RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
LGR5-202ENST00000536515 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
LGR5-202ENST00000536515 NRXN3Q9Y4C0 1643 aa16.5■□□□□ 0.23
LGR5-202ENST00000536515 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
LGR5-202ENST00000536515 NUCB1Q02818 461 aa16.49■□□□□ 0.23
LGR5-202ENST00000536515 ATP7BP35670 1465 aa16.48■□□□□ 0.23
LGR5-202ENST00000536515 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
LGR5-202ENST00000536515 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
LGR5-202ENST00000536515 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
LGR5-202ENST00000536515 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
LGR5-202ENST00000536515 NME9Q86XW9 330 aa16.48■□□□□ 0.23
LGR5-202ENST00000536515 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
LGR5-202ENST00000536515 VAMP4O75379 141 aa16.47■□□□□ 0.23
LGR5-202ENST00000536515 EID1Q9Y6B2 187 aa16.47■□□□□ 0.23
LGR5-202ENST00000536515 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
LGR5-202ENST00000536515 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
LGR5-202ENST00000536515 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
LGR5-202ENST00000536515 LTKP29376 864 aa16.46■□□□□ 0.23
LGR5-202ENST00000536515 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
LGR5-202ENST00000536515 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
LGR5-202ENST00000536515 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
LGR5-202ENST00000536515 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
LGR5-202ENST00000536515 DIP2AQ14689 1571 aa16.46■□□□□ 0.22
LGR5-202ENST00000536515 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
LGR5-202ENST00000536515 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
LGR5-202ENST00000536515 IL13P35225 146 aa16.45■□□□□ 0.22
LGR5-202ENST00000536515 TXNDC2Q86VQ3 553 aa16.45■□□□□ 0.22
LGR5-202ENST00000536515 GNAI1P63096 354 aa16.44■□□□□ 0.22
LGR5-202ENST00000536515 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
LGR5-202ENST00000536515 MBIPQ9NS73 344 aa16.44■□□□□ 0.22
LGR5-202ENST00000536515 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
LGR5-202ENST00000536515 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
LGR5-202ENST00000536515 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
LGR5-202ENST00000536515 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
LGR5-202ENST00000536515 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
LGR5-202ENST00000536515 EDC4Q6P2E9 1401 aaKnown RBP16.43■□□□□ 0.22
LGR5-202ENST00000536515 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
LGR5-202ENST00000536515 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
LGR5-202ENST00000536515 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
LGR5-202ENST00000536515 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
LGR5-202ENST00000536515 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
LGR5-202ENST00000536515 MCM4P33991 863 aa16.42■□□□□ 0.22
LGR5-202ENST00000536515 ARHGAP45Q92619 1136 aa16.42■□□□□ 0.22
LGR5-202ENST00000536515 ZNF853P0CG23 659 aa16.42■□□□□ 0.22
LGR5-202ENST00000536515 PTCH1Q13635 1447 aa16.41■□□□□ 0.22
LGR5-202ENST00000536515 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
LGR5-202ENST00000536515 METP08581 1390 aa16.41■□□□□ 0.22
LGR5-202ENST00000536515 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
LGR5-202ENST00000536515 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
LGR5-202ENST00000536515 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
LGR5-202ENST00000536515 COG3Q96JB2 828 aa16.41■□□□□ 0.22
LGR5-202ENST00000536515 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
LGR5-202ENST00000536515 CDK12Q9NYV4 1490 aaPredicted RBP16.4■□□□□ 0.22
LGR5-202ENST00000536515 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
LGR5-202ENST00000536515 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
LGR5-202ENST00000536515 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
LGR5-202ENST00000536515 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
LGR5-202ENST00000536515 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
LGR5-202ENST00000536515 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
LGR5-202ENST00000536515 STRCQ7RTU9 1775 aa16.4■□□□□ 0.22
LGR5-202ENST00000536515 NPHP4O75161 1426 aaPredicted RBP16.39■□□□□ 0.21
LGR5-202ENST00000536515 ABCC4O15439 1325 aa16.39■□□□□ 0.21
LGR5-202ENST00000536515 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
LGR5-202ENST00000536515 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
LGR5-202ENST00000536515 ARXQ96QS3 562 aa16.39■□□□□ 0.21
LGR5-202ENST00000536515 CPS1P31327 1500 aa16.38■□□□□ 0.21
LGR5-202ENST00000536515 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
LGR5-202ENST00000536515 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
LGR5-202ENST00000536515 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
LGR5-202ENST00000536515 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
LGR5-202ENST00000536515 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
LGR5-202ENST00000536515 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
LGR5-202ENST00000536515 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
LGR5-202ENST00000536515 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
LGR5-202ENST00000536515 HSPA2P54652 639 aa16.36■□□□□ 0.21
LGR5-202ENST00000536515 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
LGR5-202ENST00000536515 TBX22Q9Y458 520 aa16.35■□□□□ 0.21
LGR5-202ENST00000536515 SNX21Q969T3 373 aa16.35■□□□□ 0.21
LGR5-202ENST00000536515 TBC1D9Q6ZT07 1266 aa16.34■□□□□ 0.21
LGR5-202ENST00000536515 TRAK2O60296 914 aa16.34■□□□□ 0.21
LGR5-202ENST00000536515 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
LGR5-202ENST00000536515 NCOA3Q9Y6Q9 1424 aa16.34■□□□□ 0.21
LGR5-202ENST00000536515 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.21
LGR5-202ENST00000536515 KIF2CQ99661 725 aa16.33■□□□□ 0.21
LGR5-202ENST00000536515 PRR36Q9H6K5 1346 aa16.33■□□□□ 0.2
LGR5-202ENST00000536515 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
LGR5-202ENST00000536515 TECPR2O15040 1411 aa16.33■□□□□ 0.2
LGR5-202ENST00000536515 DDIT3P35638 169 aa16.32■□□□□ 0.2
LGR5-202ENST00000536515 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
LGR5-202ENST00000536515 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
LGR5-202ENST00000536515 FAM43AQ8N2R8 423 aa16.32■□□□□ 0.2
LGR5-202ENST00000536515 CHD2O14647 1828 aaKnown RBP16.32■□□□□ 0.2
LGR5-202ENST00000536515 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
LGR5-202ENST00000536515 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
LGR5-202ENST00000536515 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
LGR5-202ENST00000536515 NWD1Q149M9 1564 aa16.31■□□□□ 0.2
LGR5-202ENST00000536515 CD2BP2O95400 341 aaKnown RBP16.31■□□□□ 0.2
LGR5-202ENST00000536515 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
LGR5-202ENST00000536515 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
LGR5-202ENST00000536515 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms