RNA–Protein interactions for RNA: ENST00000529207.5

SYVN1-211, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-211ENST00000529207 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
SYVN1-211ENST00000529207 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
SYVN1-211ENST00000529207 TOM1L2Q6ZVM7 507 aa13.25□□□□□ -0.29
SYVN1-211ENST00000529207 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
SYVN1-211ENST00000529207 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
SYVN1-211ENST00000529207 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
SYVN1-211ENST00000529207 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
SYVN1-211ENST00000529207 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-211ENST00000529207 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-211ENST00000529207 COL18A1P39060 1754 aa13.24□□□□□ -0.29
SYVN1-211ENST00000529207 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
SYVN1-211ENST00000529207 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
SYVN1-211ENST00000529207 DDB1Q16531 1140 aa13.23□□□□□ -0.29
SYVN1-211ENST00000529207 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
SYVN1-211ENST00000529207 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
SYVN1-211ENST00000529207 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
SYVN1-211ENST00000529207 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
SYVN1-211ENST00000529207 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
SYVN1-211ENST00000529207 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
SYVN1-211ENST00000529207 SBF2Q86WG5 1849 aa13.22□□□□□ -0.29
SYVN1-211ENST00000529207 SOX12O15370 315 aa13.21□□□□□ -0.29
SYVN1-211ENST00000529207 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
SYVN1-211ENST00000529207 CDCA7Q9BWT1 371 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-211ENST00000529207 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.3
SYVN1-211ENST00000529207 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
SYVN1-211ENST00000529207 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
SYVN1-211ENST00000529207 NFAT5O94916 1531 aa13.2□□□□□ -0.3
SYVN1-211ENST00000529207 ABCC6O95255 1503 aa13.2□□□□□ -0.3
SYVN1-211ENST00000529207 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
SYVN1-211ENST00000529207 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
SYVN1-211ENST00000529207 CARD10Q9BWT7 1032 aa13.18□□□□□ -0.3
SYVN1-211ENST00000529207 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
SYVN1-211ENST00000529207 BCL9O00512 1426 aa13.17□□□□□ -0.3
SYVN1-211ENST00000529207 PLSCR1O15162 318 aa13.17□□□□□ -0.3
SYVN1-211ENST00000529207 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
SYVN1-211ENST00000529207 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
SYVN1-211ENST00000529207 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
SYVN1-211ENST00000529207 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
SYVN1-211ENST00000529207 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
SYVN1-211ENST00000529207 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-211ENST00000529207 GPR162Q16538 588 aa13.16□□□□□ -0.3
SYVN1-211ENST00000529207 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
SYVN1-211ENST00000529207 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-211ENST00000529207 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
SYVN1-211ENST00000529207 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-211ENST00000529207 STK32BQ9NY57 414 aa13.16□□□□□ -0.3
SYVN1-211ENST00000529207 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
SYVN1-211ENST00000529207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYVN1-211ENST00000529207 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
SYVN1-211ENST00000529207 LTN1O94822 1766 aa13.15□□□□□ -0.31
SYVN1-211ENST00000529207 EXOC5O00471 708 aa13.14□□□□□ -0.31
SYVN1-211ENST00000529207 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
SYVN1-211ENST00000529207 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
SYVN1-211ENST00000529207 PTF1AQ7RTS3 328 aa13.13□□□□□ -0.31
SYVN1-211ENST00000529207 HDGFL2Q7Z4V5 671 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-211ENST00000529207 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
SYVN1-211ENST00000529207 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
SYVN1-211ENST00000529207 CD163L1Q9NR16 1453 aa13.12□□□□□ -0.31
SYVN1-211ENST00000529207 PTGER2P43116 358 aa13.12□□□□□ -0.31
SYVN1-211ENST00000529207 NME9Q86XW9 330 aa13.12□□□□□ -0.31
SYVN1-211ENST00000529207 EDC4Q6P2E9 1401 aaKnown RBP13.12□□□□□ -0.31
SYVN1-211ENST00000529207 ERBB3P21860 1342 aa13.12□□□□□ -0.31
SYVN1-211ENST00000529207 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
SYVN1-211ENST00000529207 NLRP2Q9NX02 1062 aa13.11□□□□□ -0.31
SYVN1-211ENST00000529207 TERF2IPQ9NYB0 399 aa13.11□□□□□ -0.31
SYVN1-211ENST00000529207 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
SYVN1-211ENST00000529207 PROM2Q8N271 834 aa13.09□□□□□ -0.31
SYVN1-211ENST00000529207 ARXQ96QS3 562 aa13.09□□□□□ -0.31
SYVN1-211ENST00000529207 MYOM1P52179 1685 aa13.08□□□□□ -0.31
SYVN1-211ENST00000529207 A0A1W2PP64 1363 aa13.08□□□□□ -0.31
SYVN1-211ENST00000529207 IL2RBP14784 551 aa13.08□□□□□ -0.32
SYVN1-211ENST00000529207 SLC15A2Q16348 729 aa13.08□□□□□ -0.32
SYVN1-211ENST00000529207 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
SYVN1-211ENST00000529207 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
SYVN1-211ENST00000529207 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
SYVN1-211ENST00000529207 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
SYVN1-211ENST00000529207 BTAF1O14981 1849 aa13.06□□□□□ -0.32
SYVN1-211ENST00000529207 ACSBG1Q96GR2 724 aa13.06□□□□□ -0.32
SYVN1-211ENST00000529207 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
SYVN1-211ENST00000529207 PAPPAQ13219 1627 aa13.04□□□□□ -0.32
SYVN1-211ENST00000529207 SLC24A1O60721 1099 aa13.02□□□□□ -0.33
SYVN1-211ENST00000529207 IP6K1Q92551 441 aa13.02□□□□□ -0.33
SYVN1-211ENST00000529207 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.33
SYVN1-211ENST00000529207 COG3Q96JB2 828 aa13.02□□□□□ -0.33
SYVN1-211ENST00000529207 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
SYVN1-211ENST00000529207 POLD1P28340 1107 aa13.01□□□□□ -0.33
SYVN1-211ENST00000529207 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
SYVN1-211ENST00000529207 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
SYVN1-211ENST00000529207 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
SYVN1-211ENST00000529207 AMPHP49418 695 aa13□□□□□ -0.33
SYVN1-211ENST00000529207 TESK2Q96S53 571 aa13□□□□□ -0.33
SYVN1-211ENST00000529207 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
SYVN1-211ENST00000529207 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
SYVN1-211ENST00000529207 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
SYVN1-211ENST00000529207 HOXC9P31274 260 aa12.98□□□□□ -0.33
SYVN1-211ENST00000529207 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
SYVN1-211ENST00000529207 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
SYVN1-211ENST00000529207 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-211ENST00000529207 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
SYVN1-211ENST00000529207 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms