RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ZBTB33Q86T24 672 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 ADAM32Q8TC27 787 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 ZFP42Q96MM3 310 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 CARD14Q9BXL6 1004 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 ZFAND3Q9H8U3 227 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 EMILIN1Q9Y6C2 1016 aa7.6□□□□□ -1.19
CTR9-205ENST00000529898 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
CTR9-205ENST00000529898 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
CTR9-205ENST00000529898 SLC10A4Q96EP9 437 aa7.58□□□□□ -1.2
CTR9-205ENST00000529898 KCTD15Q96SI1 283 aaPredicted RBP7.58□□□□□ -1.2
CTR9-205ENST00000529898 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
CTR9-205ENST00000529898 SCARF1Q14162 830 aa7.57□□□□□ -1.2
CTR9-205ENST00000529898 Q6ZVU0 165 aa7.57□□□□□ -1.2
CTR9-205ENST00000529898 NPAS3Q8IXF0 933 aa7.57□□□□□ -1.2
CTR9-205ENST00000529898 ESPNB1AK53 854 aa7.56□□□□□ -1.2
CTR9-205ENST00000529898 WFS1O76024 890 aa7.56□□□□□ -1.2
CTR9-205ENST00000529898 DHX9Q08211 1270 aaKnown RBP7.56□□□□□ -1.2
CTR9-205ENST00000529898 PPP1R26Q5T8A7 1209 aaPredicted RBP7.56□□□□□ -1.2
CTR9-205ENST00000529898 GPR37L1O60883 481 aa7.55□□□□□ -1.2
CTR9-205ENST00000529898 INTS6LQ5JSJ4 861 aaKnown RBP7.55□□□□□ -1.2
CTR9-205ENST00000529898 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
CTR9-205ENST00000529898 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CTR9-205ENST00000529898 PGPEP1Q9NXJ5 209 aa7.55□□□□□ -1.2
CTR9-205ENST00000529898 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
CTR9-205ENST00000529898 ZBBXA8MT70 800 aa7.54□□□□□ -1.2
CTR9-205ENST00000529898 WIPF1O43516 503 aa7.54□□□□□ -1.2
CTR9-205ENST00000529898 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
CTR9-205ENST00000529898 LINC00528Q8N1L1 170 aa7.54□□□□□ -1.2
CTR9-205ENST00000529898 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
CTR9-205ENST00000529898 TSEN34Q9BSV6 310 aaKnown RBP7.54□□□□□ -1.2
CTR9-205ENST00000529898 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
CTR9-205ENST00000529898 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.21
CTR9-205ENST00000529898 UPP2O95045 317 aa7.51□□□□□ -1.21
CTR9-205ENST00000529898 FBXO45P0C2W1 286 aa7.51□□□□□ -1.21
CTR9-205ENST00000529898 PRKCSHP14314 528 aaPredicted RBP7.51□□□□□ -1.21
CTR9-205ENST00000529898 MCCD1P59942 119 aaPredicted RBP7.51□□□□□ -1.21
CTR9-205ENST00000529898 DZIP3Q86Y13 1208 aaKnown RBP7.51□□□□□ -1.21
CTR9-205ENST00000529898 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
CTR9-205ENST00000529898 SNRKQ9NRH2 765 aa7.51□□□□□ -1.21
CTR9-205ENST00000529898 H3BM21 787 aa7.5□□□□□ -1.21
CTR9-205ENST00000529898 APBB1O00213 710 aa7.5□□□□□ -1.21
CTR9-205ENST00000529898 SPINT1O43278 529 aa7.5□□□□□ -1.21
CTR9-205ENST00000529898 CBLBQ13191 982 aa7.5□□□□□ -1.21
CTR9-205ENST00000529898 LILRA1O75019 489 aa7.49□□□□□ -1.21
CTR9-205ENST00000529898 BMP2P12643 396 aa7.49□□□□□ -1.21
CTR9-205ENST00000529898 NR1H3Q13133 447 aa7.49□□□□□ -1.21
CTR9-205ENST00000529898 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
CTR9-205ENST00000529898 NDUFB9Q9Y6M9 179 aa7.49□□□□□ -1.21
CTR9-205ENST00000529898 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
CTR9-205ENST00000529898 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
CTR9-205ENST00000529898 VSIG8P0DPA2 414 aa7.47□□□□□ -1.21
CTR9-205ENST00000529898 KDF1Q8NAX2 398 aaPredicted RBP7.47□□□□□ -1.21
CTR9-205ENST00000529898 ZNF592Q92610 1267 aa7.47□□□□□ -1.21
CTR9-205ENST00000529898 TMPRSS4Q9NRS4 437 aa7.47□□□□□ -1.21
CTR9-205ENST00000529898 DNMT3LQ9UJW3 386 aa7.47□□□□□ -1.21
CTR9-205ENST00000529898 SOBPA7XYQ1 873 aa7.46□□□□□ -1.22
CTR9-205ENST00000529898 MAN1A2O60476 641 aa7.46□□□□□ -1.22
CTR9-205ENST00000529898 ADD1P35611 737 aaKnown RBP7.46□□□□□ -1.22
CTR9-205ENST00000529898 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
CTR9-205ENST00000529898 TRIM52Q96A61 297 aa7.46□□□□□ -1.22
CTR9-205ENST00000529898 TTLL8A6PVC2 850 aa7.45□□□□□ -1.22
CTR9-205ENST00000529898 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
CTR9-205ENST00000529898 IRF7Q92985 503 aa7.45□□□□□ -1.22
CTR9-205ENST00000529898 ADH1AP07327 375 aa7.44□□□□□ -1.22
CTR9-205ENST00000529898 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.22
CTR9-205ENST00000529898 PCDHB9Q9Y5E1 797 aa7.44□□□□□ -1.22
CTR9-205ENST00000529898 PTGIRP43119 386 aa7.43□□□□□ -1.22
CTR9-205ENST00000529898 RNF20Q5VTR2 975 aa7.43□□□□□ -1.22
CTR9-205ENST00000529898 ZNF330Q9Y3S2 320 aaPredicted RBP7.43□□□□□ -1.22
CTR9-205ENST00000529898 ERBB4Q15303 1308 aa7.43□□□□□ -1.22
CTR9-205ENST00000529898 PPFIA3O75145 1194 aa7.42□□□□□ -1.22
CTR9-205ENST00000529898 ERVK-9P63128 1117 aa7.42□□□□□ -1.22
CTR9-205ENST00000529898 INSM1Q01101 510 aaPredicted RBP7.42□□□□□ -1.22
CTR9-205ENST00000529898 AGBL1Q96MI9 1066 aa7.42□□□□□ -1.22
CTR9-205ENST00000529898 GMPRP36959 345 aa7.41□□□□□ -1.22
CTR9-205ENST00000529898 CTSOP43234 321 aaPredicted RBP7.41□□□□□ -1.22
CTR9-205ENST00000529898 VEGFBP49765 207 aa7.41□□□□□ -1.22
CTR9-205ENST00000529898 IRF5Q13568 498 aa7.41□□□□□ -1.22
CTR9-205ENST00000529898 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
CTR9-205ENST00000529898 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
CTR9-205ENST00000529898 RAB15P59190 212 aa7.4□□□□□ -1.22
CTR9-205ENST00000529898 RELBQ01201 579 aa7.4□□□□□ -1.22
CTR9-205ENST00000529898 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
CTR9-205ENST00000529898 PRM3Q9NNZ6 103 aa7.4□□□□□ -1.22
CTR9-205ENST00000529898 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
CTR9-205ENST00000529898 PTSQ03393 145 aa7.39□□□□□ -1.23
CTR9-205ENST00000529898 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
CTR9-205ENST00000529898 RNF217Q8TC41 542 aa7.39□□□□□ -1.23
CTR9-205ENST00000529898 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
CTR9-205ENST00000529898 FIGNL2A6NMB9 653 aa7.38□□□□□ -1.23
CTR9-205ENST00000529898 TRAK2O60296 914 aa7.38□□□□□ -1.23
CTR9-205ENST00000529898 RNF144AP50876 292 aaPredicted RBP7.38□□□□□ -1.23
CTR9-205ENST00000529898 FOXD4L5Q5VV16 416 aaPredicted RBP7.38□□□□□ -1.23
CTR9-205ENST00000529898 PHTF2Q8N3S3 785 aa7.38□□□□□ -1.23
CTR9-205ENST00000529898 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
CTR9-205ENST00000529898 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
CTR9-205ENST00000529898 CYLDQ9NQC7 956 aa7.38□□□□□ -1.23
CTR9-205ENST00000529898 CHIC2Q9UKJ5 165 aa7.38□□□□□ -1.23
CTR9-205ENST00000529898 MCM6Q14566 821 aa7.37□□□□□ -1.23
CTR9-205ENST00000529898 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms