RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ARHGEF25Q86VW2 580 aa21.42■■□□□ 1.02
CAPN1-219ENST00000530495 WDR17Q8IZU2 1322 aa21.42■■□□□ 1.02
CAPN1-219ENST00000530495 AKAP12Q02952 1782 aa21.41■■□□□ 1.02
CAPN1-219ENST00000530495 CPSF1Q10570 1443 aaKnown RBP21.4■■□□□ 1.02
CAPN1-219ENST00000530495 CDCA7Q9BWT1 371 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-219ENST00000530495 RGPD3A6NKT7 1758 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-219ENST00000530495 RGPD4Q7Z3J3 1758 aa21.4■■□□□ 1.02
CAPN1-219ENST00000530495 RGPD5Q99666 1765 aa21.4■■□□□ 1.02
CAPN1-219ENST00000530495 ROCK2O75116 1388 aaKnown RBP21.39■■□□□ 1.02
CAPN1-219ENST00000530495 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
CAPN1-219ENST00000530495 BCL11BQ9C0K0 894 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-219ENST00000530495 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.01
CAPN1-219ENST00000530495 MARCH10Q8NA82 808 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-219ENST00000530495 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
CAPN1-219ENST00000530495 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
CAPN1-219ENST00000530495 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
CAPN1-219ENST00000530495 BCL9O00512 1426 aa21.37■■□□□ 1.01
CAPN1-219ENST00000530495 KCNQ2O43526 872 aa21.36■■□□□ 1.01
CAPN1-219ENST00000530495 PTF1AQ7RTS3 328 aa21.36■■□□□ 1.01
CAPN1-219ENST00000530495 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
CAPN1-219ENST00000530495 SOX12O15370 315 aa21.33■■□□□ 1.01
CAPN1-219ENST00000530495 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1.01
CAPN1-219ENST00000530495 PROM2Q8N271 834 aa21.33■■□□□ 1.01
CAPN1-219ENST00000530495 NFAT5O94916 1531 aa21.33■■□□□ 1
CAPN1-219ENST00000530495 EXOC5O00471 708 aa21.32■■□□□ 1
CAPN1-219ENST00000530495 PPP1R1BQ9UD71 204 aaPredicted RBP21.32■■□□□ 1
CAPN1-219ENST00000530495 ABCC6O95255 1503 aa21.3■■□□□ 1
CAPN1-219ENST00000530495 MON2Q7Z3U7 1717 aa21.3■■□□□ 1
CAPN1-219ENST00000530495 ANO8Q9HCE9 1232 aaPredicted RBP21.3■■□□□ 1
CAPN1-219ENST00000530495 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
CAPN1-219ENST00000530495 USP31Q70CQ4 1352 aa21.29■■□□□ 1
CAPN1-219ENST00000530495 CCDC7Q96M83 1385 aa21.29■■□□□ 1
CAPN1-219ENST00000530495 CASZ1Q86V15 1759 aa21.28■■□□□ 1
CAPN1-219ENST00000530495 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
CAPN1-219ENST00000530495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.27■■□□□ 1
CAPN1-219ENST00000530495 USP54Q70EL1 1684 aa21.26■□□□□ 0.99
CAPN1-219ENST00000530495 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
CAPN1-219ENST00000530495 PDGFDQ9GZP0 370 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-219ENST00000530495 CD163L1Q9NR16 1453 aa21.25■□□□□ 0.99
CAPN1-219ENST00000530495 YY1P25490 414 aa21.24■□□□□ 0.99
CAPN1-219ENST00000530495 NME9Q86XW9 330 aa21.24■□□□□ 0.99
CAPN1-219ENST00000530495 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
CAPN1-219ENST00000530495 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
CAPN1-219ENST00000530495 ERBB3P21860 1342 aa21.23■□□□□ 0.99
CAPN1-219ENST00000530495 TNS2Q63HR2 1409 aa21.22■□□□□ 0.99
CAPN1-219ENST00000530495 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
CAPN1-219ENST00000530495 SLC12A5Q9H2X9 1139 aa21.22■□□□□ 0.99
CAPN1-219ENST00000530495 LTN1O94822 1766 aa21.22■□□□□ 0.99
CAPN1-219ENST00000530495 SLC15A2Q16348 729 aa21.21■□□□□ 0.99
CAPN1-219ENST00000530495 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-219ENST00000530495 NLRP2Q9NX02 1062 aa21.21■□□□□ 0.99
CAPN1-219ENST00000530495 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
CAPN1-219ENST00000530495 ZBTB7AO95365 584 aa21.2■□□□□ 0.98
CAPN1-219ENST00000530495 IL2RBP14784 551 aa21.2■□□□□ 0.98
CAPN1-219ENST00000530495 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
CAPN1-219ENST00000530495 NHSQ6T4R5 1651 aa21.19■□□□□ 0.98
CAPN1-219ENST00000530495 PTGER2P43116 358 aa21.19■□□□□ 0.98
CAPN1-219ENST00000530495 ANKRD24Q8TF21 1146 aa21.18■□□□□ 0.98
CAPN1-219ENST00000530495 TERF2IPQ9NYB0 399 aa21.18■□□□□ 0.98
CAPN1-219ENST00000530495 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
CAPN1-219ENST00000530495 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-219ENST00000530495 ACSBG1Q96GR2 724 aa21.16■□□□□ 0.98
CAPN1-219ENST00000530495 A0A1W2PP64 1363 aa21.14■□□□□ 0.98
CAPN1-219ENST00000530495 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
CAPN1-219ENST00000530495 MYOM1P52179 1685 aa21.14■□□□□ 0.97
CAPN1-219ENST00000530495 IP6K1Q92551 441 aa21.13■□□□□ 0.97
CAPN1-219ENST00000530495 BTAF1O14981 1849 aa21.13■□□□□ 0.97
CAPN1-219ENST00000530495 SGIP1Q9BQI5 828 aa21.12■□□□□ 0.97
CAPN1-219ENST00000530495 KAT6BQ8WYB5 2073 aa21.11■□□□□ 0.97
CAPN1-219ENST00000530495 TONSLQ96HA7 1378 aa21.1■□□□□ 0.97
CAPN1-219ENST00000530495 SYT17Q9BSW7 474 aa21.1■□□□□ 0.97
CAPN1-219ENST00000530495 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
CAPN1-219ENST00000530495 TESK2Q96S53 571 aa21.09■□□□□ 0.97
CAPN1-219ENST00000530495 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
CAPN1-219ENST00000530495 FAM208AQ9UK61 1670 aaKnown RBP21.08■□□□□ 0.96
CAPN1-219ENST00000530495 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
CAPN1-219ENST00000530495 LRRC4BQ9NT99 713 aa21.07■□□□□ 0.96
CAPN1-219ENST00000530495 ST20-MTHFSA0A0A6YYL1 179 aa21.06■□□□□ 0.96
CAPN1-219ENST00000530495 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
CAPN1-219ENST00000530495 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
CAPN1-219ENST00000530495 ZNF827Q17R98 1081 aa21.05■□□□□ 0.96
CAPN1-219ENST00000530495 COG3Q96JB2 828 aa21.05■□□□□ 0.96
CAPN1-219ENST00000530495 HOXC9P31274 260 aa21.04■□□□□ 0.96
CAPN1-219ENST00000530495 SLC27A3Q5K4L6 730 aa21.04■□□□□ 0.96
CAPN1-219ENST00000530495 ARXQ96QS3 562 aa21.04■□□□□ 0.96
CAPN1-219ENST00000530495 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
CAPN1-219ENST00000530495 AKT1S1Q96B36 256 aa21.03■□□□□ 0.96
CAPN1-219ENST00000530495 FBLN1P23142 703 aa21.01■□□□□ 0.95
CAPN1-219ENST00000530495 AMPHP49418 695 aa21.01■□□□□ 0.95
CAPN1-219ENST00000530495 QSER1Q2KHR3 1735 aa21.01■□□□□ 0.95
CAPN1-219ENST00000530495 RGPD2P0DJD1 1756 aa21■□□□□ 0.95
CAPN1-219ENST00000530495 MAP3K5Q99683 1374 aa21■□□□□ 0.95
CAPN1-219ENST00000530495 PRIM1P49642 420 aaKnown RBP21■□□□□ 0.95
CAPN1-219ENST00000530495 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
CAPN1-219ENST00000530495 ANKRD36BQ8N2N9 1353 aa20.99■□□□□ 0.95
CAPN1-219ENST00000530495 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
CAPN1-219ENST00000530495 CHD4Q14839 1912 aa20.98■□□□□ 0.95
CAPN1-219ENST00000530495 ZNF784Q8NCA9 323 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-219ENST00000530495 SYTL4Q96C24 671 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-219ENST00000530495 COL24A1Q17RW2 1714 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms