RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 SULT6B1Q6IMI4 303 aa19.75■□□□□ 0.75
BEST1-204ENST00000524926 PIK3C2AO00443 1686 aa19.74■□□□□ 0.75
BEST1-204ENST00000524926 AMPHP49418 695 aa19.74■□□□□ 0.75
BEST1-204ENST00000524926 PROSER2Q86WR7 435 aaPredicted RBP19.74■□□□□ 0.75
BEST1-204ENST00000524926 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
BEST1-204ENST00000524926 PDE3AQ14432 1141 aa19.73■□□□□ 0.75
BEST1-204ENST00000524926 AEBP1Q8IUX7 1158 aa19.73■□□□□ 0.75
BEST1-204ENST00000524926 PEAK1Q9H792 1746 aa19.73■□□□□ 0.75
BEST1-204ENST00000524926 CT47B1P0C2W7 299 aaPredicted RBP19.72■□□□□ 0.75
BEST1-204ENST00000524926 PSME1Q06323 249 aa19.72■□□□□ 0.75
BEST1-204ENST00000524926 THUMPD2Q9BTF0 503 aaKnown RBP19.72■□□□□ 0.75
BEST1-204ENST00000524926 SBNO1A3KN83 1393 aa19.71■□□□□ 0.75
BEST1-204ENST00000524926 FLT4P35916 1363 aa19.71■□□□□ 0.75
BEST1-204ENST00000524926 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
BEST1-204ENST00000524926 PANK1Q8TE04 598 aa19.71■□□□□ 0.75
BEST1-204ENST00000524926 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
BEST1-204ENST00000524926 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
BEST1-204ENST00000524926 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
BEST1-204ENST00000524926 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
BEST1-204ENST00000524926 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
BEST1-204ENST00000524926 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
BEST1-204ENST00000524926 FOXO3O43524 673 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 GNAI1P63096 354 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 HSPA2P54652 639 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 DCTN1Q14203 1278 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 SSH1Q8WYL5 1049 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
BEST1-204ENST00000524926 HOXC9P31274 260 aa19.64■□□□□ 0.74
BEST1-204ENST00000524926 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.74
BEST1-204ENST00000524926 ZKSCAN2Q63HK3 967 aa19.64■□□□□ 0.73
BEST1-204ENST00000524926 ARHGEF10O15013 1369 aa19.63■□□□□ 0.73
BEST1-204ENST00000524926 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
BEST1-204ENST00000524926 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
BEST1-204ENST00000524926 EYA1Q99502 592 aa19.63■□□□□ 0.73
BEST1-204ENST00000524926 RLBP1P12271 317 aa19.63■□□□□ 0.73
BEST1-204ENST00000524926 MARF1Q9Y4F3 1742 aaKnown RBP19.63■□□□□ 0.73
BEST1-204ENST00000524926 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
BEST1-204ENST00000524926 KDM2BQ8NHM5 1336 aa19.62■□□□□ 0.73
BEST1-204ENST00000524926 CFAP44Q96MT7 982 aa19.62■□□□□ 0.73
BEST1-204ENST00000524926 MBIPQ9NS73 344 aa19.62■□□□□ 0.73
BEST1-204ENST00000524926 ZNF853P0CG23 659 aa19.61■□□□□ 0.73
BEST1-204ENST00000524926 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
BEST1-204ENST00000524926 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
BEST1-204ENST00000524926 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
BEST1-204ENST00000524926 LMOD2Q6P5Q4 547 aa19.6■□□□□ 0.73
BEST1-204ENST00000524926 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
BEST1-204ENST00000524926 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
BEST1-204ENST00000524926 IGSF1Q8N6C5 1336 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 USP54Q70EL1 1684 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
BEST1-204ENST00000524926 ATF3P18847 181 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 NOB1Q9ULX3 412 aaKnown RBP19.59■□□□□ 0.73
BEST1-204ENST00000524926 ZBTB7CA1YPR0 619 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 ELL2O00472 640 aaPredicted RBP19.59■□□□□ 0.73
BEST1-204ENST00000524926 MS4A1P11836 297 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 MCM10Q7L590 875 aa19.59■□□□□ 0.73
BEST1-204ENST00000524926 ALDH1L2Q3SY69 923 aa19.58■□□□□ 0.72
BEST1-204ENST00000524926 SKAP1Q86WV1 359 aa19.58■□□□□ 0.72
BEST1-204ENST00000524926 KCNH5Q8NCM2 988 aa19.58■□□□□ 0.72
BEST1-204ENST00000524926 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
BEST1-204ENST00000524926 TSPYL6Q8N831 410 aa19.57■□□□□ 0.72
BEST1-204ENST00000524926 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
BEST1-204ENST00000524926 KDRP35968 1356 aa19.57■□□□□ 0.72
BEST1-204ENST00000524926 MTHFSDQ2M296 383 aaKnown RBP19.57■□□□□ 0.72
BEST1-204ENST00000524926 C1orf167Q5SNV9 1468 aa19.57■□□□□ 0.72
BEST1-204ENST00000524926 VAMP4O75379 141 aa19.56■□□□□ 0.72
BEST1-204ENST00000524926 TRIM27P14373 513 aa19.56■□□□□ 0.72
BEST1-204ENST00000524926 ATF7IPQ6VMQ6 1270 aa19.56■□□□□ 0.72
BEST1-204ENST00000524926 KRT28Q7Z3Y7 464 aa19.56■□□□□ 0.72
BEST1-204ENST00000524926 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
BEST1-204ENST00000524926 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
BEST1-204ENST00000524926 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
BEST1-204ENST00000524926 AAMPQ13685 434 aa19.55■□□□□ 0.72
BEST1-204ENST00000524926 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
BEST1-204ENST00000524926 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
BEST1-204ENST00000524926 IP6K1Q92551 441 aa19.55■□□□□ 0.72
BEST1-204ENST00000524926 KDM4FA0A1W2PPD8 638 aa19.54■□□□□ 0.72
BEST1-204ENST00000524926 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
BEST1-204ENST00000524926 IGHDP01880 384 aa19.54■□□□□ 0.72
BEST1-204ENST00000524926 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
BEST1-204ENST00000524926 LTN1O94822 1766 aa19.53■□□□□ 0.72
BEST1-204ENST00000524926 GAS2L2Q8NHY3 880 aa19.53■□□□□ 0.72
BEST1-204ENST00000524926 GCP02774 474 aa19.53■□□□□ 0.72
BEST1-204ENST00000524926 STRCP1A6NGW2 1772 aa19.53■□□□□ 0.72
BEST1-204ENST00000524926 NFAT5O94916 1531 aa19.52■□□□□ 0.71
BEST1-204ENST00000524926 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.71
BEST1-204ENST00000524926 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
BEST1-204ENST00000524926 CHL1O00533 1208 aa19.51■□□□□ 0.71
BEST1-204ENST00000524926 PCDHB15Q9Y5E8 787 aa19.5■□□□□ 0.71
BEST1-204ENST00000524926 BRPF1P55201 1214 aaPredicted RBP19.5■□□□□ 0.71
BEST1-204ENST00000524926 CADPS2Q86UW7 1296 aa19.5■□□□□ 0.71
BEST1-204ENST00000524926 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
BEST1-204ENST00000524926 KIF1AQ12756 1690 aa19.49■□□□□ 0.71
BEST1-204ENST00000524926 TMEM57Q8N5G2 664 aa19.49■□□□□ 0.71
BEST1-204ENST00000524926 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
BEST1-204ENST00000524926 MST1RQ04912 1400 aa19.49■□□□□ 0.71
BEST1-204ENST00000524926 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms