RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
C11orf54-209ENST00000530620 PARP4Q9UKK3 1724 aaKnown RBP15.44■□□□□ 0.06
C11orf54-209ENST00000530620 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
C11orf54-209ENST00000530620 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
C11orf54-209ENST00000530620 RREB1Q92766 1687 aa15.44■□□□□ 0.06
C11orf54-209ENST00000530620 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
C11orf54-209ENST00000530620 SSH2Q76I76 1423 aa15.43■□□□□ 0.06
C11orf54-209ENST00000530620 PLEKHG3A1L390 1219 aa15.43■□□□□ 0.06
C11orf54-209ENST00000530620 BAG6P46379 1132 aa15.43■□□□□ 0.06
C11orf54-209ENST00000530620 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
C11orf54-209ENST00000530620 USP19O94966 1318 aa15.43■□□□□ 0.06
C11orf54-209ENST00000530620 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
C11orf54-209ENST00000530620 CPDO75976 1380 aa15.41■□□□□ 0.06
C11orf54-209ENST00000530620 NUP188Q5SRE5 1749 aa15.41■□□□□ 0.06
C11orf54-209ENST00000530620 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
C11orf54-209ENST00000530620 RGPD5Q99666 1765 aa15.41■□□□□ 0.06
C11orf54-209ENST00000530620 SLIT3O75094 1523 aa15.4■□□□□ 0.06
C11orf54-209ENST00000530620 PSDA5PKW4 1024 aaPredicted RBP15.4■□□□□ 0.06
C11orf54-209ENST00000530620 IFNLR1Q8IU57 520 aaPredicted RBP15.4■□□□□ 0.06
C11orf54-209ENST00000530620 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
C11orf54-209ENST00000530620 CABP2Q9NPB3 220 aa15.4■□□□□ 0.06
C11orf54-209ENST00000530620 USP6P35125 1406 aa15.4■□□□□ 0.06
C11orf54-209ENST00000530620 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
C11orf54-209ENST00000530620 COL18A1P39060 1754 aa15.39■□□□□ 0.05
C11orf54-209ENST00000530620 EN1Q05925 392 aaPredicted RBP15.39■□□□□ 0.05
C11orf54-209ENST00000530620 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
C11orf54-209ENST00000530620 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
C11orf54-209ENST00000530620 COL5A2P05997 1499 aaPredicted RBP15.39■□□□□ 0.05
C11orf54-209ENST00000530620 SBF2Q86WG5 1849 aa15.38■□□□□ 0.05
C11orf54-209ENST00000530620 L3MBTL2Q969R5 705 aa15.37■□□□□ 0.05
C11orf54-209ENST00000530620 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
C11orf54-209ENST00000530620 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
C11orf54-209ENST00000530620 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
C11orf54-209ENST00000530620 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
C11orf54-209ENST00000530620 HAX1O00165 279 aa15.35■□□□□ 0.05
C11orf54-209ENST00000530620 TRIM37O94972 964 aa15.35■□□□□ 0.05
C11orf54-209ENST00000530620 EVA1CP58658 441 aa15.35■□□□□ 0.05
C11orf54-209ENST00000530620 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
C11orf54-209ENST00000530620 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
C11orf54-209ENST00000530620 GCP02774 474 aa15.34■□□□□ 0.05
C11orf54-209ENST00000530620 FAM196AQ6ZSG2 479 aa15.34■□□□□ 0.05
C11orf54-209ENST00000530620 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
C11orf54-209ENST00000530620 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
C11orf54-209ENST00000530620 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
C11orf54-209ENST00000530620 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
C11orf54-209ENST00000530620 EZH2Q15910 746 aaKnown RBP15.33■□□□□ 0.04
C11orf54-209ENST00000530620 TCP11L2Q8N4U5 519 aa15.33■□□□□ 0.04
C11orf54-209ENST00000530620 CRB1P82279 1406 aa15.33■□□□□ 0.04
C11orf54-209ENST00000530620 ROCK2O75116 1388 aaKnown RBP15.32■□□□□ 0.04
C11orf54-209ENST00000530620 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
C11orf54-209ENST00000530620 ZBTB7CA1YPR0 619 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 R3HDM1Q15032 1099 aaKnown RBP15.31■□□□□ 0.04
C11orf54-209ENST00000530620 CAMKK2Q96RR4 588 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 LTN1O94822 1766 aa15.31■□□□□ 0.04
C11orf54-209ENST00000530620 NFAT5O94916 1531 aa15.3■□□□□ 0.04
C11orf54-209ENST00000530620 NLRP6P59044 892 aa15.3■□□□□ 0.04
C11orf54-209ENST00000530620 CPSF1Q10570 1443 aaKnown RBP15.3■□□□□ 0.04
C11orf54-209ENST00000530620 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
C11orf54-209ENST00000530620 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
C11orf54-209ENST00000530620 APBA3O96018 575 aa15.29■□□□□ 0.04
C11orf54-209ENST00000530620 THRAP3Q9Y2W1 955 aaKnown RBP15.29■□□□□ 0.04
C11orf54-209ENST00000530620 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
C11orf54-209ENST00000530620 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
C11orf54-209ENST00000530620 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
C11orf54-209ENST00000530620 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.04
C11orf54-209ENST00000530620 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.04
C11orf54-209ENST00000530620 TTC21BQ7Z4L5 1316 aa15.25■□□□□ 0.03
C11orf54-209ENST00000530620 NUBP1P53384 320 aa15.25■□□□□ 0.03
C11orf54-209ENST00000530620 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
C11orf54-209ENST00000530620 ABCC6O95255 1503 aa15.25■□□□□ 0.03
C11orf54-209ENST00000530620 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
C11orf54-209ENST00000530620 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
C11orf54-209ENST00000530620 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
C11orf54-209ENST00000530620 WDR17Q8IZU2 1322 aa15.23■□□□□ 0.03
C11orf54-209ENST00000530620 CD163L1Q9NR16 1453 aa15.23■□□□□ 0.03
C11orf54-209ENST00000530620 SOX12O15370 315 aa15.23■□□□□ 0.03
C11orf54-209ENST00000530620 TOM1L2Q6ZVM7 507 aa15.23■□□□□ 0.03
C11orf54-209ENST00000530620 CASZ1Q86V15 1759 aa15.23■□□□□ 0.03
C11orf54-209ENST00000530620 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
C11orf54-209ENST00000530620 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
C11orf54-209ENST00000530620 DDB1Q16531 1140 aa15.21■□□□□ 0.03
C11orf54-209ENST00000530620 ARHGEF25Q86VW2 580 aa15.21■□□□□ 0.03
C11orf54-209ENST00000530620 NHSQ6T4R5 1651 aa15.21■□□□□ 0.03
C11orf54-209ENST00000530620 KCNH5Q8NCM2 988 aa15.2■□□□□ 0.02
C11orf54-209ENST00000530620 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
C11orf54-209ENST00000530620 EVX2Q03828 476 aa15.18■□□□□ 0.02
C11orf54-209ENST00000530620 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
C11orf54-209ENST00000530620 PTF1AQ7RTS3 328 aa15.18■□□□□ 0.02
C11orf54-209ENST00000530620 FAM208AQ9UK61 1670 aaKnown RBP15.18■□□□□ 0.02
C11orf54-209ENST00000530620 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
C11orf54-209ENST00000530620 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
C11orf54-209ENST00000530620 CSB-PGBD3P0DP91 1061 aa15.17■□□□□ 0.02
C11orf54-209ENST00000530620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.02
C11orf54-209ENST00000530620 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
C11orf54-209ENST00000530620 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
C11orf54-209ENST00000530620 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
C11orf54-209ENST00000530620 BTAF1O14981 1849 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms