RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 USP47Q96K76 1375 aa15.78■□□□□ 0.12
CTSC-206ENST00000529974 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
CTSC-206ENST00000529974 PUS7Q96PZ0 661 aaKnown RBP15.78■□□□□ 0.12
CTSC-206ENST00000529974 SLC12A5Q9H2X9 1139 aa15.78■□□□□ 0.12
CTSC-206ENST00000529974 RREB1Q92766 1687 aa15.78■□□□□ 0.12
CTSC-206ENST00000529974 NINLQ9Y2I6 1382 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 MYOM1P52179 1685 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 NME9Q86XW9 330 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
CTSC-206ENST00000529974 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
CTSC-206ENST00000529974 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
CTSC-206ENST00000529974 SOX12O15370 315 aa15.76■□□□□ 0.11
CTSC-206ENST00000529974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.11
CTSC-206ENST00000529974 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
CTSC-206ENST00000529974 BAG6P46379 1132 aa15.75■□□□□ 0.11
CTSC-206ENST00000529974 HDGFL2Q7Z4V5 671 aaPredicted RBP15.74■□□□□ 0.11
CTSC-206ENST00000529974 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
CTSC-206ENST00000529974 LRP5O75197 1615 aa15.73■□□□□ 0.11
CTSC-206ENST00000529974 RGPD3A6NKT7 1758 aaPredicted RBP15.73■□□□□ 0.11
CTSC-206ENST00000529974 RGPD4Q7Z3J3 1758 aa15.73■□□□□ 0.11
CTSC-206ENST00000529974 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
CTSC-206ENST00000529974 TERF2IPQ9NYB0 399 aa15.73■□□□□ 0.11
CTSC-206ENST00000529974 OVOS2A0A0G2JMS6 1433 aa15.72■□□□□ 0.11
CTSC-206ENST00000529974 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
CTSC-206ENST00000529974 KIF20BQ96Q89 1820 aa15.71■□□□□ 0.11
CTSC-206ENST00000529974 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
CTSC-206ENST00000529974 TRIM37O94972 964 aa15.71■□□□□ 0.11
CTSC-206ENST00000529974 PDE3BQ13370 1112 aa15.71■□□□□ 0.11
CTSC-206ENST00000529974 TOM1L2Q6ZVM7 507 aa15.71■□□□□ 0.11
CTSC-206ENST00000529974 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.11
CTSC-206ENST00000529974 ERBB3P21860 1342 aa15.69■□□□□ 0.1
CTSC-206ENST00000529974 TNS2Q63HR2 1409 aa15.69■□□□□ 0.1
CTSC-206ENST00000529974 CARD10Q9BWT7 1032 aa15.69■□□□□ 0.1
CTSC-206ENST00000529974 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
CTSC-206ENST00000529974 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
CTSC-206ENST00000529974 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
CTSC-206ENST00000529974 CCDC7Q96M83 1385 aa15.68■□□□□ 0.1
CTSC-206ENST00000529974 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
CTSC-206ENST00000529974 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
CTSC-206ENST00000529974 BCL9O00512 1426 aa15.68■□□□□ 0.1
CTSC-206ENST00000529974 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
CTSC-206ENST00000529974 DDB1Q16531 1140 aa15.67■□□□□ 0.1
CTSC-206ENST00000529974 CSB-PGBD3P0DP91 1061 aa15.66■□□□□ 0.1
CTSC-206ENST00000529974 TMF1P82094 1093 aa15.66■□□□□ 0.1
CTSC-206ENST00000529974 NHSQ6T4R5 1651 aa15.66■□□□□ 0.1
CTSC-206ENST00000529974 RGPD2P0DJD1 1756 aa15.65■□□□□ 0.1
CTSC-206ENST00000529974 PSDA5PKW4 1024 aaPredicted RBP15.65■□□□□ 0.1
CTSC-206ENST00000529974 APBA3O96018 575 aa15.65■□□□□ 0.1
CTSC-206ENST00000529974 MARCH10Q8NA82 808 aaPredicted RBP15.65■□□□□ 0.1
CTSC-206ENST00000529974 CDCA7Q9BWT1 371 aaPredicted RBP15.65■□□□□ 0.1
CTSC-206ENST00000529974 SHANK3Q9BYB0 1731 aa15.63■□□□□ 0.09
CTSC-206ENST00000529974 ANKRD24Q8TF21 1146 aa15.63■□□□□ 0.09
CTSC-206ENST00000529974 C11orf95C9JLR9 678 aaPredicted RBP15.62■□□□□ 0.09
CTSC-206ENST00000529974 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
CTSC-206ENST00000529974 ANKRD26Q9UPS8 1709 aa15.62■□□□□ 0.09
CTSC-206ENST00000529974 MAP3K19Q56UN5 1328 aa15.62■□□□□ 0.09
CTSC-206ENST00000529974 R3HDM1Q15032 1099 aaKnown RBP15.61■□□□□ 0.09
CTSC-206ENST00000529974 IP6K1Q92551 441 aa15.61■□□□□ 0.09
CTSC-206ENST00000529974 COG3Q96JB2 828 aa15.61■□□□□ 0.09
CTSC-206ENST00000529974 RTL1A6NKG5 1358 aa15.61■□□□□ 0.09
CTSC-206ENST00000529974 FBLN1P23142 703 aa15.6■□□□□ 0.09
CTSC-206ENST00000529974 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
CTSC-206ENST00000529974 NSD3Q9BZ95 1437 aa15.6■□□□□ 0.09
CTSC-206ENST00000529974 FYB1O15117 783 aa15.59■□□□□ 0.09
CTSC-206ENST00000529974 CDCA8Q53HL2 280 aa15.59■□□□□ 0.09
CTSC-206ENST00000529974 HOXC9P31274 260 aa15.58■□□□□ 0.08
CTSC-206ENST00000529974 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
CTSC-206ENST00000529974 BTAF1O14981 1849 aa15.58■□□□□ 0.08
CTSC-206ENST00000529974 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
CTSC-206ENST00000529974 IL2RBP14784 551 aa15.57■□□□□ 0.08
CTSC-206ENST00000529974 CARD14Q9BXL6 1004 aa15.57■□□□□ 0.08
CTSC-206ENST00000529974 BCL11BQ9C0K0 894 aaPredicted RBP15.57■□□□□ 0.08
CTSC-206ENST00000529974 MEGF6O75095 1541 aa15.57■□□□□ 0.08
CTSC-206ENST00000529974 EXOC5O00471 708 aa15.56■□□□□ 0.08
CTSC-206ENST00000529974 DOT1LQ8TEK3 1739 aa15.56■□□□□ 0.08
CTSC-206ENST00000529974 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
CTSC-206ENST00000529974 PLSCR1O15162 318 aa15.55■□□□□ 0.08
CTSC-206ENST00000529974 RRS1Q15050 365 aaKnown RBP15.55■□□□□ 0.08
CTSC-206ENST00000529974 CCER1Q8TC90 406 aaPredicted RBP15.55■□□□□ 0.08
CTSC-206ENST00000529974 LTV1Q96GA3 475 aaPredicted RBP15.55■□□□□ 0.08
CTSC-206ENST00000529974 AMPHP49418 695 aa15.53■□□□□ 0.08
CTSC-206ENST00000529974 ANO8Q9HCE9 1232 aaPredicted RBP15.53■□□□□ 0.08
CTSC-206ENST00000529974 FLT4P35916 1363 aa15.52■□□□□ 0.08
CTSC-206ENST00000529974 KCNQ2O43526 872 aa15.52■□□□□ 0.08
CTSC-206ENST00000529974 PROM2Q8N271 834 aa15.52■□□□□ 0.08
CTSC-206ENST00000529974 INSRP06213 1382 aa15.51■□□□□ 0.07
CTSC-206ENST00000529974 KIF24Q5T7B8 1368 aa15.51■□□□□ 0.07
CTSC-206ENST00000529974 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
CTSC-206ENST00000529974 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
CTSC-206ENST00000529974 MAP2P11137 1827 aaKnown RBP15.5■□□□□ 0.07
CTSC-206ENST00000529974 PKD1L3Q7Z443 1732 aa15.5■□□□□ 0.07
CTSC-206ENST00000529974 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
CTSC-206ENST00000529974 EIF4G2P78344 907 aaKnown RBP eCLIP15.49■□□□□ 0.07
CTSC-206ENST00000529974 NBPF14Q5TI25 921 aa15.49■□□□□ 0.07
CTSC-206ENST00000529974 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
CTSC-206ENST00000529974 ACSBG1Q96GR2 724 aa15.49■□□□□ 0.07
CTSC-206ENST00000529974 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
CTSC-206ENST00000529974 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms