RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 SHPRHQ149N8 1683 aa10.46□□□□□ -0.74
ITGB1-218ENST00000528877 ADGRF5Q8IZF2 1346 aa10.44□□□□□ -0.74
ITGB1-218ENST00000528877 NUDT7P0C024 238 aa10.44□□□□□ -0.74
ITGB1-218ENST00000528877 ATF3P18847 181 aa10.44□□□□□ -0.74
ITGB1-218ENST00000528877 LRPPRCP42704 1394 aaKnown RBP10.43□□□□□ -0.74
ITGB1-218ENST00000528877 JCADQ9P266 1359 aa10.43□□□□□ -0.74
ITGB1-218ENST00000528877 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
ITGB1-218ENST00000528877 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
ITGB1-218ENST00000528877 WDR70Q9NW82 654 aa10.43□□□□□ -0.74
ITGB1-218ENST00000528877 C1orf167Q5SNV9 1468 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 ABCC11Q96J66 1382 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 ADGRB1O14514 1584 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 DLC1Q96QB1 1528 aa10.42□□□□□ -0.74
ITGB1-218ENST00000528877 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
ITGB1-218ENST00000528877 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.744e-6■■□□□ 14.1
ITGB1-218ENST00000528877 YTHDC2Q9H6S0 1430 aaKnown RBP10.41□□□□□ -0.74
ITGB1-218ENST00000528877 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
ITGB1-218ENST00000528877 LRP6O75581 1613 aa10.4□□□□□ -0.75
ITGB1-218ENST00000528877 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
ITGB1-218ENST00000528877 SPATA31A6Q5VVP1 1343 aa10.39□□□□□ -0.75
ITGB1-218ENST00000528877 RGL3Q3MIN7 710 aa10.39□□□□□ -0.75
ITGB1-218ENST00000528877 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
ITGB1-218ENST00000528877 FMN2Q9NZ56 1722 aa10.38□□□□□ -0.75
ITGB1-218ENST00000528877 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
ITGB1-218ENST00000528877 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
ITGB1-218ENST00000528877 C14orf93Q9H972 538 aaKnown RBP10.38□□□□□ -0.75
ITGB1-218ENST00000528877 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
ITGB1-218ENST00000528877 SIRT1Q96EB6 747 aa10.37□□□□□ -0.75
ITGB1-218ENST00000528877 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
ITGB1-218ENST00000528877 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
ITGB1-218ENST00000528877 PBX2P40425 430 aa10.36□□□□□ -0.75
ITGB1-218ENST00000528877 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
ITGB1-218ENST00000528877 PXDNQ92626 1479 aa10.36□□□□□ -0.75
ITGB1-218ENST00000528877 KIAA1210Q9ULL0 1709 aa10.36□□□□□ -0.75
ITGB1-218ENST00000528877 E2F4Q16254 413 aa10.35□□□□□ -0.75
ITGB1-218ENST00000528877 RGS17Q9UGC6 210 aaPredicted RBP10.35□□□□□ -0.75
ITGB1-218ENST00000528877 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
ITGB1-218ENST00000528877 PLEKHH1Q9ULM0 1364 aa10.35□□□□□ -0.75
ITGB1-218ENST00000528877 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
ITGB1-218ENST00000528877 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
ITGB1-218ENST00000528877 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
ITGB1-218ENST00000528877 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
ITGB1-218ENST00000528877 EVI5O60447 810 aa10.33□□□□□ -0.76
ITGB1-218ENST00000528877 PTGER2P43116 358 aa10.33□□□□□ -0.76
ITGB1-218ENST00000528877 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
ITGB1-218ENST00000528877 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
ITGB1-218ENST00000528877 ANKARQ7Z5J8 1434 aa10.33□□□□□ -0.76
ITGB1-218ENST00000528877 CFAP70Q5T0N1 1121 aa10.32□□□□□ -0.76
ITGB1-218ENST00000528877 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
ITGB1-218ENST00000528877 LRRC59Q96AG4 307 aaKnown RBP10.32□□□□□ -0.76
ITGB1-218ENST00000528877 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
ITGB1-218ENST00000528877 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
ITGB1-218ENST00000528877 NPHP3Q7Z494 1330 aa10.31□□□□□ -0.76
ITGB1-218ENST00000528877 WAPLQ7Z5K2 1190 aa10.3□□□□□ -0.76
ITGB1-218ENST00000528877 ORAI2Q96SN7 254 aa10.3□□□□□ -0.76
ITGB1-218ENST00000528877 STK26Q9P289 416 aa10.3□□□□□ -0.76
ITGB1-218ENST00000528877 EIF3AQ14152 1382 aaKnown RBP10.29□□□□□ -0.76
ITGB1-218ENST00000528877 TULP4Q9NRJ4 1543 aa10.29□□□□□ -0.76
ITGB1-218ENST00000528877 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
ITGB1-218ENST00000528877 CDK12Q9NYV4 1490 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-218ENST00000528877 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
ITGB1-218ENST00000528877 PRAM1Q96QH2 718 aa10.28□□□□□ -0.76
ITGB1-218ENST00000528877 DPYSL4O14531 572 aa10.27□□□□□ -0.77
ITGB1-218ENST00000528877 POTEAQ6S8J7 498 aa10.27□□□□□ -0.77
ITGB1-218ENST00000528877 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
ITGB1-218ENST00000528877 TOPAZ1Q8N9V7 1692 aa10.26□□□□□ -0.77
ITGB1-218ENST00000528877 ATP7BP35670 1465 aa10.26□□□□□ -0.77
ITGB1-218ENST00000528877 FOSBP53539 338 aa10.26□□□□□ -0.77
ITGB1-218ENST00000528877 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-218ENST00000528877 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
ITGB1-218ENST00000528877 MARF1Q9Y4F3 1742 aaKnown RBP10.26□□□□□ -0.77
ITGB1-218ENST00000528877 TNS3Q68CZ2 1445 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 ITSN1Q15811 1721 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 ABCA3Q99758 1704 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 TRPM3Q9HCF6 1732 aaPredicted RBP10.25□□□□□ -0.77
ITGB1-218ENST00000528877 PDIA6Q15084 440 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
ITGB1-218ENST00000528877 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.24□□□□□ -0.77
ITGB1-218ENST00000528877 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-218ENST00000528877 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
ITGB1-218ENST00000528877 MEX3CQ5U5Q3 659 aaKnown RBP10.24□□□□□ -0.77
ITGB1-218ENST00000528877 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
ITGB1-218ENST00000528877 ALS2Q96Q42 1657 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-218ENST00000528877 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 POGKQ9P215 609 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 AFF2P51816 1311 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 SPATA31A3Q5VYP0 1347 aa10.23□□□□□ -0.77
ITGB1-218ENST00000528877 FOXO3O43524 673 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 PHF14O94880 888 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
ITGB1-218ENST00000528877 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 TRAK1Q9UPV9 953 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 ARHGEF10O15013 1369 aa10.22□□□□□ -0.77
ITGB1-218ENST00000528877 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms