RNA–Protein interactions for RNA: ENST00000526388.1

LINC00958-202, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 607 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-202ENST00000526388 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
LINC00958-202ENST00000526388 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
LINC00958-202ENST00000526388 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
LINC00958-202ENST00000526388 L3MBTL2Q969R5 705 aa11.26□□□□□ -0.61
LINC00958-202ENST00000526388 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
LINC00958-202ENST00000526388 KRT27Q7Z3Y8 459 aa11.25□□□□□ -0.61
LINC00958-202ENST00000526388 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
LINC00958-202ENST00000526388 SPATA31A5Q5VU36 1347 aa11.25□□□□□ -0.61
LINC00958-202ENST00000526388 SPATA31A7Q8IWB4 1347 aa11.25□□□□□ -0.61
LINC00958-202ENST00000526388 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
LINC00958-202ENST00000526388 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
LINC00958-202ENST00000526388 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
LINC00958-202ENST00000526388 NBPF8Q3BBV2 869 aa11.24□□□□□ -0.61
LINC00958-202ENST00000526388 SIN3AQ96ST3 1273 aa11.24□□□□□ -0.61
LINC00958-202ENST00000526388 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
LINC00958-202ENST00000526388 USP6P35125 1406 aa11.24□□□□□ -0.61
LINC00958-202ENST00000526388 CLCN6P51797 869 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
LINC00958-202ENST00000526388 CHRNA2Q15822 529 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 USP19O94966 1318 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 SLIT3O75094 1523 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 CAMTA1Q9Y6Y1 1673 aa11.23□□□□□ -0.61
LINC00958-202ENST00000526388 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
LINC00958-202ENST00000526388 CPDO75976 1380 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 ZC3H6P61129 1189 aaKnown RBP11.22□□□□□ -0.61
LINC00958-202ENST00000526388 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 GSE1Q14687 1217 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 DEFB132Q7Z7B7 95 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
LINC00958-202ENST00000526388 STRN4Q9NRL3 753 aa11.22□□□□□ -0.61
LINC00958-202ENST00000526388 RGPD5Q99666 1765 aa11.21□□□□□ -0.61
LINC00958-202ENST00000526388 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.61
LINC00958-202ENST00000526388 SPATA31A1Q5TZJ5 1347 aa11.21□□□□□ -0.61
LINC00958-202ENST00000526388 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
LINC00958-202ENST00000526388 LRP5O75197 1615 aa11.2□□□□□ -0.62
LINC00958-202ENST00000526388 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
LINC00958-202ENST00000526388 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
LINC00958-202ENST00000526388 COL18A1P39060 1754 aa11.2□□□□□ -0.62
LINC00958-202ENST00000526388 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
LINC00958-202ENST00000526388 USP54Q70EL1 1684 aa11.19□□□□□ -0.62
LINC00958-202ENST00000526388 RREB1Q92766 1687 aa11.19□□□□□ -0.62
LINC00958-202ENST00000526388 LTN1O94822 1766 aa11.18□□□□□ -0.62
LINC00958-202ENST00000526388 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
LINC00958-202ENST00000526388 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
LINC00958-202ENST00000526388 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
LINC00958-202ENST00000526388 DISP2A7MBM2 1401 aa11.18□□□□□ -0.62
LINC00958-202ENST00000526388 BAG6P46379 1132 aa11.17□□□□□ -0.62
LINC00958-202ENST00000526388 EVA1CP58658 441 aa11.17□□□□□ -0.62
LINC00958-202ENST00000526388 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
LINC00958-202ENST00000526388 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
LINC00958-202ENST00000526388 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 NFAT5O94916 1531 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 PEAK1Q9H792 1746 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 ZBTB7CA1YPR0 619 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 GCP02774 474 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 LARP1Q6PKG0 1096 aaKnown RBP11.16□□□□□ -0.62
LINC00958-202ENST00000526388 CRB1P82279 1406 aa11.16□□□□□ -0.62
LINC00958-202ENST00000526388 NLRP6P59044 892 aa11.15□□□□□ -0.62
LINC00958-202ENST00000526388 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
LINC00958-202ENST00000526388 RGPD3A6NKT7 1758 aaPredicted RBP11.15□□□□□ -0.62
LINC00958-202ENST00000526388 RGPD4Q7Z3J3 1758 aa11.15□□□□□ -0.62
LINC00958-202ENST00000526388 AATKQ6ZMQ8 1374 aa11.15□□□□□ -0.63
LINC00958-202ENST00000526388 ABCC6O95255 1503 aa11.14□□□□□ -0.63
LINC00958-202ENST00000526388 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
LINC00958-202ENST00000526388 TCP11L2Q8N4U5 519 aa11.14□□□□□ -0.63
LINC00958-202ENST00000526388 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
LINC00958-202ENST00000526388 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
LINC00958-202ENST00000526388 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
LINC00958-202ENST00000526388 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
LINC00958-202ENST00000526388 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
LINC00958-202ENST00000526388 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
LINC00958-202ENST00000526388 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
LINC00958-202ENST00000526388 GABBR2O75899 941 aa11.12□□□□□ -0.63
LINC00958-202ENST00000526388 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
LINC00958-202ENST00000526388 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
LINC00958-202ENST00000526388 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
LINC00958-202ENST00000526388 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
LINC00958-202ENST00000526388 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
LINC00958-202ENST00000526388 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
LINC00958-202ENST00000526388 SOX12O15370 315 aa11.11□□□□□ -0.63
LINC00958-202ENST00000526388 TRIM37O94972 964 aa11.11□□□□□ -0.63
LINC00958-202ENST00000526388 THRAP3Q9Y2W1 955 aaKnown RBP11.11□□□□□ -0.63
LINC00958-202ENST00000526388 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
LINC00958-202ENST00000526388 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
LINC00958-202ENST00000526388 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
LINC00958-202ENST00000526388 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
LINC00958-202ENST00000526388 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
LINC00958-202ENST00000526388 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
LINC00958-202ENST00000526388 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
LINC00958-202ENST00000526388 A0A1W2PP64 1363 aa11.08□□□□□ -0.64
LINC00958-202ENST00000526388 APBA3O96018 575 aa11.08□□□□□ -0.64
LINC00958-202ENST00000526388 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
LINC00958-202ENST00000526388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00958-202ENST00000526388 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
LINC00958-202ENST00000526388 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms