-207ENST00000537103 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
IFT88-207ENST00000537103 ILDR1Q86SU0 546 aaPredicted RBP8.95□□□□□ -0.98
IFT88-207ENST00000537103 ARHGEF25Q86VW2 580 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 ZMYND15Q9H091 742 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 FLT4P35916 1363 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 GCP02774 474 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 NLRP6P59044 892 aa8.95□□□□□ -0.98
IFT88-207ENST00000537103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
IFT88-207ENST00000537103 THRAP3Q9Y2W1 955 aaKnown RBP8.95□□□□□ -0.98
IFT88-207ENST00000537103 RGPD1P0DJD0 1748 aa8.94□□□□□ -0.98
IFT88-207ENST00000537103 COL5A2P05997 1499 aaPredicted RBP8.94□□□□□ -0.98
IFT88-207ENST00000537103 THSD7AQ9UPZ6 1657 aa8.93□□□□□ -0.98
IFT88-207ENST00000537103 IP6K1Q92551 441 aa8.93□□□□□ -0.98
IFT88-207ENST00000537103 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
IFT88-207ENST00000537103 PEAK1Q9H792 1746 aa8.93□□□□□ -0.98
IFT88-207ENST00000537103 PARP4Q9UKK3 1724 aaKnown RBP8.93□□□□□ -0.98
IFT88-207ENST00000537103 PAK3O75914 559 aaPredicted RBP8.92□□□□□ -0.98
IFT88-207ENST00000537103 VPS72Q15906 364 aa8.92□□□□□ -0.98
IFT88-207ENST00000537103 NME9Q86XW9 330 aa8.92□□□□□ -0.98
IFT88-207ENST00000537103 COL3A1P02461 1466 aaPredicted RBP8.92□□□□□ -0.98
IFT88-207ENST00000537103 BCL9LQ86UU0 1499 aa8.92□□□□□ -0.98
IFT88-207ENST00000537103 NECTIN2Q92692 538 aa8.92□□□□□ -0.98
IFT88-207ENST00000537103 BCL9O00512 1426 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 CRB1P82279 1406 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 NKX1-1Q15270 411 aaPredicted RBP8.91□□□□□ -0.98
IFT88-207ENST00000537103 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 EIF5BO60841 1220 aaKnown RBP8.91□□□□□ -0.98
IFT88-207ENST00000537103 MORC1Q86VD1 984 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
IFT88-207ENST00000537103 DDX17Q92841 729 aaKnown RBP8.91□□□□□ -0.98
IFT88-207ENST00000537103 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
IFT88-207ENST00000537103 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.99
IFT88-207ENST00000537103 TRPC5Q9UL62 973 aaPredicted RBP8.9□□□□□ -0.99
IFT88-207ENST00000537103 DISP2A7MBM2 1401 aa8.9□□□□□ -0.99
IFT88-207ENST00000537103 WDR17Q8IZU2 1322 aa8.9□□□□□ -0.99
IFT88-207ENST00000537103 PKD1L3Q7Z443 1732 aa8.89□□□□□ -0.99
IFT88-207ENST00000537103 MAP2P11137 1827 aaKnown RBP8.89□□□□□ -0.99
IFT88-207ENST00000537103 ZBTB7CA1YPR0 619 aa8.89□□□□□ -0.99
IFT88-207ENST00000537103 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.89□□□□□ -0.99
IFT88-207ENST00000537103 MAP3K19Q56UN5 1328 aa8.89□□□□□ -0.99
IFT88-207ENST00000537103 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
IFT88-207ENST00000537103 HOXC9P31274 260 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 XPCQ01831 940 aaPredicted RBP8.88□□□□□ -0.99
IFT88-207ENST00000537103 MEX3CQ5U5Q3 659 aaKnown RBP8.88□□□□□ -0.99
IFT88-207ENST00000537103 CARD10Q9BWT7 1032 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 PRDM11Q9NQV5 511 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 GLI3P10071 1580 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 HS6ST3Q8IZP7 471 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 SPATA31A5Q5VU36 1347 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 SPATA31A7Q8IWB4 1347 aa8.88□□□□□ -0.99
IFT88-207ENST00000537103 CFAP53Q96M91 514 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 GGNBP2Q9H3C7 697 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 ERBB3P21860 1342 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 KDRP35968 1356 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 FAM83GA6ND36 823 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 AFF2P51816 1311 aa8.87□□□□□ -0.99
IFT88-207ENST00000537103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.997e-7■■■■□ 24
IFT88-207ENST00000537103 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
IFT88-207ENST00000537103 RBM6P78332 1123 aaKnown RBP8.86□□□□□ -0.99
IFT88-207ENST00000537103 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
IFT88-207ENST00000537103 PNNQ9H307 717 aaKnown RBP8.86□□□□□ -0.99
IFT88-207ENST00000537103 SPATA31A1Q5TZJ5 1347 aa8.86□□□□□ -0.99
IFT88-207ENST00000537103 OVOS2A0A0G2JMS6 1433 aa8.86□□□□□ -0.99
IFT88-207ENST00000537103 LRRC37A3O60309 1634 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms