RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
CHMP1A-202ENST00000535997 COG3Q96JB2 828 aa20.22■□□□□ 0.83
CHMP1A-202ENST00000535997 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
CHMP1A-202ENST00000535997 LMOD3Q0VAK6 560 aa20.22■□□□□ 0.83
CHMP1A-202ENST00000535997 ZBTB7BO15156 539 aaPredicted RBP20.21■□□□□ 0.83
CHMP1A-202ENST00000535997 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-202ENST00000535997 NRXN3Q9Y4C0 1643 aa20.21■□□□□ 0.83
CHMP1A-202ENST00000535997 SLKQ9H2G2 1235 aaPredicted RBP20.2■□□□□ 0.82
CHMP1A-202ENST00000535997 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
CHMP1A-202ENST00000535997 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
CHMP1A-202ENST00000535997 ESF1Q9H501 851 aaKnown RBP20.19■□□□□ 0.82
CHMP1A-202ENST00000535997 TECPR2O15040 1411 aa20.19■□□□□ 0.82
CHMP1A-202ENST00000535997 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
CHMP1A-202ENST00000535997 CHD1LQ86WJ1 897 aa20.18■□□□□ 0.82
CHMP1A-202ENST00000535997 MBIPQ9NS73 344 aa20.18■□□□□ 0.82
CHMP1A-202ENST00000535997 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
CHMP1A-202ENST00000535997 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
CHMP1A-202ENST00000535997 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
CHMP1A-202ENST00000535997 MFAP1P55081 439 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-202ENST00000535997 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
CHMP1A-202ENST00000535997 TWISTNBQ3B726 338 aaPredicted RBP20.15■□□□□ 0.82
CHMP1A-202ENST00000535997 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
CHMP1A-202ENST00000535997 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.82
CHMP1A-202ENST00000535997 RRS1Q15050 365 aaKnown RBP20.14■□□□□ 0.81
CHMP1A-202ENST00000535997 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
CHMP1A-202ENST00000535997 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.81
CHMP1A-202ENST00000535997 CPS1P31327 1500 aa20.13■□□□□ 0.81
CHMP1A-202ENST00000535997 ABCC4O15439 1325 aa20.13■□□□□ 0.81
CHMP1A-202ENST00000535997 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
CHMP1A-202ENST00000535997 BMP2KLQ5H9B9 411 aa20.13■□□□□ 0.81
CHMP1A-202ENST00000535997 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-202ENST00000535997 API5Q9BZZ5 524 aaKnown RBP20.12■□□□□ 0.81
CHMP1A-202ENST00000535997 RBM25P49756 843 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-202ENST00000535997 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
CHMP1A-202ENST00000535997 ANKRD45Q5TZF3 282 aa20.11■□□□□ 0.81
CHMP1A-202ENST00000535997 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
CHMP1A-202ENST00000535997 C3P01024 1663 aa20.1■□□□□ 0.81
CHMP1A-202ENST00000535997 AKAP12Q02952 1782 aa20.1■□□□□ 0.81
CHMP1A-202ENST00000535997 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
CHMP1A-202ENST00000535997 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
CHMP1A-202ENST00000535997 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
CHMP1A-202ENST00000535997 TMEM2Q9UHN6 1383 aa20.09■□□□□ 0.81
CHMP1A-202ENST00000535997 TNRQ92752 1358 aa20.09■□□□□ 0.81
CHMP1A-202ENST00000535997 FAM83GA6ND36 823 aa20.07■□□□□ 0.8
CHMP1A-202ENST00000535997 SIRT2Q8IXJ6 389 aa20.07■□□□□ 0.8
CHMP1A-202ENST00000535997 CHMP5Q9NZZ3 219 aa20.07■□□□□ 0.8
CHMP1A-202ENST00000535997 ITSN1Q15811 1721 aa20.07■□□□□ 0.8
CHMP1A-202ENST00000535997 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
CHMP1A-202ENST00000535997 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 HSCBQ8IWL3 235 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 C1orf115Q9H7X2 142 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 TTC21BQ7Z4L5 1316 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 ROBO2Q9HCK4 1378 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 SNX21Q969T3 373 aa20.06■□□□□ 0.8
CHMP1A-202ENST00000535997 EIF4A2Q14240 407 aaKnown RBP20.05■□□□□ 0.8
CHMP1A-202ENST00000535997 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
CHMP1A-202ENST00000535997 SULT6B1Q6IMI4 303 aa20.05■□□□□ 0.8
CHMP1A-202ENST00000535997 SPRYD3Q8NCJ5 442 aa20.04■□□□□ 0.8
CHMP1A-202ENST00000535997 CHL1O00533 1208 aa20.04■□□□□ 0.8
CHMP1A-202ENST00000535997 ACEP12821 1306 aa20.03■□□□□ 0.8
CHMP1A-202ENST00000535997 INTS3Q68E01 1043 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-202ENST00000535997 MCM4P33991 863 aa20.02■□□□□ 0.8
CHMP1A-202ENST00000535997 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.8
CHMP1A-202ENST00000535997 NRKQ7Z2Y5 1582 aa20.02■□□□□ 0.79
CHMP1A-202ENST00000535997 AEBP1Q8IUX7 1158 aa20.01■□□□□ 0.79
CHMP1A-202ENST00000535997 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
CHMP1A-202ENST00000535997 OVOS2A0A0J9YW53 1432 aa20■□□□□ 0.79
CHMP1A-202ENST00000535997 OVOS2Q6IE36 1432 aa20■□□□□ 0.79
CHMP1A-202ENST00000535997 KIAA0232Q92628 1395 aa20■□□□□ 0.79
CHMP1A-202ENST00000535997 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
CHMP1A-202ENST00000535997 DCTPP1Q9H773 170 aa20■□□□□ 0.79
CHMP1A-202ENST00000535997 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
CHMP1A-202ENST00000535997 TBC1D9Q6ZT07 1266 aa19.99■□□□□ 0.79
CHMP1A-202ENST00000535997 USP6P35125 1406 aa19.98■□□□□ 0.79
CHMP1A-202ENST00000535997 NCOA3Q9Y6Q9 1424 aa19.98■□□□□ 0.79
CHMP1A-202ENST00000535997 USP31Q70CQ4 1352 aa19.98■□□□□ 0.79
CHMP1A-202ENST00000535997 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-202ENST00000535997 DDIT3P35638 169 aa19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 HSP90AB2PQ58FF8 381 aa19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 LTKP29376 864 aa19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 L1TD1Q5T7N2 865 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 RPAP2Q8IXW5 612 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 KIF2CQ99661 725 aa19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 RTN4Q9NQC3 1192 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-202ENST00000535997 PTPRCP08575 1304 aa19.96■□□□□ 0.79
CHMP1A-202ENST00000535997 TOPAZ1Q8N9V7 1692 aa19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 MCM10Q7L590 875 aa19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 ANKRD44Q8N8A2 993 aa19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 CDC45O75419 566 aa19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 PLEKHM2Q8IWE5 1019 aa19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 CIZ1Q9ULV3 898 aaPredicted RBP19.95■□□□□ 0.78
CHMP1A-202ENST00000535997 SSH2Q76I76 1423 aa19.94■□□□□ 0.78
CHMP1A-202ENST00000535997 KIF13AQ9H1H9 1805 aa19.94■□□□□ 0.78
CHMP1A-202ENST00000535997 TTC21AQ8NDW8 1320 aa19.94■□□□□ 0.78
CHMP1A-202ENST00000535997 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
CHMP1A-202ENST00000535997 KRT24Q2M2I5 525 aa19.93■□□□□ 0.78
CHMP1A-202ENST00000535997 NALCNQ8IZF0 1738 aa19.92■□□□□ 0.78
CHMP1A-202ENST00000535997 EID1Q9Y6B2 187 aa19.92■□□□□ 0.78
CHMP1A-202ENST00000535997 RGS12O14924 1447 aa19.92■□□□□ 0.78
CHMP1A-202ENST00000535997 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms