RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PROM2Q8N271 834 aa14.47□□□□□ -0.09
CLSTN3-203ENST00000534830 PEAK1Q9H792 1746 aa14.46□□□□□ -0.09
CLSTN3-203ENST00000534830 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
CLSTN3-203ENST00000534830 ZBTB7CA1YPR0 619 aa14.46□□□□□ -0.09
CLSTN3-203ENST00000534830 DDB1Q16531 1140 aa14.46□□□□□ -0.09
CLSTN3-203ENST00000534830 CPDO75976 1380 aa14.46□□□□□ -0.1
CLSTN3-203ENST00000534830 PPIP5K1Q6PFW1 1433 aa14.45□□□□□ -0.1
CLSTN3-203ENST00000534830 MTFR1LQ9H019 292 aa14.45□□□□□ -0.1
CLSTN3-203ENST00000534830 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
CLSTN3-203ENST00000534830 COL5A2P05997 1499 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 CRB1P82279 1406 aa14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 SRPK2P78362 688 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 GPR162Q16538 588 aa14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
CLSTN3-203ENST00000534830 CEP350Q5VT06 3117 aa14.43□□□□□ -0.1
CLSTN3-203ENST00000534830 TXNRD1Q16881 649 aa14.43□□□□□ -0.1
CLSTN3-203ENST00000534830 ARXQ96QS3 562 aa14.43□□□□□ -0.1
CLSTN3-203ENST00000534830 ROCK2O75116 1388 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-203ENST00000534830 USP19O94966 1318 aa14.42□□□□□ -0.1
CLSTN3-203ENST00000534830 LRRC37A3O60309 1634 aa14.42□□□□□ -0.1
CLSTN3-203ENST00000534830 GCP02774 474 aa14.42□□□□□ -0.1
CLSTN3-203ENST00000534830 TOM1L2Q6ZVM7 507 aa14.42□□□□□ -0.1
CLSTN3-203ENST00000534830 NLRP13Q86W25 1043 aa14.41□□□□□ -0.1
CLSTN3-203ENST00000534830 MARCH10Q8NA82 808 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-203ENST00000534830 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
CLSTN3-203ENST00000534830 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
CLSTN3-203ENST00000534830 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
CLSTN3-203ENST00000534830 AKAP12Q02952 1782 aa14.4□□□□□ -0.1
CLSTN3-203ENST00000534830 USP6P35125 1406 aa14.4□□□□□ -0.1
CLSTN3-203ENST00000534830 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-203ENST00000534830 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
CLSTN3-203ENST00000534830 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
CLSTN3-203ENST00000534830 PIK3C2AO00443 1686 aa14.37□□□□□ -0.11
CLSTN3-203ENST00000534830 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-203ENST00000534830 SLIT3O75094 1523 aa14.36□□□□□ -0.11
CLSTN3-203ENST00000534830 MAP3K5Q99683 1374 aa14.36□□□□□ -0.11
CLSTN3-203ENST00000534830 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
CLSTN3-203ENST00000534830 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 COL18A1P39060 1754 aa14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 BCL9O00512 1426 aa14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-203ENST00000534830 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
CLSTN3-203ENST00000534830 NLRP6P59044 892 aa14.34□□□□□ -0.11
CLSTN3-203ENST00000534830 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 EXOC5O00471 708 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 TTC21BQ7Z4L5 1316 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
CLSTN3-203ENST00000534830 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
CLSTN3-203ENST00000534830 CSB-PGBD3P0DP91 1061 aa14.32□□□□□ -0.12
CLSTN3-203ENST00000534830 AXIN2Q9Y2T1 843 aa14.32□□□□□ -0.12
CLSTN3-203ENST00000534830 KAT6BQ8WYB5 2073 aa14.32□□□□□ -0.12
CLSTN3-203ENST00000534830 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
CLSTN3-203ENST00000534830 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
CLSTN3-203ENST00000534830 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
CLSTN3-203ENST00000534830 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
CLSTN3-203ENST00000534830 POLD1P28340 1107 aa14.3□□□□□ -0.12
CLSTN3-203ENST00000534830 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-203ENST00000534830 TTC21AQ8NDW8 1320 aa14.3□□□□□ -0.12
CLSTN3-203ENST00000534830 ZNF827Q17R98 1081 aa14.29□□□□□ -0.12
CLSTN3-203ENST00000534830 CARD10Q9BWT7 1032 aa14.29□□□□□ -0.12
CLSTN3-203ENST00000534830 ARHGEF25Q86VW2 580 aa14.28□□□□□ -0.12
CLSTN3-203ENST00000534830 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
CLSTN3-203ENST00000534830 NHSQ6T4R5 1651 aa14.27□□□□□ -0.12
CLSTN3-203ENST00000534830 PAPPAQ13219 1627 aa14.27□□□□□ -0.12
CLSTN3-203ENST00000534830 NFAT5O94916 1531 aa14.27□□□□□ -0.12
CLSTN3-203ENST00000534830 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
CLSTN3-203ENST00000534830 SOX12O15370 315 aa14.27□□□□□ -0.13
CLSTN3-203ENST00000534830 TESK2Q96S53 571 aa14.27□□□□□ -0.13
CLSTN3-203ENST00000534830 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
CLSTN3-203ENST00000534830 GRIN3BO60391 1043 aa14.26□□□□□ -0.13
CLSTN3-203ENST00000534830 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
CLSTN3-203ENST00000534830 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
CLSTN3-203ENST00000534830 TNS2Q63HR2 1409 aa14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 HSPA6P17066 643 aa14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 LRRC4BQ9NT99 713 aa14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 BTAF1O14981 1849 aa14.25□□□□□ -0.13
CLSTN3-203ENST00000534830 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
CLSTN3-203ENST00000534830 GPBP1L1Q9HC44 474 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-203ENST00000534830 ABCC6O95255 1503 aa14.24□□□□□ -0.13
CLSTN3-203ENST00000534830 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
CLSTN3-203ENST00000534830 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
CLSTN3-203ENST00000534830 ZNF526Q8TF50 670 aaPredicted RBP14.23□□□□□ -0.13
CLSTN3-203ENST00000534830 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
CLSTN3-203ENST00000534830 TFCP2L1Q9NZI6 479 aa14.22□□□□□ -0.13
CLSTN3-203ENST00000534830 EDC4Q6P2E9 1401 aaKnown RBP14.22□□□□□ -0.13
CLSTN3-203ENST00000534830 PNPLA7Q6ZV29 1317 aa14.21□□□□□ -0.13
CLSTN3-203ENST00000534830 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
CLSTN3-203ENST00000534830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLSTN3-203ENST00000534830 LTN1O94822 1766 aa14.21□□□□□ -0.13
CLSTN3-203ENST00000534830 A0A1W2PP64 1363 aa14.21□□□□□ -0.14
CLSTN3-203ENST00000534830 HDGFL2Q7Z4V5 671 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-203ENST00000534830 NME9Q86XW9 330 aa14.2□□□□□ -0.14
CLSTN3-203ENST00000534830 TMC1Q8TDI8 760 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms