RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NINLQ9Y2I6 1382 aa14.95□□□□□ -0.02
CCDC90B-218ENST00000533761 BRINP3Q76B58 766 aa14.94□□□□□ -0.02
CCDC90B-218ENST00000533761 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
CCDC90B-218ENST00000533761 USP32Q8NFA0 1604 aa14.93□□□□□ -0.02
CCDC90B-218ENST00000533761 KTN1Q86UP2 1357 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-218ENST00000533761 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
CCDC90B-218ENST00000533761 CABP1Q9NZU7 370 aa14.93□□□□□ -0.02
CCDC90B-218ENST00000533761 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
CCDC90B-218ENST00000533761 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
CCDC90B-218ENST00000533761 PPIP5K1Q6PFW1 1433 aa14.92□□□□□ -0.02
CCDC90B-218ENST00000533761 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
CCDC90B-218ENST00000533761 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
CCDC90B-218ENST00000533761 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
CCDC90B-218ENST00000533761 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
CCDC90B-218ENST00000533761 PMFBP1Q8TBY8 1022 aa14.91□□□□□ -0.02
CCDC90B-218ENST00000533761 FOXO3O43524 673 aa14.9□□□□□ -0.02
CCDC90B-218ENST00000533761 SLC12A5Q9H2X9 1139 aa14.9□□□□□ -0.02
CCDC90B-218ENST00000533761 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
CCDC90B-218ENST00000533761 NPHP3Q7Z494 1330 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 ROBO1Q9Y6N7 1651 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 KIF1AQ12756 1690 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 TOPAZ1Q8N9V7 1692 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 PSME1Q06323 249 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 ACEP12821 1306 aa14.89□□□□□ -0.03
CCDC90B-218ENST00000533761 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
CCDC90B-218ENST00000533761 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
CCDC90B-218ENST00000533761 FBXO41Q8TF61 875 aa14.88□□□□□ -0.03
CCDC90B-218ENST00000533761 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
CCDC90B-218ENST00000533761 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
CCDC90B-218ENST00000533761 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-218ENST00000533761 PANK3Q9H999 370 aa14.87□□□□□ -0.03
CCDC90B-218ENST00000533761 DOK7Q18PE1 504 aa14.85□□□□□ -0.03
CCDC90B-218ENST00000533761 MYOM1P52179 1685 aa14.85□□□□□ -0.03
CCDC90B-218ENST00000533761 RALBP1Q15311 655 aa14.85□□□□□ -0.03
CCDC90B-218ENST00000533761 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
CCDC90B-218ENST00000533761 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-218ENST00000533761 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-218ENST00000533761 ANKRD36BQ8N2N9 1353 aa14.84□□□□□ -0.03
CCDC90B-218ENST00000533761 DDX17Q92841 729 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-218ENST00000533761 SOS2Q07890 1332 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-218ENST00000533761 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-218ENST00000533761 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
CCDC90B-218ENST00000533761 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
CCDC90B-218ENST00000533761 G3V3G9 751 aa14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 DPY19L2Q6NUT2 758 aa14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 LRRC59Q96AG4 307 aaKnown RBP14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 NHSL1Q5SYE7 1610 aa14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 AHDC1Q5TGY3 1603 aaPredicted RBP14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 NPC1L1Q9UHC9 1359 aa14.82□□□□□ -0.04
CCDC90B-218ENST00000533761 CD163L1Q9NR16 1453 aa14.81□□□□□ -0.04
CCDC90B-218ENST00000533761 USP6P35125 1406 aa14.81□□□□□ -0.04
CCDC90B-218ENST00000533761 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-218ENST00000533761 VARS2Q5ST30 1063 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-218ENST00000533761 BOLA1Q9Y3E2 137 aa14.81□□□□□ -0.04
CCDC90B-218ENST00000533761 PXDNQ92626 1479 aa14.8□□□□□ -0.04
CCDC90B-218ENST00000533761 PTGER2P43116 358 aa14.8□□□□□ -0.04
CCDC90B-218ENST00000533761 PSEN1P49768 467 aa14.8□□□□□ -0.04
CCDC90B-218ENST00000533761 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
CCDC90B-218ENST00000533761 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
CCDC90B-218ENST00000533761 PHLPP1O60346 1717 aa14.79□□□□□ -0.04
CCDC90B-218ENST00000533761 HSPA1LP34931 641 aa14.79□□□□□ -0.04
CCDC90B-218ENST00000533761 CGNL1Q0VF96 1302 aa14.79□□□□□ -0.04
CCDC90B-218ENST00000533761 EDC4Q6P2E9 1401 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-218ENST00000533761 NSD2O96028 1365 aa14.78□□□□□ -0.04
CCDC90B-218ENST00000533761 SPATA31A3Q5VYP0 1347 aa14.78□□□□□ -0.04
CCDC90B-218ENST00000533761 TTC21AQ8NDW8 1320 aa14.78□□□□□ -0.04
CCDC90B-218ENST00000533761 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.04
CCDC90B-218ENST00000533761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.77□□□□□ -0.043e-6■■■■□ 25.7
CCDC90B-218ENST00000533761 ABTB2Q8N961 1025 aa14.77□□□□□ -0.04
CCDC90B-218ENST00000533761 CARD14Q9BXL6 1004 aa14.77□□□□□ -0.04
CCDC90B-218ENST00000533761 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.04
CCDC90B-218ENST00000533761 TTC21BQ7Z4L5 1316 aa14.77□□□□□ -0.05
CCDC90B-218ENST00000533761 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-218ENST00000533761 SSH2Q76I76 1423 aa14.77□□□□□ -0.05
CCDC90B-218ENST00000533761 PARD3Q8TEW0 1356 aa14.77□□□□□ -0.05
CCDC90B-218ENST00000533761 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
CCDC90B-218ENST00000533761 RIMBP2O15034 1052 aa14.76□□□□□ -0.05
CCDC90B-218ENST00000533761 COL16A1Q07092 1604 aaPredicted RBP14.75□□□□□ -0.05
CCDC90B-218ENST00000533761 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
CCDC90B-218ENST00000533761 NSD3Q9BZ95 1437 aa14.75□□□□□ -0.05
CCDC90B-218ENST00000533761 ZNF687Q8N1G0 1237 aa14.75□□□□□ -0.05
CCDC90B-218ENST00000533761 TRPM3Q9HCF6 1732 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-218ENST00000533761 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-218ENST00000533761 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-218ENST00000533761 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
CCDC90B-218ENST00000533761 NLRP6P59044 892 aa14.73□□□□□ -0.05
CCDC90B-218ENST00000533761 GSE1Q14687 1217 aa14.73□□□□□ -0.05
CCDC90B-218ENST00000533761 JCADQ9P266 1359 aa14.73□□□□□ -0.05
CCDC90B-218ENST00000533761 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
CCDC90B-218ENST00000533761 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
CCDC90B-218ENST00000533761 FYB1O15117 783 aa14.72□□□□□ -0.05
CCDC90B-218ENST00000533761 CHRM1P11229 460 aaPredicted RBP14.72□□□□□ -0.05
CCDC90B-218ENST00000533761 CNGB1Q14028 1251 aaPredicted RBP14.72□□□□□ -0.05
CCDC90B-218ENST00000533761 NME9Q86XW9 330 aa14.72□□□□□ -0.05
CCDC90B-218ENST00000533761 NUTM2GQ5VZR2 741 aa14.71□□□□□ -0.05
CCDC90B-218ENST00000533761 ALS2Q96Q42 1657 aa14.71□□□□□ -0.05
CCDC90B-218ENST00000533761 PNPLA6Q8IY17 1366 aa14.71□□□□□ -0.06
CCDC90B-218ENST00000533761 COG3Q96JB2 828 aa14.7□□□□□ -0.06
CCDC90B-218ENST00000533761 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
CCDC90B-218ENST00000533761 USP31Q70CQ4 1352 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms