RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
ATPAF1-209ENST00000529214 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
ATPAF1-209ENST00000529214 ARHGEF10O15013 1369 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 CCDC9Q9Y3X0 531 aaKnown RBP8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 TNS3Q68CZ2 1445 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 ITSN1Q15811 1721 aa8.68□□□□□ -1.02
ATPAF1-209ENST00000529214 SHPRHQ149N8 1683 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 TOPAZ1Q8N9V7 1692 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 USP6P35125 1406 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 SSH2Q76I76 1423 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 HDGFL2Q7Z4V5 671 aaPredicted RBP8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 CABLES1Q8TDN4 633 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
ATPAF1-209ENST00000529214 NINLQ9Y2I6 1382 aa8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 ADAMTS2O95450 1211 aa8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 ZMYND15Q9H091 742 aa8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 RGS17Q9UGC6 210 aaPredicted RBP8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
ATPAF1-209ENST00000529214 LRP6O75581 1613 aa8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 NUTM2GQ5VZR2 741 aa8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 CD163L1Q9NR16 1453 aa8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.02
ATPAF1-209ENST00000529214 TRPM3Q9HCF6 1732 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 NLRP6P59044 892 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 NGLY1Q96IV0 654 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 A0A1W2PP64 1363 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 COL22A1Q8NFW1 1626 aaPredicted RBP8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 C8orf37Q96NL8 207 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
ATPAF1-209ENST00000529214 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 FAM83GA6ND36 823 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 GCP02774 474 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
ATPAF1-209ENST00000529214 NEFLP07196 543 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 ZNF772Q68DY9 489 aaPredicted RBP8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 NME9Q86XW9 330 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 ARID3AQ99856 593 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 USP19O94966 1318 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 AFF2P51816 1311 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 KIF7Q2M1P5 1343 aa8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
ATPAF1-209ENST00000529214 ZBTB7CA1YPR0 619 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 FYB1O15117 783 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 POTEAQ6S8J7 498 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 PKNOX2Q96KN3 472 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 PANK3Q9H999 370 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 USP21Q9UK80 565 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
ATPAF1-209ENST00000529214 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
ATPAF1-209ENST00000529214 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-209ENST00000529214 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-209ENST00000529214 AKAP12Q02952 1782 aa8.6□□□□□ -1.03
ATPAF1-209ENST00000529214 WASHC2AQ641Q2 1341 aa8.59□□□□□ -1.03
ATPAF1-209ENST00000529214 PDE4CQ08493 712 aa8.59□□□□□ -1.03
ATPAF1-209ENST00000529214 UNC5CLQ8IV45 518 aa8.59□□□□□ -1.03
ATPAF1-209ENST00000529214 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
ATPAF1-209ENST00000529214 MON2Q7Z3U7 1717 aa8.59□□□□□ -1.03
ATPAF1-209ENST00000529214 BCL9LQ86UU0 1499 aa8.59□□□□□ -1.04
ATPAF1-209ENST00000529214 CPDO75976 1380 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 ARHGEF25Q86VW2 580 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 COG3Q96JB2 828 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 BTG4Q9NY30 223 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 TRPC5Q9UL62 973 aaPredicted RBP8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 SLIT2O94813 1529 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 CCDC7Q96M83 1385 aa8.58□□□□□ -1.04
ATPAF1-209ENST00000529214 CHRNA2Q15822 529 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 GGNBP2Q9H3C7 697 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 PIK3C2AO00443 1686 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 SOX12O15370 315 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 RXRBP28702 533 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
ATPAF1-209ENST00000529214 SLIT3O75094 1523 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 CRYBG1Q9Y4K1 1723 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 CGNL1Q0VF96 1302 aa8.56□□□□□ -1.04
ATPAF1-209ENST00000529214 FBLN1P23142 703 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms