RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 FAM135AQ9P2D6 1515 aa9.47□□□□□ -0.89
PTPRK-219ENST00000531050 NUCB2P80303 420 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 GRIPAP1Q4V328 841 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 TMED8Q6PL24 325 aaPredicted RBP9.46□□□□□ -0.89
PTPRK-219ENST00000531050 RASSF4Q9H2L5 321 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 TSPY26PQ9H489 355 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 TNNQ9UQP3 1299 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 DMRT2Q9Y5R5 561 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 CHD1O14646 1710 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 KIF16BQ96L93 1317 aa9.46□□□□□ -0.89
PTPRK-219ENST00000531050 SAMD9LQ8IVG5 1584 aa9.46□□□□□ -0.9
PTPRK-219ENST00000531050 HSP90B1P14625 803 aaKnown RBP9.46□□□□□ -0.9
PTPRK-219ENST00000531050 CDC42BPBQ9Y5S2 1711 aa9.46□□□□□ -0.9
PTPRK-219ENST00000531050 PKD2Q13563 968 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPRK-219ENST00000531050 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 REC8O95072 547 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 GYS2P54840 703 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 CTR9Q6PD62 1173 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 HOMEZQ8IX15 550 aa9.45□□□□□ -0.9
PTPRK-219ENST00000531050 ARHGEF12Q9NZN5 1544 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 PLXNC1O60486 1568 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 KCNF1Q9H3M0 494 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 USP25Q9UHP3 1055 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 CEP83Q9Y592 693 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 PTPRGP23470 1445 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 ADCY5O95622 1261 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 EGFL6Q8IUX8 553 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 CHAMP1Q96JM3 812 aa9.44□□□□□ -0.9
PTPRK-219ENST00000531050 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
PTPRK-219ENST00000531050 UVSSAQ2YD98 709 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 KMT5BQ4FZB7 885 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 ZDHHC9Q9Y397 364 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 CASQ1P31415 396 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
PTPRK-219ENST00000531050 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 KIF1BPQ96EK5 621 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 BRMS1Q9HCU9 246 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 NUP155O75694 1391 aa9.43□□□□□ -0.9
PTPRK-219ENST00000531050 CCDC141Q6ZP82 1450 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 TRIM66O15016 1216 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 CCDC172P0C7W6 258 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 MUM1L1Q5H9M0 696 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-219ENST00000531050 SLC26A8Q96RN1 970 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 RAD50Q92878 1312 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 MBD3O95983 291 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 PPP2R1AP30153 589 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 SYT10Q6XYQ8 523 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 NOL10Q9BSC4 688 aaKnown RBP9.42□□□□□ -0.9
PTPRK-219ENST00000531050 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
PTPRK-219ENST00000531050 TTC37Q6PGP7 1564 aa9.41□□□□□ -0.9
PTPRK-219ENST00000531050 APAF1O14727 1248 aa9.41□□□□□ -0.9
PTPRK-219ENST00000531050 TRHP20396 242 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-219ENST00000531050 RARSP54136 660 aaKnown RBP9.41□□□□□ -0.9
PTPRK-219ENST00000531050 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
PTPRK-219ENST00000531050 MAST1Q9Y2H9 1570 aa9.41□□□□□ -0.9
PTPRK-219ENST00000531050 MYO1CO00159 1063 aa9.4□□□□□ -0.9
PTPRK-219ENST00000531050 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
PTPRK-219ENST00000531050 UNC13BO14795 1591 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 SYCP2Q9BX26 1530 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 PHF14O94880 888 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 TSPY4P0CV99 314 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 TSPY10P0CW01 314 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 C10orf67Q8IYJ2 551 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 TOMM22Q9NS69 142 aa9.4□□□□□ -0.91
PTPRK-219ENST00000531050 ABCC2Q92887 1545 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 ANKRD36BQ8N2N9 1353 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■■■□ 19.5
PTPRK-219ENST00000531050 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
PTPRK-219ENST00000531050 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-219ENST00000531050 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 CEP120Q8N960 986 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 COL17A1Q9UMD9 1497 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-219ENST00000531050 SATB1Q01826 763 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 FBXO38Q6PIJ6 1188 aa9.39□□□□□ -0.91
PTPRK-219ENST00000531050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTPRK-219ENST00000531050 MYO5CQ9NQX4 1742 aa9.38□□□□□ -0.91
PTPRK-219ENST00000531050 NEK11Q8NG66 645 aa9.38□□□□□ -0.91
PTPRK-219ENST00000531050 DONSONQ9NYP3 566 aa9.38□□□□□ -0.91
PTPRK-219ENST00000531050 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
PTPRK-219ENST00000531050 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
PTPRK-219ENST00000531050 JRKLQ9Y4A0 524 aa9.38□□□□□ -0.91
PTPRK-219ENST00000531050 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 KDM4AO75164 1064 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 ZGPATQ8N5A5 531 aaKnown RBP9.37□□□□□ -0.91
PTPRK-219ENST00000531050 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 GOLGA6L6A8MZA4 724 aa9.37□□□□□ -0.91
PTPRK-219ENST00000531050 AP5Z1O43299 807 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms