RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 HOMEZQ8IX15 550 aa4.86□□□□□ -1.63
CSDE1-216ENST00000534389 RBM19Q9Y4C8 960 aaKnown RBP4.86□□□□□ -1.63
CSDE1-216ENST00000534389 LOC105371045A0A1W2PR82 267 aa4.85□□□□□ -1.63
CSDE1-216ENST00000534389 CENPBP07199 599 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-216ENST00000534389 SKOR1P84550 965 aa4.85□□□□□ -1.63
CSDE1-216ENST00000534389 RC3H1Q5TC82 1133 aaKnown RBP4.85□□□□□ -1.63
CSDE1-216ENST00000534389 SH3BP5LQ7L8J4 393 aa4.85□□□□□ -1.63
CSDE1-216ENST00000534389 C1orf115Q9H7X2 142 aa4.85□□□□□ -1.63
CSDE1-216ENST00000534389 WASF2Q9Y6W5 498 aa4.85□□□□□ -1.63
CSDE1-216ENST00000534389 TTC24A2A3L6 582 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-216ENST00000534389 ERFEQ4G0M1 354 aa4.84□□□□□ -1.63
CSDE1-216ENST00000534389 PPP1R12CQ9BZL4 782 aa4.84□□□□□ -1.63
CSDE1-216ENST00000534389 ALG2Q9H553 416 aa4.84□□□□□ -1.63
CSDE1-216ENST00000534389 TFIP11Q9UBB9 837 aaKnown RBP4.84□□□□□ -1.63
CSDE1-216ENST00000534389 DOLKQ9UPQ8 538 aa4.84□□□□□ -1.63
CSDE1-216ENST00000534389 PALM3A6NDB9 673 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-216ENST00000534389 TNFRSF10AO00220 468 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 GPR37L1O60883 481 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 ALDH1A1P00352 501 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 MYCP01106 439 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-216ENST00000534389 PSME1Q06323 249 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 EML3Q32P44 896 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 OXLD1Q5BKU9 147 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 SIRT1Q96EB6 747 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 ARXQ96QS3 562 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 KCTD15Q96SI1 283 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-216ENST00000534389 ANP32EQ9BTT0 268 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 CEP126Q9P2H0 1117 aa4.83□□□□□ -1.64
CSDE1-216ENST00000534389 WNT7AO00755 349 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 ATP9BO43861 1147 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 FSHRP23945 695 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 CDCA8Q53HL2 280 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 TRIM67Q6ZTA4 783 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 SH3RF1Q7Z6J0 888 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 CYP4X1Q8N118 509 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 DEPDC4Q8N2C3 294 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 ADAMTS19Q8TE59 1207 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 PKD2L1Q9P0L9 805 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 PCDHB11Q9Y5F2 797 aa4.82□□□□□ -1.64
CSDE1-216ENST00000534389 SHROOM4Q9ULL8 1493 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 GDF9O60383 454 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 GIGYF1O75420 1035 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-216ENST00000534389 CSB-PGBD3P0DP91 1061 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 DHX9Q08211 1270 aaKnown RBP4.81□□□□□ -1.64
CSDE1-216ENST00000534389 C4orf48Q5BLP8 95 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 LARP1Q6PKG0 1096 aaKnown RBP4.81□□□□□ -1.64
CSDE1-216ENST00000534389 TBC1D9Q6ZT07 1266 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 PLPP7Q8NBV4 271 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 MRGPRX2Q96LB1 330 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 VRTNQ9H8Y1 702 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 PDZRN3Q9UPQ7 1066 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 NOD1Q9Y239 953 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 TLL2Q9Y6L7 1015 aa4.81□□□□□ -1.64
CSDE1-216ENST00000534389 USP17L3A6NCW0 530 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 USP17L4A6NCW7 530 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 USP17L5A8MUK1 530 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 PIK3CDO00329 1044 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 PPP1R15AO75807 674 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-216ENST00000534389 PDE4CQ08493 712 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 USP4Q13107 963 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 MAP7D1Q3KQU3 841 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 USP17L2Q6R6M4 530 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 USP17L1Q7RTZ2 530 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 TRIM50Q86XT4 487 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 CCDC125Q86Z20 511 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 NFATC2IPQ8NCF5 419 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 PBXIP1Q96AQ6 731 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 PGPEP1Q9NXJ5 209 aa4.8□□□□□ -1.64
CSDE1-216ENST00000534389 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 ATP5J2-PTCD1G3V325 749 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 LZTS3O60299 673 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 GFRA3O60609 400 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PDIA4P13667 645 aaKnown RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 RASA1P20936 1047 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 ATP1A2P50993 1020 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PRR20EP86478 221 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PRR20CP86479 221 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PRR20DP86480 221 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PRR20BP86481 221 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 PRR20AP86496 221 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 NCOA4Q13772 614 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 TRMT44Q8IYL2 757 aaKnown RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 SEPT12Q8IYM1 358 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 SNIP1Q8TAD8 396 aaKnown RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 OCSTAMPQ9BR26 566 aa4.79□□□□□ -1.64
CSDE1-216ENST00000534389 IRX2Q9BZI1 471 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 MKRN1Q9UHC7 482 aaKnown RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 MAFBQ9Y5Q3 323 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-216ENST00000534389 ADH1CP00326 375 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 NR5A1Q13285 461 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 CCDC116Q8IYX3 515 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 UCN2Q96RP3 112 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 C1QTNF2Q9BXJ5 285 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 MAP4K5Q9Y4K4 846 aa4.78□□□□□ -1.64
CSDE1-216ENST00000534389 ERVH48-1M5A8F1 160 aa4.77□□□□□ -1.65
CSDE1-216ENST00000534389 NRG2O14511 850 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-216ENST00000534389 SIAH2O43255 324 aa4.77□□□□□ -1.65
CSDE1-216ENST00000534389 CFAP70Q5T0N1 1121 aa4.77□□□□□ -1.65
CSDE1-216ENST00000534389 ZNF594Q96JF6 807 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-216ENST00000534389 CYLDQ9NQC7 956 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms