RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 PHTF2Q8N3S3 785 aa9.73□□□□□ -0.85
NUP98-216ENST00000529379 MPNDQ8N594 471 aa9.73□□□□□ -0.85
NUP98-216ENST00000529379 CCDC97Q96F63 343 aaPredicted RBP9.73□□□□□ -0.85
NUP98-216ENST00000529379 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
NUP98-216ENST00000529379 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
NUP98-216ENST00000529379 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
NUP98-216ENST00000529379 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
NUP98-216ENST00000529379 ESPNB1AK53 854 aa9.72□□□□□ -0.85
NUP98-216ENST00000529379 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
NUP98-216ENST00000529379 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
NUP98-216ENST00000529379 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
NUP98-216ENST00000529379 NRG2O14511 850 aaPredicted RBP9.71□□□□□ -0.86
NUP98-216ENST00000529379 GRM5P41594 1212 aa9.71□□□□□ -0.86
NUP98-216ENST00000529379 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
NUP98-216ENST00000529379 PPP1R12CQ9BZL4 782 aa9.71□□□□□ -0.86
NUP98-216ENST00000529379 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
NUP98-216ENST00000529379 PRR20EP86478 221 aa9.7□□□□□ -0.86
NUP98-216ENST00000529379 PRR20CP86479 221 aa9.7□□□□□ -0.86
NUP98-216ENST00000529379 PRR20DP86480 221 aa9.7□□□□□ -0.86
NUP98-216ENST00000529379 PRR20BP86481 221 aa9.7□□□□□ -0.86
NUP98-216ENST00000529379 PRR20AP86496 221 aa9.7□□□□□ -0.86
NUP98-216ENST00000529379 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
NUP98-216ENST00000529379 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
NUP98-216ENST00000529379 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
NUP98-216ENST00000529379 RNF135Q8IUD6 432 aa9.69□□□□□ -0.86
NUP98-216ENST00000529379 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
NUP98-216ENST00000529379 ATP9BO43861 1147 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 ADH1CP00326 375 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 SKIP12755 728 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 FSHRP23945 695 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 RAB15P59190 212 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 LAPTM4AQ15012 233 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 SNIP1Q8TAD8 396 aaKnown RBP9.68□□□□□ -0.86
NUP98-216ENST00000529379 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
NUP98-216ENST00000529379 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
NUP98-216ENST00000529379 PLPP7Q8NBV4 271 aa9.67□□□□□ -0.86
NUP98-216ENST00000529379 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
NUP98-216ENST00000529379 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
NUP98-216ENST00000529379 J3QL48 77 aa9.66□□□□□ -0.86
NUP98-216ENST00000529379 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
NUP98-216ENST00000529379 TRAF7Q6Q0C0 670 aa9.66□□□□□ -0.86
NUP98-216ENST00000529379 Q6ZNB5 142 aa9.66□□□□□ -0.86
NUP98-216ENST00000529379 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
NUP98-216ENST00000529379 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
NUP98-216ENST00000529379 TTC24A2A3L6 582 aaPredicted RBP9.65□□□□□ -0.86
NUP98-216ENST00000529379 NR3C2P08235 984 aa9.65□□□□□ -0.86
NUP98-216ENST00000529379 RFX1P22670 979 aa9.65□□□□□ -0.86
NUP98-216ENST00000529379 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
NUP98-216ENST00000529379 NR5A1Q13285 461 aa9.65□□□□□ -0.86
NUP98-216ENST00000529379 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
NUP98-216ENST00000529379 ERVH48-1M5A8F1 160 aa9.64□□□□□ -0.87
NUP98-216ENST00000529379 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
NUP98-216ENST00000529379 SMPD1P17405 629 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 NNTQ13423 1086 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 MAP7D1Q3KQU3 841 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 CCDC116Q8IYX3 515 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 DEPDC4Q8N2C3 294 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 TMPRSS4Q9NRS4 437 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 DOLKQ9UPQ8 538 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 WASF2Q9Y6W5 498 aa9.63□□□□□ -0.87
NUP98-216ENST00000529379 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 NCOA4Q13772 614 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 USP17L2Q6R6M4 530 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 PLEKHM2Q8IWE5 1019 aa9.62□□□□□ -0.87
NUP98-216ENST00000529379 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
NUP98-216ENST00000529379 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
NUP98-216ENST00000529379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
NUP98-216ENST00000529379 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
NUP98-216ENST00000529379 DHX9Q08211 1270 aaKnown RBP9.6□□□□□ -0.87
NUP98-216ENST00000529379 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
NUP98-216ENST00000529379 LZTS3O60299 673 aaPredicted RBP9.59□□□□□ -0.87
NUP98-216ENST00000529379 SCTRP47872 440 aa9.59□□□□□ -0.87
NUP98-216ENST00000529379 EML3Q32P44 896 aa9.59□□□□□ -0.87
NUP98-216ENST00000529379 KANK4Q5T7N3 995 aaPredicted RBP9.59□□□□□ -0.87
NUP98-216ENST00000529379 ZNF784Q8NCA9 323 aaPredicted RBP9.59□□□□□ -0.87
NUP98-216ENST00000529379 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
NUP98-216ENST00000529379 HPS1Q92902 700 aa9.58□□□□□ -0.88
NUP98-216ENST00000529379 MYT1Q01538 1121 aa9.57□□□□□ -0.88
NUP98-216ENST00000529379 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
NUP98-216ENST00000529379 KLF16Q9BXK1 252 aaPredicted RBP9.57□□□□□ -0.88
NUP98-216ENST00000529379 CYLDQ9NQC7 956 aa9.57□□□□□ -0.88
NUP98-216ENST00000529379 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
NUP98-216ENST00000529379 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
NUP98-216ENST00000529379 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
NUP98-216ENST00000529379 LILRA1O75019 489 aa9.56□□□□□ -0.88
NUP98-216ENST00000529379 DGAT1O75907 488 aa9.56□□□□□ -0.88
NUP98-216ENST00000529379 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
NUP98-216ENST00000529379 ITPKCQ96DU7 683 aa9.56□□□□□ -0.88
NUP98-216ENST00000529379 USP4Q13107 963 aa9.55□□□□□ -0.88
NUP98-216ENST00000529379 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
NUP98-216ENST00000529379 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
NUP98-216ENST00000529379 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
NUP98-216ENST00000529379 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
NUP98-216ENST00000529379 ZIC2O95409 532 aaPredicted RBP9.54□□□□□ -0.88
NUP98-216ENST00000529379 TIMP2P16035 220 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms