RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TMUB1Q9BVT8 246 aa6.05□□□□□ -1.44
CSDE1-209ENST00000525132 DNMT1P26358 1616 aaKnown RBP6.05□□□□□ -1.44
CSDE1-209ENST00000525132 HECW1Q76N89 1606 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 NBPF26B4DH59 902 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 IRF6O14896 467 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 FAM98CQ17RN3 349 aaKnown RBP6.04□□□□□ -1.44
CSDE1-209ENST00000525132 GJD4Q96KN9 370 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-209ENST00000525132 PRDM6Q9NQX0 595 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 ZMYM3Q14202 1370 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 ABCA10Q8WWZ4 1543 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 BRWD3Q6RI45 1802 aa6.04□□□□□ -1.44
CSDE1-209ENST00000525132 GOLGB1Q14789 3259 aaKnown RBP6.03□□□□□ -1.44
CSDE1-209ENST00000525132 ARHGAP23Q9P227 1491 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 MINK1Q8N4C8 1332 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-209ENST00000525132 NUDT18Q6ZVK8 323 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 PACS2Q86VP3 889 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 CCDC102AQ96A19 550 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 FAM122AQ96E09 287 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 CAMKK2Q96RR4 588 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 COL25A1Q9BXS0 654 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-209ENST00000525132 NBPF3Q9H094 633 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 SEPT9Q9UHD8 586 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-209ENST00000525132 DLC1Q96QB1 1528 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 TMEM94Q12767 1356 aa6.03□□□□□ -1.44
CSDE1-209ENST00000525132 DIP2AQ14689 1571 aa6.02□□□□□ -1.45
CSDE1-209ENST00000525132 SMAPO00193 183 aa6.02□□□□□ -1.45
CSDE1-209ENST00000525132 FNBP4Q8N3X1 1017 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-209ENST00000525132 TMEM134Q9H6X4 195 aa6.02□□□□□ -1.45
CSDE1-209ENST00000525132 MED14O60244 1454 aa6.02□□□□□ -1.45
CSDE1-209ENST00000525132 KDM5DQ9BY66 1539 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 BIVM-ERCC5R4GMW8 1640 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 AMHR2Q16671 573 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 NBPF8Q3BBV2 869 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 NBPF14Q5TI25 921 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 ZFRQ96KR1 1074 aaKnown RBP6.01□□□□□ -1.45
CSDE1-209ENST00000525132 PNMA3Q9UL41 463 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 ATP10BO94823 1461 aa6.01□□□□□ -1.45
CSDE1-209ENST00000525132 MEGF6O75095 1541 aa6□□□□□ -1.45
CSDE1-209ENST00000525132 RCCD1A6NED2 376 aa6□□□□□ -1.45
CSDE1-209ENST00000525132 ZBTB7AO95365 584 aa6□□□□□ -1.45
CSDE1-209ENST00000525132 OATP04181 439 aa6□□□□□ -1.45
CSDE1-209ENST00000525132 PRKCSHP14314 528 aaPredicted RBP6□□□□□ -1.45
CSDE1-209ENST00000525132 LBX1P52954 281 aa6□□□□□ -1.45
CSDE1-209ENST00000525132 MRPL50Q8N5N7 158 aaKnown RBP6□□□□□ -1.45
CSDE1-209ENST00000525132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
CSDE1-209ENST00000525132 ABCA9Q8IUA7 1624 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 A2ML1A8K2U0 1454 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.99□□□□□ -1.45
CSDE1-209ENST00000525132 LCE2BO14633 110 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 THSD4Q6ZMP0 1018 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 KRT27Q7Z3Y8 459 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 PDGFDQ9GZP0 370 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-209ENST00000525132 CNTLNQ9NXG0 1405 aa5.99□□□□□ -1.45
CSDE1-209ENST00000525132 IQGAP1P46940 1657 aa5.98□□□□□ -1.45
CSDE1-209ENST00000525132 SOWAHBA6NEL2 793 aa5.98□□□□□ -1.45
CSDE1-209ENST00000525132 DNAJB2P25686 324 aa5.98□□□□□ -1.45
CSDE1-209ENST00000525132 CTCFP49711 727 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-209ENST00000525132 SEPT12Q8IYM1 358 aa5.98□□□□□ -1.45
CSDE1-209ENST00000525132 RBM46Q8TBY0 533 aaKnown RBP5.98□□□□□ -1.45
CSDE1-209ENST00000525132 MAP3K1Q13233 1512 aa5.98□□□□□ -1.45
CSDE1-209ENST00000525132 A2MP01023 1474 aa5.97□□□□□ -1.45
CSDE1-209ENST00000525132 ADCY9O60503 1353 aa5.97□□□□□ -1.45
CSDE1-209ENST00000525132 DHX57Q6P158 1386 aaKnown RBP5.97□□□□□ -1.45
CSDE1-209ENST00000525132 TRIM66O15016 1216 aa5.97□□□□□ -1.45
CSDE1-209ENST00000525132 REPIN1Q9BWE0 567 aaKnown RBP5.97□□□□□ -1.45
CSDE1-209ENST00000525132 SLC24A3Q9HC58 644 aa5.97□□□□□ -1.45
CSDE1-209ENST00000525132 SWT1Q5T5J6 900 aaKnown RBP5.96□□□□□ -1.46
CSDE1-209ENST00000525132 SAMD7Q7Z3H4 446 aa5.96□□□□□ -1.46
CSDE1-209ENST00000525132 ZNF775Q96BV0 537 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-209ENST00000525132 DISP2A7MBM2 1401 aa5.96□□□□□ -1.46
CSDE1-209ENST00000525132 SPHKAPQ2M3C7 1700 aa5.96□□□□□ -1.46
CSDE1-209ENST00000525132 CAMSAP2Q08AD1 1489 aa5.96□□□□□ -1.46
CSDE1-209ENST00000525132 AHDC1Q5TGY3 1603 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-209ENST00000525132 SZT2Q5T011 3432 aa5.95□□□□□ -1.46
CSDE1-209ENST00000525132 SLC10A3P09131 477 aa5.95□□□□□ -1.46
CSDE1-209ENST00000525132 NLRP7Q8WX94 980 aa5.95□□□□□ -1.46
CSDE1-209ENST00000525132 AK7Q96M32 723 aa5.95□□□□□ -1.46
CSDE1-209ENST00000525132 CACNA1GO43497 2377 aa5.95□□□□□ -1.46
CSDE1-209ENST00000525132 ABCC1P33527 1531 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 COL6A3P12111 3177 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 PPEF1O14829 653 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-209ENST00000525132 BCAMP50895 628 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 TPRNQ4KMQ1 711 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 PROSER2Q86WR7 435 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-209ENST00000525132 PARP9Q8IXQ6 854 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 ANKK1Q8NFD2 765 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 WNT2BQ93097 391 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 KCTD12Q96CX2 325 aaKnown RBP5.94□□□□□ -1.46
CSDE1-209ENST00000525132 DAXXQ9UER7 740 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-209ENST00000525132 AGLP35573 1532 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 EFCAB6Q5THR3 1501 aa5.94□□□□□ -1.46
CSDE1-209ENST00000525132 DEPDC5O75140 1603 aa5.93□□□□□ -1.46
CSDE1-209ENST00000525132 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.461e-9■□□□□ 10.9
CSDE1-209ENST00000525132 FAM182BQ5T319 152 aa5.93□□□□□ -1.46
CSDE1-209ENST00000525132 GRIN3BO60391 1043 aa5.92□□□□□ -1.46
CSDE1-209ENST00000525132 SUZ12Q15022 739 aaKnown RBP5.92□□□□□ -1.46
CSDE1-209ENST00000525132 LRCH3Q96II8 777 aa5.92□□□□□ -1.46
CSDE1-209ENST00000525132 FAM217BQ9NTX9 383 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-209ENST00000525132 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-209ENST00000525132 MSH6P52701 1360 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms