RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 RRP9O43818 475 aaKnown RBP22.7■■□□□ 1.22
PCDHB18P-201ENST00000524813 RIMS2Q9UQ26 1411 aa22.7■■□□□ 1.22
PCDHB18P-201ENST00000524813 ANKRD45Q5TZF3 282 aa22.7■■□□□ 1.22
PCDHB18P-201ENST00000524813 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
PCDHB18P-201ENST00000524813 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
PCDHB18P-201ENST00000524813 UBR1Q8IWV7 1749 aa22.69■■□□□ 1.22
PCDHB18P-201ENST00000524813 ARHGEF28Q8N1W1 1705 aaKnown RBP22.68■■□□□ 1.22
PCDHB18P-201ENST00000524813 K7ELQ4 463 aaPredicted RBP22.68■■□□□ 1.22
PCDHB18P-201ENST00000524813 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
PCDHB18P-201ENST00000524813 TBC1D9Q6ZT07 1266 aa22.67■■□□□ 1.22
PCDHB18P-201ENST00000524813 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
PCDHB18P-201ENST00000524813 RIMS1Q86UR5 1692 aaKnown RBP22.66■■□□□ 1.22
PCDHB18P-201ENST00000524813 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
PCDHB18P-201ENST00000524813 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
PCDHB18P-201ENST00000524813 SSFA2P28290 1259 aa22.65■■□□□ 1.22
PCDHB18P-201ENST00000524813 ALKQ9UM73 1620 aa22.65■■□□□ 1.22
PCDHB18P-201ENST00000524813 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.22
PCDHB18P-201ENST00000524813 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.21
PCDHB18P-201ENST00000524813 GAS2L2Q8NHY3 880 aa22.64■■□□□ 1.21
PCDHB18P-201ENST00000524813 STK26Q9P289 416 aa22.64■■□□□ 1.21
PCDHB18P-201ENST00000524813 DIAPH1O60610 1272 aaKnown RBP22.63■■□□□ 1.21
PCDHB18P-201ENST00000524813 MED14O60244 1454 aa22.63■■□□□ 1.21
PCDHB18P-201ENST00000524813 SRPK2P78362 688 aaKnown RBP22.63■■□□□ 1.21
PCDHB18P-201ENST00000524813 FYB1O15117 783 aa22.62■■□□□ 1.21
PCDHB18P-201ENST00000524813 CCDC173Q0VFZ6 552 aa22.61■■□□□ 1.21
PCDHB18P-201ENST00000524813 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
PCDHB18P-201ENST00000524813 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
PCDHB18P-201ENST00000524813 NASPP49321 788 aaPredicted RBP22.6■■□□□ 1.21
PCDHB18P-201ENST00000524813 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
PCDHB18P-201ENST00000524813 NRXN3Q9Y4C0 1643 aa22.59■■□□□ 1.21
PCDHB18P-201ENST00000524813 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
PCDHB18P-201ENST00000524813 PPP1R9BQ96SB3 815 aa22.59■■□□□ 1.21
PCDHB18P-201ENST00000524813 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
PCDHB18P-201ENST00000524813 CLEC17AQ6ZS10 378 aa22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 PTPRMP28827 1452 aa22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 BAG4O95429 457 aaKnown RBP22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 KLHL40Q2TBA0 621 aa22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 ZNF428Q96B54 188 aa22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 DDX49Q9Y6V7 483 aaKnown RBP22.58■■□□□ 1.21
PCDHB18P-201ENST00000524813 TPM2P07951 284 aa22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 SIRT2Q8IXJ6 389 aa22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 MRPL50Q8N5N7 158 aaKnown RBP22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 TMEM2Q9UHN6 1383 aa22.57■■□□□ 1.2
PCDHB18P-201ENST00000524813 CDC45O75419 566 aa22.56■■□□□ 1.2
PCDHB18P-201ENST00000524813 VAMP4O75379 141 aa22.56■■□□□ 1.2
PCDHB18P-201ENST00000524813 FCHSD2O94868 740 aa22.56■■□□□ 1.2
PCDHB18P-201ENST00000524813 ARHGAP45Q92619 1136 aa22.56■■□□□ 1.2
PCDHB18P-201ENST00000524813 PNPLA6Q8IY17 1366 aa22.56■■□□□ 1.2
PCDHB18P-201ENST00000524813 ANP32BQ92688 251 aaKnown RBP22.55■■□□□ 1.2
PCDHB18P-201ENST00000524813 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
PCDHB18P-201ENST00000524813 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
PCDHB18P-201ENST00000524813 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
PCDHB18P-201ENST00000524813 IBTKQ9P2D0 1353 aaPredicted RBP22.55■■□□□ 1.2
PCDHB18P-201ENST00000524813 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
PCDHB18P-201ENST00000524813 PTCH1Q13635 1447 aa22.54■■□□□ 1.2
PCDHB18P-201ENST00000524813 ZSCAN30Q86W11 494 aa22.54■■□□□ 1.2
PCDHB18P-201ENST00000524813 ADAMTSL3P82987 1691 aa22.53■■□□□ 1.2
PCDHB18P-201ENST00000524813 LRRC7Q96NW7 1537 aa22.53■■□□□ 1.2
PCDHB18P-201ENST00000524813 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
PCDHB18P-201ENST00000524813 PKNOX2Q96KN3 472 aa22.53■■□□□ 1.2
PCDHB18P-201ENST00000524813 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
PCDHB18P-201ENST00000524813 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
PCDHB18P-201ENST00000524813 CD163L1Q9NR16 1453 aa22.52■■□□□ 1.2
PCDHB18P-201ENST00000524813 MINK1Q8N4C8 1332 aaPredicted RBP22.52■■□□□ 1.2
PCDHB18P-201ENST00000524813 GSPT1P15170 499 aaKnown RBP22.52■■□□□ 1.19
PCDHB18P-201ENST00000524813 KIAA1211Q6ZU35 1233 aa22.52■■□□□ 1.19
PCDHB18P-201ENST00000524813 ZMYND15Q9H091 742 aa22.52■■□□□ 1.19
PCDHB18P-201ENST00000524813 MCTP1Q6DN14 999 aa22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 ABCC4O15439 1325 aa22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 RABEP1Q15276 862 aa22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
PCDHB18P-201ENST00000524813 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
PCDHB18P-201ENST00000524813 PHACTR3Q96KR7 559 aa22.49■■□□□ 1.19
PCDHB18P-201ENST00000524813 NCLP19338 710 aaKnown RBP22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 ZNF445P59923 1031 aa22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 HDGFL2Q7Z4V5 671 aaPredicted RBP22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 PLEKHM2Q8IWE5 1019 aa22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 LTKP29376 864 aa22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 METP08581 1390 aa22.48■■□□□ 1.19
PCDHB18P-201ENST00000524813 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 NUCB2P80303 420 aa22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 AK9Q5TCS8 1911 aa22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 OFD1O75665 1012 aa22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
PCDHB18P-201ENST00000524813 HMOX1P09601 288 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 FBLN1P23142 703 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 CEP170BQ9Y4F5 1589 aaPredicted RBP22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 GNAI1P63096 354 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 ZSCAN23Q3MJ62 389 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 LMBRD1Q9NUN5 540 aa22.46■■□□□ 1.19
PCDHB18P-201ENST00000524813 CYP2E1P05181 493 aaPredicted RBP22.45■■□□□ 1.18
PCDHB18P-201ENST00000524813 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms