RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 RGPD5Q99666 1765 aa29.82■■■□□ 2.36
PKP3-205ENST00000527442 SPON1Q9HCB6 807 aa29.81■■■□□ 2.36
PKP3-205ENST00000527442 C11orf95C9JLR9 678 aaPredicted RBP29.8■■■□□ 2.36
PKP3-205ENST00000527442 NLRP6P59044 892 aa29.8■■■□□ 2.36
PKP3-205ENST00000527442 L3MBTL2Q969R5 705 aa29.8■■■□□ 2.36
PKP3-205ENST00000527442 KCNQ2O43526 872 aa29.79■■■□□ 2.36
PKP3-205ENST00000527442 CABP1Q9NZU7 370 aa29.79■■■□□ 2.36
PKP3-205ENST00000527442 YY1P25490 414 aa29.78■■■□□ 2.36
PKP3-205ENST00000527442 PPP1R1BQ9UD71 204 aaPredicted RBP29.78■■■□□ 2.36
PKP3-205ENST00000527442 DDB1Q16531 1140 aa29.77■■■□□ 2.36
PKP3-205ENST00000527442 NINLQ9Y2I6 1382 aa29.77■■■□□ 2.36
PKP3-205ENST00000527442 PTF1AQ7RTS3 328 aa29.76■■■□□ 2.35
PKP3-205ENST00000527442 ANO8Q9HCE9 1232 aaPredicted RBP29.76■■■□□ 2.35
PKP3-205ENST00000527442 CPSF1Q10570 1443 aaKnown RBP29.75■■■□□ 2.35
PKP3-205ENST00000527442 TOM1L2Q6ZVM7 507 aa29.75■■■□□ 2.35
PKP3-205ENST00000527442 TRPM1Q7Z4N2 1603 aa29.74■■■□□ 2.35
PKP3-205ENST00000527442 PLSCR1O15162 318 aa29.74■■■□□ 2.35
PKP3-205ENST00000527442 WDR17Q8IZU2 1322 aa29.72■■■□□ 2.35
PKP3-205ENST00000527442 AXIN2Q9Y2T1 843 aa29.72■■■□□ 2.35
PKP3-205ENST00000527442 MARCH10Q8NA82 808 aaPredicted RBP29.7■■■□□ 2.35
PKP3-205ENST00000527442 BCL11BQ9C0K0 894 aaPredicted RBP29.7■■■□□ 2.35
PKP3-205ENST00000527442 MYOM1P52179 1685 aa29.69■■■□□ 2.34
PKP3-205ENST00000527442 BCL9O00512 1426 aa29.68■■■□□ 2.34
PKP3-205ENST00000527442 PDGFDQ9GZP0 370 aaPredicted RBP29.67■■■□□ 2.34
PKP3-205ENST00000527442 NFAT5O94916 1531 aa29.66■■■□□ 2.34
PKP3-205ENST00000527442 ARHGEF25Q86VW2 580 aa29.65■■■□□ 2.34
PKP3-205ENST00000527442 PROM2Q8N271 834 aa29.65■■■□□ 2.34
PKP3-205ENST00000527442 EVC2Q86UK5 1308 aa29.65■■■□□ 2.34
PKP3-205ENST00000527442 TTC21BQ7Z4L5 1316 aa29.64■■■□□ 2.34
PKP3-205ENST00000527442 CDCA7Q9BWT1 371 aaPredicted RBP29.63■■■□□ 2.33
PKP3-205ENST00000527442 SOX12O15370 315 aa29.62■■■□□ 2.33
PKP3-205ENST00000527442 MON2Q7Z3U7 1717 aa29.62■■■□□ 2.33
PKP3-205ENST00000527442 DCAF8L1A6NGE4 600 aa29.61■■■□□ 2.33
PKP3-205ENST00000527442 NHSQ6T4R5 1651 aa29.6■■■□□ 2.33
PKP3-205ENST00000527442 ZBTB7AO95365 584 aa29.6■■■□□ 2.33
PKP3-205ENST00000527442 KCNH5Q8NCM2 988 aa29.6■■■□□ 2.33
PKP3-205ENST00000527442 CARD10Q9BWT7 1032 aa29.6■■■□□ 2.33
PKP3-205ENST00000527442 ABCC6O95255 1503 aa29.6■■■□□ 2.33
PKP3-205ENST00000527442 CSB-PGBD3P0DP91 1061 aa29.59■■■□□ 2.33
PKP3-205ENST00000527442 TNS2Q63HR2 1409 aa29.58■■■□□ 2.33
PKP3-205ENST00000527442 TTC21AQ8NDW8 1320 aa29.57■■■□□ 2.32
PKP3-205ENST00000527442 TXNRD1Q16881 649 aa29.57■■■□□ 2.32
PKP3-205ENST00000527442 USP54Q70EL1 1684 aa29.56■■■□□ 2.32
PKP3-205ENST00000527442 PTGER2P43116 358 aa29.56■■■□□ 2.32
PKP3-205ENST00000527442 ZNF692Q9BU19 519 aaPredicted RBP29.56■■■□□ 2.32
PKP3-205ENST00000527442 LTN1O94822 1766 aa29.54■■■□□ 2.32
PKP3-205ENST00000527442 CCDC7Q96M83 1385 aa29.54■■■□□ 2.32
PKP3-205ENST00000527442 STK32BQ9NY57 414 aa29.53■■■□□ 2.32
PKP3-205ENST00000527442 ATF5Q9Y2D1 282 aaPredicted RBP29.53■■■□□ 2.32
PKP3-205ENST00000527442 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
PKP3-205ENST00000527442 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
PKP3-205ENST00000527442 EXOC5O00471 708 aa29.52■■■□□ 2.32
PKP3-205ENST00000527442 ROCK2O75116 1388 aaKnown RBP29.52■■■□□ 2.32
PKP3-205ENST00000527442 SLC15A2Q16348 729 aa29.51■■■□□ 2.31
PKP3-205ENST00000527442 BTAF1O14981 1849 aa29.5■■■□□ 2.31
PKP3-205ENST00000527442 FHDC1Q9C0D6 1143 aaPredicted RBP29.45■■■□□ 2.31
PKP3-205ENST00000527442 CD163L1Q9NR16 1453 aa29.44■■■□□ 2.3
PKP3-205ENST00000527442 USP31Q70CQ4 1352 aa29.44■■■□□ 2.3
PKP3-205ENST00000527442 ACSBG1Q96GR2 724 aa29.44■■■□□ 2.3
PKP3-205ENST00000527442 ERBB3P21860 1342 aa29.44■■■□□ 2.3
PKP3-205ENST00000527442 CHD4Q14839 1912 aa29.43■■■□□ 2.3
PKP3-205ENST00000527442 SGIP1Q9BQI5 828 aa29.43■■■□□ 2.3
PKP3-205ENST00000527442 MTFR1LQ9H019 292 aa29.43■■■□□ 2.3
PKP3-205ENST00000527442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.42■■■□□ 2.3
PKP3-205ENST00000527442 SYT17Q9BSW7 474 aa29.42■■■□□ 2.3
PKP3-205ENST00000527442 NME9Q86XW9 330 aa29.4■■■□□ 2.3
PKP3-205ENST00000527442 NLRP2Q9NX02 1062 aa29.4■■■□□ 2.3
PKP3-205ENST00000527442 SBNO2Q9Y2G9 1366 aa29.39■■■□□ 2.3
PKP3-205ENST00000527442 KAT6BQ8WYB5 2073 aa29.39■■■□□ 2.3
PKP3-205ENST00000527442 ZNF784Q8NCA9 323 aaPredicted RBP29.38■■■□□ 2.29
PKP3-205ENST00000527442 IL2RBP14784 551 aa29.37■■■□□ 2.29
PKP3-205ENST00000527442 QSER1Q2KHR3 1735 aa29.36■■■□□ 2.29
PKP3-205ENST00000527442 UTRNP46939 3433 aa29.34■■■□□ 2.29
PKP3-205ENST00000527442 ZNF827Q17R98 1081 aa29.34■■■□□ 2.29
PKP3-205ENST00000527442 ANKRD24Q8TF21 1146 aa29.34■■■□□ 2.29
PKP3-205ENST00000527442 FAM208AQ9UK61 1670 aaKnown RBP29.34■■■□□ 2.29
PKP3-205ENST00000527442 TUBGCP6Q96RT7 1819 aa29.33■■■□□ 2.29
PKP3-205ENST00000527442 ARXQ96QS3 562 aa29.32■■■□□ 2.28
PKP3-205ENST00000527442 LRRC4BQ9NT99 713 aa29.31■■■□□ 2.28
PKP3-205ENST00000527442 COL24A1Q17RW2 1714 aa29.31■■■□□ 2.28
PKP3-205ENST00000527442 EDC4Q6P2E9 1401 aaKnown RBP29.3■■■□□ 2.28
PKP3-205ENST00000527442 MAP3K5Q99683 1374 aa29.3■■■□□ 2.28
PKP3-205ENST00000527442 TMC1Q8TDI8 760 aa29.29■■■□□ 2.28
PKP3-205ENST00000527442 DOT1LQ8TEK3 1739 aa29.28■■■□□ 2.28
PKP3-205ENST00000527442 CARD11Q9BXL7 1154 aa29.28■■■□□ 2.28
PKP3-205ENST00000527442 SLC12A5Q9H2X9 1139 aa29.27■■■□□ 2.28
PKP3-205ENST00000527442 A0A1W2PP64 1363 aa29.26■■■□□ 2.28
PKP3-205ENST00000527442 USP47Q96K76 1375 aa29.26■■■□□ 2.28
PKP3-205ENST00000527442 HDGFL2Q7Z4V5 671 aaPredicted RBP29.26■■■□□ 2.27
PKP3-205ENST00000527442 SHANK3Q9BYB0 1731 aa29.25■■■□□ 2.27
PKP3-205ENST00000527442 RGPD2P0DJD1 1756 aa29.25■■■□□ 2.27
PKP3-205ENST00000527442 LY75O60449 1722 aa29.24■■■□□ 2.27
PKP3-205ENST00000527442 AKT1S1Q96B36 256 aa29.23■■■□□ 2.27
PKP3-205ENST00000527442 EIF4G2P78344 907 aaKnown RBP eCLIP29.21■■■□□ 2.27
PKP3-205ENST00000527442 DDX54Q8TDD1 881 aaKnown RBP29.2■■■□□ 2.26
PKP3-205ENST00000527442 IP6K1Q92551 441 aa29.19■■■□□ 2.26
PKP3-205ENST00000527442 LTV1Q96GA3 475 aaPredicted RBP29.19■■■□□ 2.26
PKP3-205ENST00000527442 TERF2IPQ9NYB0 399 aa29.19■■■□□ 2.26
PKP3-205ENST00000527442 PNPLA7Q6ZV29 1317 aa29.19■■■□□ 2.26
PKP3-205ENST00000527442 SLC27A3Q5K4L6 730 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms