RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 BARGINQ6ZT62 677 aa21.75■■□□□ 1.07
DEPDC7-204ENST00000532078 USP35Q9P2H5 1018 aa21.75■■□□□ 1.07
DEPDC7-204ENST00000532078 PIK3C2AO00443 1686 aa21.75■■□□□ 1.07
DEPDC7-204ENST00000532078 COL5A2P05997 1499 aaPredicted RBP21.74■■□□□ 1.07
DEPDC7-204ENST00000532078 SPDYE4A6NLX3 237 aa21.73■■□□□ 1.07
DEPDC7-204ENST00000532078 LARP1Q6PKG0 1096 aaKnown RBP21.73■■□□□ 1.07
DEPDC7-204ENST00000532078 FAM196AQ6ZSG2 479 aa21.73■■□□□ 1.07
DEPDC7-204ENST00000532078 LRP5O75197 1615 aa21.73■■□□□ 1.07
DEPDC7-204ENST00000532078 NLRP6P59044 892 aa21.72■■□□□ 1.07
DEPDC7-204ENST00000532078 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
DEPDC7-204ENST00000532078 AKAP12Q02952 1782 aa21.71■■□□□ 1.07
DEPDC7-204ENST00000532078 EN1Q05925 392 aaPredicted RBP21.71■■□□□ 1.07
DEPDC7-204ENST00000532078 THRAP3Q9Y2W1 955 aaKnown RBP21.71■■□□□ 1.07
DEPDC7-204ENST00000532078 PARP4Q9UKK3 1724 aaKnown RBP21.7■■□□□ 1.06
DEPDC7-204ENST00000532078 PDE3BQ13370 1112 aa21.7■■□□□ 1.06
DEPDC7-204ENST00000532078 AATKQ6ZMQ8 1374 aa21.7■■□□□ 1.06
DEPDC7-204ENST00000532078 CRB1P82279 1406 aa21.7■■□□□ 1.06
DEPDC7-204ENST00000532078 ZBTB7CA1YPR0 619 aa21.68■■□□□ 1.06
DEPDC7-204ENST00000532078 REM2Q8IYK8 340 aaPredicted RBP21.68■■□□□ 1.06
DEPDC7-204ENST00000532078 SBNO2Q9Y2G9 1366 aa21.68■■□□□ 1.06
DEPDC7-204ENST00000532078 TRIM37O94972 964 aa21.67■■□□□ 1.06
DEPDC7-204ENST00000532078 PARD3Q8TEW0 1356 aa21.66■■□□□ 1.06
DEPDC7-204ENST00000532078 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
DEPDC7-204ENST00000532078 CPSF1Q10570 1443 aaKnown RBP21.65■■□□□ 1.06
DEPDC7-204ENST00000532078 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
DEPDC7-204ENST00000532078 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
DEPDC7-204ENST00000532078 COL18A1P39060 1754 aa21.64■■□□□ 1.06
DEPDC7-204ENST00000532078 MON2Q7Z3U7 1717 aa21.63■■□□□ 1.05
DEPDC7-204ENST00000532078 EZH2Q15910 746 aaKnown RBP21.63■■□□□ 1.05
DEPDC7-204ENST00000532078 LRRC37A3O60309 1634 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 KTN1Q86UP2 1357 aaKnown RBP21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 TONSLQ96HA7 1378 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 C11orf95C9JLR9 678 aaPredicted RBP21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 APBA3O96018 575 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 KCNH5Q8NCM2 988 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 CAMKK2Q96RR4 588 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 RREB1Q92766 1687 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
DEPDC7-204ENST00000532078 NFAT5O94916 1531 aa21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 R3HDM1Q15032 1099 aaKnown RBP21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 ABCC6O95255 1503 aa21.6■■□□□ 1.05
DEPDC7-204ENST00000532078 WDR17Q8IZU2 1322 aa21.59■■□□□ 1.05
DEPDC7-204ENST00000532078 TOM1L2Q6ZVM7 507 aa21.59■■□□□ 1.05
DEPDC7-204ENST00000532078 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
DEPDC7-204ENST00000532078 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.05
DEPDC7-204ENST00000532078 PEAK1Q9H792 1746 aa21.58■■□□□ 1.05
DEPDC7-204ENST00000532078 USP54Q70EL1 1684 aa21.58■■□□□ 1.05
DEPDC7-204ENST00000532078 SOX12O15370 315 aa21.56■■□□□ 1.04
DEPDC7-204ENST00000532078 AXIN2Q9Y2T1 843 aa21.56■■□□□ 1.04
DEPDC7-204ENST00000532078 RGPD5Q99666 1765 aa21.56■■□□□ 1.04
DEPDC7-204ENST00000532078 DDB1Q16531 1140 aa21.55■■□□□ 1.04
DEPDC7-204ENST00000532078 CDCA7Q9BWT1 371 aaPredicted RBP21.55■■□□□ 1.04
DEPDC7-204ENST00000532078 CD163L1Q9NR16 1453 aa21.54■■□□□ 1.04
DEPDC7-204ENST00000532078 RGPD3A6NKT7 1758 aaPredicted RBP21.53■■□□□ 1.04
DEPDC7-204ENST00000532078 RGPD4Q7Z3J3 1758 aa21.53■■□□□ 1.04
DEPDC7-204ENST00000532078 USP31Q70CQ4 1352 aa21.53■■□□□ 1.04
DEPDC7-204ENST00000532078 CSB-PGBD3P0DP91 1061 aa21.53■■□□□ 1.04
DEPDC7-204ENST00000532078 HDGFL2Q7Z4V5 671 aaPredicted RBP21.52■■□□□ 1.04
DEPDC7-204ENST00000532078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.52■■□□□ 1.04
DEPDC7-204ENST00000532078 CARD10Q9BWT7 1032 aa21.52■■□□□ 1.04
DEPDC7-204ENST00000532078 SBF2Q86WG5 1849 aa21.52■■□□□ 1.04
DEPDC7-204ENST00000532078 TMC1Q8TDI8 760 aa21.51■■□□□ 1.03
DEPDC7-204ENST00000532078 EDC4Q6P2E9 1401 aaKnown RBP21.51■■□□□ 1.03
DEPDC7-204ENST00000532078 NBPF14Q5TI25 921 aa21.5■■□□□ 1.03
DEPDC7-204ENST00000532078 CCDC7Q96M83 1385 aa21.49■■□□□ 1.03
DEPDC7-204ENST00000532078 TERF2IPQ9NYB0 399 aa21.49■■□□□ 1.03
DEPDC7-204ENST00000532078 LTN1O94822 1766 aa21.48■■□□□ 1.03
DEPDC7-204ENST00000532078 BCL9O00512 1426 aa21.48■■□□□ 1.03
DEPDC7-204ENST00000532078 NME9Q86XW9 330 aa21.48■■□□□ 1.03
DEPDC7-204ENST00000532078 PUS7Q96PZ0 661 aaKnown RBP21.48■■□□□ 1.03
DEPDC7-204ENST00000532078 FKBP8Q14318 412 aa21.47■■□□□ 1.03
DEPDC7-204ENST00000532078 A0A1W2PP64 1363 aa21.47■■□□□ 1.03
DEPDC7-204ENST00000532078 NINLQ9Y2I6 1382 aa21.47■■□□□ 1.03
DEPDC7-204ENST00000532078 SPDYE1Q8NFV5 336 aaPredicted RBP21.46■■□□□ 1.03
DEPDC7-204ENST00000532078 SLC12A5Q9H2X9 1139 aa21.46■■□□□ 1.03
DEPDC7-204ENST00000532078 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
DEPDC7-204ENST00000532078 MARCH10Q8NA82 808 aaPredicted RBP21.45■■□□□ 1.02
DEPDC7-204ENST00000532078 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
DEPDC7-204ENST00000532078 PITPNM1O00562 1244 aa21.44■■□□□ 1.02
DEPDC7-204ENST00000532078 PLSCR1O15162 318 aa21.44■■□□□ 1.02
DEPDC7-204ENST00000532078 ERBB3P21860 1342 aa21.44■■□□□ 1.02
DEPDC7-204ENST00000532078 CHRDL2Q6WN34 429 aa21.43■■□□□ 1.02
DEPDC7-204ENST00000532078 EXOC5O00471 708 aa21.42■■□□□ 1.02
DEPDC7-204ENST00000532078 SLC24A1O60721 1099 aa21.42■■□□□ 1.02
DEPDC7-204ENST00000532078 TESK2Q96S53 571 aa21.41■■□□□ 1.02
DEPDC7-204ENST00000532078 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
DEPDC7-204ENST00000532078 TRIM26Q12899 539 aaPredicted RBP21.4■■□□□ 1.02
DEPDC7-204ENST00000532078 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
DEPDC7-204ENST00000532078 NHSQ6T4R5 1651 aa21.38■■□□□ 1.01
DEPDC7-204ENST00000532078 FAM208AQ9UK61 1670 aaKnown RBP21.38■■□□□ 1.01
DEPDC7-204ENST00000532078 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
DEPDC7-204ENST00000532078 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
DEPDC7-204ENST00000532078 IL2RBP14784 551 aa21.36■■□□□ 1.01
DEPDC7-204ENST00000532078 CLEC11AQ9Y240 323 aa21.36■■□□□ 1.01
DEPDC7-204ENST00000532078 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
DEPDC7-204ENST00000532078 ANO8Q9HCE9 1232 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms