RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 ZSCAN23Q3MJ62 389 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.92■□□□□ 0.46
CDH20-202ENST00000536675 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 CHMP4BQ9H444 224 aaKnown RBP17.92■□□□□ 0.46
CDH20-202ENST00000536675 VAMP4O75379 141 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
CDH20-202ENST00000536675 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
CDH20-202ENST00000536675 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
CDH20-202ENST00000536675 RABEP1Q15276 862 aa17.91■□□□□ 0.46
CDH20-202ENST00000536675 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
CDH20-202ENST00000536675 CYP2E1P05181 493 aaPredicted RBP17.91■□□□□ 0.46
CDH20-202ENST00000536675 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
CDH20-202ENST00000536675 RBSNQ9H1K0 784 aa17.9■□□□□ 0.46
CDH20-202ENST00000536675 PNPLA6Q8IY17 1366 aa17.9■□□□□ 0.46
CDH20-202ENST00000536675 NUCB2P80303 420 aa17.9■□□□□ 0.46
CDH20-202ENST00000536675 TSPYL6Q8N831 410 aa17.9■□□□□ 0.46
CDH20-202ENST00000536675 PKP1Q13835 747 aa17.89■□□□□ 0.46
CDH20-202ENST00000536675 FCHSD2O94868 740 aa17.89■□□□□ 0.45
CDH20-202ENST00000536675 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
CDH20-202ENST00000536675 ABCC4O15439 1325 aa17.89■□□□□ 0.45
CDH20-202ENST00000536675 TERF1P54274 439 aa17.89■□□□□ 0.45
CDH20-202ENST00000536675 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
CDH20-202ENST00000536675 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
CDH20-202ENST00000536675 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
CDH20-202ENST00000536675 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
CDH20-202ENST00000536675 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.88■□□□□ 0.45
CDH20-202ENST00000536675 KNDC1Q76NI1 1749 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 RBM10P98175 930 aaKnown RBP17.87■□□□□ 0.45
CDH20-202ENST00000536675 PDLIM2Q96JY6 352 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
CDH20-202ENST00000536675 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 ELL2O00472 640 aaPredicted RBP17.87■□□□□ 0.45
CDH20-202ENST00000536675 PRIM1P49642 420 aaKnown RBP17.87■□□□□ 0.45
CDH20-202ENST00000536675 CDC42BPGQ6DT37 1551 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 GGT6Q6P531 493 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 STK26Q9P289 416 aa17.87■□□□□ 0.45
CDH20-202ENST00000536675 R3HCC1Q9Y3T6 440 aaKnown RBP17.87■□□□□ 0.45
CDH20-202ENST00000536675 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
CDH20-202ENST00000536675 SIGLEC1Q9BZZ2 1709 aa17.85■□□□□ 0.45
CDH20-202ENST00000536675 KIF20BQ96Q89 1820 aa17.85■□□□□ 0.45
CDH20-202ENST00000536675 ZNF500O60304 480 aaPredicted RBP17.85■□□□□ 0.45
CDH20-202ENST00000536675 TTC22Q5TAA0 569 aa17.85■□□□□ 0.45
CDH20-202ENST00000536675 GPT2Q8TD30 523 aa17.85■□□□□ 0.45
CDH20-202ENST00000536675 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
CDH20-202ENST00000536675 PRPF40AO75400 957 aaKnown RBP17.85■□□□□ 0.45
CDH20-202ENST00000536675 RBM27Q9P2N5 1060 aaKnown RBP17.85■□□□□ 0.45
CDH20-202ENST00000536675 NFE2L2Q16236 605 aa17.84■□□□□ 0.45
CDH20-202ENST00000536675 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
CDH20-202ENST00000536675 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
CDH20-202ENST00000536675 PIK3C2BO00750 1634 aa17.84■□□□□ 0.45
CDH20-202ENST00000536675 HECW2Q9P2P5 1572 aa17.84■□□□□ 0.45
CDH20-202ENST00000536675 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CDH20-202ENST00000536675 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.45
CDH20-202ENST00000536675 ZGPATQ8N5A5 531 aaKnown RBP17.83■□□□□ 0.45
CDH20-202ENST00000536675 CWC22Q9HCG8 908 aaKnown RBP17.83■□□□□ 0.45
CDH20-202ENST00000536675 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.44
CDH20-202ENST00000536675 DCTPP1Q9H773 170 aa17.83■□□□□ 0.44
CDH20-202ENST00000536675 MBIPQ9NS73 344 aa17.83■□□□□ 0.44
CDH20-202ENST00000536675 FRMPD1Q5SYB0 1578 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 ZFYVE9O95405 1425 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 FBLN1P23142 703 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 ABCC3O15438 1527 aa17.82■□□□□ 0.44
CDH20-202ENST00000536675 HMOX1P09601 288 aa17.81■□□□□ 0.44
CDH20-202ENST00000536675 GNAI1P63096 354 aa17.81■□□□□ 0.44
CDH20-202ENST00000536675 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
CDH20-202ENST00000536675 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
CDH20-202ENST00000536675 INTS3Q68E01 1043 aaKnown RBP17.81■□□□□ 0.44
CDH20-202ENST00000536675 FAM13BQ9NYF5 915 aa17.81■□□□□ 0.44
CDH20-202ENST00000536675 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
CDH20-202ENST00000536675 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
CDH20-202ENST00000536675 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
CDH20-202ENST00000536675 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
CDH20-202ENST00000536675 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 ZKSCAN5Q9Y2L8 839 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 PTPRMP28827 1452 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
CDH20-202ENST00000536675 TMEM63CQ9P1W3 806 aa17.8■□□□□ 0.44
CDH20-202ENST00000536675 HDGFL2Q7Z4V5 671 aaPredicted RBP17.79■□□□□ 0.44
CDH20-202ENST00000536675 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
CDH20-202ENST00000536675 ST18O60284 1047 aa17.79■□□□□ 0.44
CDH20-202ENST00000536675 LRSAM1Q6UWE0 723 aa17.79■□□□□ 0.44
CDH20-202ENST00000536675 UQCRHLA0A096LP55 91 aa17.78■□□□□ 0.44
CDH20-202ENST00000536675 UQCRHP07919 91 aa17.78■□□□□ 0.44
CDH20-202ENST00000536675 SDSP20132 328 aa17.78■□□□□ 0.44
CDH20-202ENST00000536675 NSFL1CQ9UNZ2 370 aaKnown RBP17.78■□□□□ 0.44
CDH20-202ENST00000536675 YEATS2Q9ULM3 1422 aa17.78■□□□□ 0.44
CDH20-202ENST00000536675 PRAM1Q96QH2 718 aa17.78■□□□□ 0.44
CDH20-202ENST00000536675 SYCE3A1L190 88 aa17.77■□□□□ 0.44
CDH20-202ENST00000536675 MAP7D2Q96T17 732 aa17.77■□□□□ 0.44
CDH20-202ENST00000536675 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.44
CDH20-202ENST00000536675 MYO5BQ9ULV0 1848 aa17.76■□□□□ 0.43
CDH20-202ENST00000536675 CABP1Q9NZU7 370 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms