RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 JMYQ8N9B5 988 aa20.78■□□□□ 0.92
PCDHA8-202ENST00000531613 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 CCAR1Q8IX12 1150 aaKnown RBP20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 TRIM22Q8IYM9 498 aa20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 KCNH5Q8NCM2 988 aa20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 SRGAP3O43295 1099 aa20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 MRE11P49959 708 aa20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 SETQ01105 290 aaPredicted RBP20.77■□□□□ 0.92
PCDHA8-202ENST00000531613 RNF214Q8ND24 703 aa20.77■□□□□ 0.91
PCDHA8-202ENST00000531613 NASPP49321 788 aaPredicted RBP20.76■□□□□ 0.91
PCDHA8-202ENST00000531613 ZC3H6P61129 1189 aaKnown RBP20.76■□□□□ 0.91
PCDHA8-202ENST00000531613 ATP2B2Q01814 1243 aa20.76■□□□□ 0.91
PCDHA8-202ENST00000531613 RUFY1Q96T51 708 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 ARGLU1Q9NWB6 273 aaPredicted RBP20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 FIBPO43427 364 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 CDR1P51861 262 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 XPCQ01831 940 aaPredicted RBP20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 FAM43AQ8N2R8 423 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 CCDC173Q0VFZ6 552 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 TRIM5Q9C035 493 aa20.75■□□□□ 0.91
PCDHA8-202ENST00000531613 KIAA0586Q9BVV6 1533 aa20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 FILIP1LQ4L180 1135 aa20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 ZFYVE27Q5T4F4 411 aa20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 CAVIN1Q6NZI2 390 aaKnown RBP20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 AACSQ86V21 672 aa20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
PCDHA8-202ENST00000531613 TRAK2O60296 914 aa20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 KRT18P05783 430 aaKnown RBP20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 TEX35Q5T0J7 233 aa20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 TIAM1Q13009 1591 aa20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 FKBP4Q02790 459 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 ACBD3Q9H3P7 528 aa20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 CCDC39Q9UFE4 941 aa20.73■□□□□ 0.91
PCDHA8-202ENST00000531613 PRPF40AO75400 957 aaKnown RBP20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 TMEM132AQ24JP5 1023 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 RPAP2Q8IXW5 612 aaPredicted RBP20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 MAGEC2Q9UBF1 373 aaPredicted RBP20.72■□□□□ 0.91
PCDHA8-202ENST00000531613 CCDC69A6NI79 296 aa20.71■□□□□ 0.91
PCDHA8-202ENST00000531613 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
PCDHA8-202ENST00000531613 CHD1LQ86WJ1 897 aa20.71■□□□□ 0.91
PCDHA8-202ENST00000531613 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
PCDHA8-202ENST00000531613 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.91
PCDHA8-202ENST00000531613 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
PCDHA8-202ENST00000531613 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
PCDHA8-202ENST00000531613 STARD3NLO95772 234 aa20.7■□□□□ 0.9
PCDHA8-202ENST00000531613 AK7Q96M32 723 aa20.7■□□□□ 0.9
PCDHA8-202ENST00000531613 SMC2O95347 1197 aa20.7■□□□□ 0.9
PCDHA8-202ENST00000531613 BLOC1S2Q6QNY1 142 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 STK3Q13188 491 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 SMARCE1Q969G3 411 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 FAM13BQ9NYF5 915 aa20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.69■□□□□ 0.9
PCDHA8-202ENST00000531613 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 MAP4K4O95819 1239 aaPredicted RBP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 WWC2Q6AWC2 1192 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 CCDC141Q6ZP82 1450 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 WDR33Q9C0J8 1336 aaKnown RBP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 KRI1Q8N9T8 703 aaKnown RBP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 TSPY26PQ9H489 355 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 HSP90B2PQ58FF3 399 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 STK11IPQ8N1F8 1099 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 RBM5P52756 815 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 NUP133Q8WUM0 1156 aa20.68■□□□□ 0.9
PCDHA8-202ENST00000531613 IGHMBP2P38935 993 aaKnown RBP20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 CAGE1Q8TC20 777 aa20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 IL1RAPL2Q9NP60 686 aa20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 RDXP35241 583 aaKnown RBP20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 ZNF771Q7L3S4 317 aaPredicted RBP20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 TDO2P48775 406 aa20.67■□□□□ 0.9
PCDHA8-202ENST00000531613 CDKL5O76039 1030 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 RAI14Q9P0K7 980 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 KRT85P78386 507 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 UBAC1Q9BSL1 405 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 KRT32Q14532 448 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
PCDHA8-202ENST00000531613 ME1P48163 572 aa20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 K7ELQ4 463 aaPredicted RBP20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 LARP1BQ659C4 914 aaKnown RBP20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 NOL7Q9UMY1 257 aaKnown RBP20.65■□□□□ 0.9
PCDHA8-202ENST00000531613 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.9
PCDHA8-202ENST00000531613 TTLL5Q6EMB2 1281 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms