RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 LMO7Q8WWI1 1683 aa9.49□□□□□ -0.89
SOX6-215ENST00000533411 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
SOX6-215ENST00000533411 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
SOX6-215ENST00000533411 SLIT3O75094 1523 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
SOX6-215ENST00000533411 NLRP13Q86W25 1043 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 PANK3Q9H999 370 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 NINLQ9Y2I6 1382 aa9.48□□□□□ -0.89
SOX6-215ENST00000533411 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
SOX6-215ENST00000533411 CD163L1Q9NR16 1453 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 A0A0G2JS52 829 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 GCP02774 474 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 NLRP6P59044 892 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 MYT1Q01538 1121 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 RTN4Q9NQC3 1192 aaKnown RBP9.47□□□□□ -0.89
SOX6-215ENST00000533411 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 THSD7AQ9UPZ6 1657 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 TTC21BQ7Z4L5 1316 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 ANKRD26Q9UPS8 1709 aa9.47□□□□□ -0.89
SOX6-215ENST00000533411 RGPD5Q99666 1765 aa9.46□□□□□ -0.9
SOX6-215ENST00000533411 HNRNPUQ00839 825 aaKnown RBP eCLIP9.46□□□□□ -0.9
SOX6-215ENST00000533411 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
SOX6-215ENST00000533411 KIF20BQ96Q89 1820 aa9.46□□□□□ -0.9
SOX6-215ENST00000533411 CPDO75976 1380 aa9.46□□□□□ -0.9
SOX6-215ENST00000533411 EP400Q96L91 3159 aa9.46□□□□□ -0.9
SOX6-215ENST00000533411 COL18A1P39060 1754 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 SOX12O15370 315 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
SOX6-215ENST00000533411 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
SOX6-215ENST00000533411 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
SOX6-215ENST00000533411 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
SOX6-215ENST00000533411 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 LARP1Q6PKG0 1096 aaKnown RBP9.44□□□□□ -0.9
SOX6-215ENST00000533411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
SOX6-215ENST00000533411 FAM9BQ8IZU0 186 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
SOX6-215ENST00000533411 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 GTF3C3Q9Y5Q9 886 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 TTC21AQ8NDW8 1320 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 NSD3Q9BZ95 1437 aa9.44□□□□□ -0.9
SOX6-215ENST00000533411 COL5A2P05997 1499 aaPredicted RBP9.44□□□□□ -0.9
SOX6-215ENST00000533411 USP54Q70EL1 1684 aa9.43□□□□□ -0.9
SOX6-215ENST00000533411 NFAT5O94916 1531 aa9.43□□□□□ -0.9
SOX6-215ENST00000533411 A0A1W2PP64 1363 aa9.43□□□□□ -0.9
SOX6-215ENST00000533411 EVA1CP58658 441 aa9.43□□□□□ -0.9
SOX6-215ENST00000533411 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
SOX6-215ENST00000533411 NME9Q86XW9 330 aa9.43□□□□□ -0.9
SOX6-215ENST00000533411 NSD2O96028 1365 aa9.42□□□□□ -0.9
SOX6-215ENST00000533411 ANKRD36BQ8N2N9 1353 aa9.42□□□□□ -0.9
SOX6-215ENST00000533411 ZBED9Q6R2W3 1325 aa9.42□□□□□ -0.9
SOX6-215ENST00000533411 LTN1O94822 1766 aa9.42□□□□□ -0.9
SOX6-215ENST00000533411 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
SOX6-215ENST00000533411 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
SOX6-215ENST00000533411 INSRP06213 1382 aa9.41□□□□□ -0.9
SOX6-215ENST00000533411 AATKQ6ZMQ8 1374 aa9.41□□□□□ -0.9
SOX6-215ENST00000533411 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
SOX6-215ENST00000533411 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
SOX6-215ENST00000533411 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
SOX6-215ENST00000533411 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
SOX6-215ENST00000533411 TNS1Q9HBL0 1735 aaKnown RBP9.4□□□□□ -0.9
SOX6-215ENST00000533411 DEFB132Q7Z7B7 95 aa9.4□□□□□ -0.9
SOX6-215ENST00000533411 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
SOX6-215ENST00000533411 CRB1P82279 1406 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 RGPD1P0DJD0 1748 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
SOX6-215ENST00000533411 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 OVOS2A0A0J9YW53 1432 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 OVOS2Q6IE36 1432 aa9.39□□□□□ -0.91
SOX6-215ENST00000533411 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
SOX6-215ENST00000533411 CGNL1Q0VF96 1302 aa9.38□□□□□ -0.91
SOX6-215ENST00000533411 KCNH5Q8NCM2 988 aa9.38□□□□□ -0.91
SOX6-215ENST00000533411 PNISRQ8TF01 805 aaKnown RBP9.38□□□□□ -0.91
SOX6-215ENST00000533411 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
SOX6-215ENST00000533411 WDR17Q8IZU2 1322 aa9.37□□□□□ -0.91
SOX6-215ENST00000533411 NEFLP07196 543 aa9.37□□□□□ -0.91
SOX6-215ENST00000533411 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
SOX6-215ENST00000533411 TOM1L2Q6ZVM7 507 aa9.37□□□□□ -0.91
SOX6-215ENST00000533411 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
SOX6-215ENST00000533411 ABCC6O95255 1503 aa9.36□□□□□ -0.91
SOX6-215ENST00000533411 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
SOX6-215ENST00000533411 FBLN1P23142 703 aa9.36□□□□□ -0.91
SOX6-215ENST00000533411 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
SOX6-215ENST00000533411 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
SOX6-215ENST00000533411 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
SOX6-215ENST00000533411 PEAK1Q9H792 1746 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms