RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 ANKRD26Q9UPS8 1709 aa11.39□□□□□ -0.59
SORL1-213ENST00000534754 XPCQ01831 940 aaPredicted RBP11.39□□□□□ -0.59
SORL1-213ENST00000534754 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
SORL1-213ENST00000534754 USP54Q70EL1 1684 aa11.38□□□□□ -0.59
SORL1-213ENST00000534754 USP6P35125 1406 aa11.38□□□□□ -0.59
SORL1-213ENST00000534754 NINLQ9Y2I6 1382 aa11.38□□□□□ -0.59
SORL1-213ENST00000534754 CGNL1Q0VF96 1302 aa11.38□□□□□ -0.59
SORL1-213ENST00000534754 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
SORL1-213ENST00000534754 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
SORL1-213ENST00000534754 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
SORL1-213ENST00000534754 E9PSI1 815 aa11.36□□□□□ -0.59
SORL1-213ENST00000534754 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
SORL1-213ENST00000534754 IGHDP01880 384 aa11.36□□□□□ -0.59
SORL1-213ENST00000534754 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
SORL1-213ENST00000534754 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
SORL1-213ENST00000534754 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
SORL1-213ENST00000534754 BCAR3O75815 825 aa11.35□□□□□ -0.59
SORL1-213ENST00000534754 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
SORL1-213ENST00000534754 COL22A1Q8NFW1 1626 aaPredicted RBP11.35□□□□□ -0.59
SORL1-213ENST00000534754 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
SORL1-213ENST00000534754 NGEFQ8N5V2 710 aa11.35□□□□□ -0.59
SORL1-213ENST00000534754 CARD14Q9BXL6 1004 aa11.35□□□□□ -0.59
SORL1-213ENST00000534754 NPC1L1Q9UHC9 1359 aa11.34□□□□□ -0.59
SORL1-213ENST00000534754 NSD3Q9BZ95 1437 aa11.34□□□□□ -0.59
SORL1-213ENST00000534754 CCDC146Q8IYE0 955 aa11.33□□□□□ -0.59
SORL1-213ENST00000534754 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.59
SORL1-213ENST00000534754 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.59
SORL1-213ENST00000534754 UPF2Q9HAU5 1272 aaKnown RBP11.33□□□□□ -0.59
SORL1-213ENST00000534754 TNS3Q68CZ2 1445 aa11.33□□□□□ -0.6
SORL1-213ENST00000534754 EDC4Q6P2E9 1401 aaKnown RBP11.33□□□□□ -0.6
SORL1-213ENST00000534754 APAF1O14727 1248 aa11.33□□□□□ -0.6
SORL1-213ENST00000534754 SEC24BO95487 1268 aa11.33□□□□□ -0.6
SORL1-213ENST00000534754 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
SORL1-213ENST00000534754 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
SORL1-213ENST00000534754 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
SORL1-213ENST00000534754 LTN1O94822 1766 aa11.33□□□□□ -0.6
SORL1-213ENST00000534754 HSPA1LP34931 641 aa11.32□□□□□ -0.6
SORL1-213ENST00000534754 PSME1Q06323 249 aa11.32□□□□□ -0.6
SORL1-213ENST00000534754 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
SORL1-213ENST00000534754 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
SORL1-213ENST00000534754 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
SORL1-213ENST00000534754 TERF2IPQ9NYB0 399 aa11.32□□□□□ -0.6
SORL1-213ENST00000534754 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
SORL1-213ENST00000534754 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
SORL1-213ENST00000534754 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
SORL1-213ENST00000534754 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
SORL1-213ENST00000534754 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
SORL1-213ENST00000534754 AAMPQ13685 434 aa11.31□□□□□ -0.6
SORL1-213ENST00000534754 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
SORL1-213ENST00000534754 TTC21BQ7Z4L5 1316 aa11.3□□□□□ -0.6
SORL1-213ENST00000534754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
SORL1-213ENST00000534754 TBC1D32Q96NH3 1257 aa11.3□□□□□ -0.6
SORL1-213ENST00000534754 ZNF692Q9BU19 519 aaPredicted RBP11.3□□□□□ -0.6
SORL1-213ENST00000534754 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
SORL1-213ENST00000534754 PNPLA6Q8IY17 1366 aa11.29□□□□□ -0.6
SORL1-213ENST00000534754 GOLGA6L3A6NEY3 463 aa11.29□□□□□ -0.6
SORL1-213ENST00000534754 NME9Q86XW9 330 aa11.29□□□□□ -0.6
SORL1-213ENST00000534754 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
SORL1-213ENST00000534754 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 PANK1Q8TE04 598 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 SLIT3O75094 1523 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
SORL1-213ENST00000534754 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
SORL1-213ENST00000534754 TTC21AQ8NDW8 1320 aa11.27□□□□□ -0.61
SORL1-213ENST00000534754 NFAT5O94916 1531 aa11.27□□□□□ -0.61
SORL1-213ENST00000534754 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.61
SORL1-213ENST00000534754 FYB1O15117 783 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 LRRC59Q96AG4 307 aaKnown RBP11.26□□□□□ -0.61
SORL1-213ENST00000534754 ARHGEF10O15013 1369 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 LRP6O75581 1613 aa11.26□□□□□ -0.61
SORL1-213ENST00000534754 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 MCM4P33991 863 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
SORL1-213ENST00000534754 GGNBP2Q9H3C7 697 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 COL18A1P39060 1754 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
SORL1-213ENST00000534754 JCADQ9P266 1359 aa11.24□□□□□ -0.61
SORL1-213ENST00000534754 CLCN1P35523 988 aa11.24□□□□□ -0.61
SORL1-213ENST00000534754 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
SORL1-213ENST00000534754 RGPD2P0DJD1 1756 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 RARSP54136 660 aaKnown RBP11.23□□□□□ -0.61
SORL1-213ENST00000534754 NLRP6P59044 892 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
SORL1-213ENST00000534754 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
SORL1-213ENST00000534754 ARXQ96QS3 562 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
SORL1-213ENST00000534754 CHMP5Q9NZZ3 219 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 PCDHB15Q9Y5E8 787 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 LMO7Q8WWI1 1683 aa11.23□□□□□ -0.61
SORL1-213ENST00000534754 FBLN1P23142 703 aa11.22□□□□□ -0.61
SORL1-213ENST00000534754 MRE11P49959 708 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms