RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
SOX6-212ENST00000529469 TTC24A2A3L6 582 aaPredicted RBP8.86□□□□□ -0.99
SOX6-212ENST00000529469 GRM5P41594 1212 aa8.86□□□□□ -0.99
SOX6-212ENST00000529469 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
SOX6-212ENST00000529469 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
SOX6-212ENST00000529469 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
SOX6-212ENST00000529469 GIGYF1O75420 1035 aaPredicted RBP8.85□□□□□ -0.99
SOX6-212ENST00000529469 NR3C2P08235 984 aa8.85□□□□□ -0.99
SOX6-212ENST00000529469 SMPD1P17405 629 aa8.85□□□□□ -0.99
SOX6-212ENST00000529469 ESPNB1AK53 854 aa8.84□□□□□ -0.99
SOX6-212ENST00000529469 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
SOX6-212ENST00000529469 ZNF592Q92610 1267 aa8.84□□□□□ -0.99
SOX6-212ENST00000529469 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
SOX6-212ENST00000529469 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
SOX6-212ENST00000529469 GFRA3O60609 400 aa8.83□□□□□ -1
SOX6-212ENST00000529469 RAB15P59190 212 aa8.83□□□□□ -1
SOX6-212ENST00000529469 NNTQ13423 1086 aa8.83□□□□□ -1
SOX6-212ENST00000529469 INTS6LQ5JSJ4 861 aaKnown RBP8.83□□□□□ -1
SOX6-212ENST00000529469 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
SOX6-212ENST00000529469 UCN2Q96RP3 112 aa8.83□□□□□ -1
SOX6-212ENST00000529469 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
SOX6-212ENST00000529469 SUPT5HO00267 1087 aaKnown RBP8.82□□□□□ -1
SOX6-212ENST00000529469 PIK3CDO00329 1044 aa8.82□□□□□ -1
SOX6-212ENST00000529469 NR5A1Q13285 461 aa8.81□□□□□ -1
SOX6-212ENST00000529469 FAM187AA6NFU0 413 aa8.8□□□□□ -1
SOX6-212ENST00000529469 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
SOX6-212ENST00000529469 SLFNL1Q499Z3 407 aa8.8□□□□□ -1
SOX6-212ENST00000529469 PHTF2Q8N3S3 785 aa8.8□□□□□ -1
SOX6-212ENST00000529469 HPS1Q92902 700 aa8.8□□□□□ -1
SOX6-212ENST00000529469 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
SOX6-212ENST00000529469 RNF135Q8IUD6 432 aa8.79□□□□□ -1
SOX6-212ENST00000529469 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
SOX6-212ENST00000529469 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
SOX6-212ENST00000529469 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
SOX6-212ENST00000529469 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
SOX6-212ENST00000529469 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
SOX6-212ENST00000529469 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
SOX6-212ENST00000529469 TMPRSS4Q9NRS4 437 aa8.78□□□□□ -1
SOX6-212ENST00000529469 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
SOX6-212ENST00000529469 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
SOX6-212ENST00000529469 TBC1D9Q6ZT07 1266 aa8.76□□□□□ -1.01
SOX6-212ENST00000529469 KLF16Q9BXK1 252 aaPredicted RBP8.76□□□□□ -1.01
SOX6-212ENST00000529469 CHIC2Q9UKJ5 165 aa8.76□□□□□ -1.01
SOX6-212ENST00000529469 SKIP12755 728 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 TIMP2P16035 220 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
SOX6-212ENST00000529469 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 PKDCCQ504Y2 493 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 TRAF7Q6Q0C0 670 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 CCDC82Q8N4S0 544 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 ZNF784Q8NCA9 323 aaPredicted RBP8.75□□□□□ -1.01
SOX6-212ENST00000529469 ITPKCQ96DU7 683 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
SOX6-212ENST00000529469 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
SOX6-212ENST00000529469 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
SOX6-212ENST00000529469 AVPP01185 164 aa8.74□□□□□ -1.01
SOX6-212ENST00000529469 SCTRP47872 440 aa8.74□□□□□ -1.01
SOX6-212ENST00000529469 WDR4P57081 412 aaKnown RBP8.74□□□□□ -1.01
SOX6-212ENST00000529469 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
SOX6-212ENST00000529469 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
SOX6-212ENST00000529469 EMILIN1Q9Y6C2 1016 aa8.74□□□□□ -1.01
SOX6-212ENST00000529469 PALM3A6NDB9 673 aaPredicted RBP8.73□□□□□ -1.01
SOX6-212ENST00000529469 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
SOX6-212ENST00000529469 ATP9BO43861 1147 aa8.73□□□□□ -1.01
SOX6-212ENST00000529469 DGAT1O75907 488 aa8.73□□□□□ -1.01
SOX6-212ENST00000529469 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
SOX6-212ENST00000529469 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
SOX6-212ENST00000529469 LILRA1O75019 489 aa8.72□□□□□ -1.01
SOX6-212ENST00000529469 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
SOX6-212ENST00000529469 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
SOX6-212ENST00000529469 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
SOX6-212ENST00000529469 CCDC97Q96F63 343 aaPredicted RBP8.72□□□□□ -1.01
SOX6-212ENST00000529469 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
SOX6-212ENST00000529469 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
SOX6-212ENST00000529469 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 ERVK-9P63128 1117 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 NCOA4Q13772 614 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 MAP7D1Q3KQU3 841 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 CCDC125Q86Z20 511 aa8.71□□□□□ -1.02
SOX6-212ENST00000529469 CBLBQ13191 982 aa8.7□□□□□ -1.02
SOX6-212ENST00000529469 SERPINA10Q9UK55 444 aa8.7□□□□□ -1.02
SOX6-212ENST00000529469 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
SOX6-212ENST00000529469 CAPN5O15484 640 aaPredicted RBP8.69□□□□□ -1.02
SOX6-212ENST00000529469 ADD1P35611 737 aaKnown RBP8.69□□□□□ -1.02
SOX6-212ENST00000529469 MYT1Q01538 1121 aa8.69□□□□□ -1.02
SOX6-212ENST00000529469 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
SOX6-212ENST00000529469 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
SOX6-212ENST00000529469 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
SOX6-212ENST00000529469 CRIPAKQ8N1N5 446 aa8.68□□□□□ -1.02
SOX6-212ENST00000529469 LCE2BO14633 110 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
SOX6-212ENST00000529469 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 EML3Q32P44 896 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 Q6ZNB5 142 aa8.67□□□□□ -1.02
SOX6-212ENST00000529469 MEIOBQ8N635 442 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms